Lonchura striata (white-rumped munia): 110469824
Help
Entry
110469824 CDS
T05897
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110469824 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110469824 (CNOT2)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110469824 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110469824 (CNOT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110469824
NCBI-ProteinID:
XP_021384634
LinkDB
All DBs
Position
1A:complement(29374427..29457173)
Genome browser
AA seq
552 aa
AA seq
DB search
MFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGASLYGQQS
ALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPMNPRNMM
NHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGFGMNRNQ
AFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAGRAPYVG
MVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLSTSGKTSSSTDGPKFPGD
KSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASSPCRPQDIGKREITIKFNLTICKLYKFTCLNSCIN
SDSFLDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRD
WRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLP
STFNYNPAQQAF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcttcaaggaagaagtttgtagagggggttgatggtgactaccatgatgag
aacatgtactacagccaatcatcaatgttcccacatcggtcagaaaaagatatgctggca
tcaccatcaacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgaggggaatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtaacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccgagcagggggatattgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcccagcaggacaaacagcatgagcagt
tcagggttaggcagccctaacagaagctctccaagcataatatgtatgccaaagcagcaa
ccctctcgacaaccttttactgtgaacagtatgtctggatttgggatgaacagaaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaa
aatgtgacaggactggacctctcagattttccagcactagcagacagaaacagaagggaa
ggaagtggcaatccaactccattaataaaccctttagctggaagggcaccctatgttgga
atggtaacaaaaccagcaagtgagcagtcccaggacttttcaatacacaatgaagatttt
ccagcattaccaggctccagctacaaagatccaacatctagtaatgatgacaataaatct
aatttgagtacatcaggcaaaacatcatccagcacagatgggcccaagtttcctggagat
aaaagttcgactacgcaaaacaacaaccagcagaaaaaagggatccaggtgttacctgat
ggccgggttaccaacattcctcaagggatggtgacggaccagtttggaatgattggcttg
ttaacattcatcagggcagcagagacagatccaggaatggtacatcttgcattaggaagt
gatttaacaacattaggtctcaatctcaactctcctgaaaatctttatcccaaatttgca
tccccatgggcatcgtcaccttgtcgacctcaagacataggtaagagagaaataactatt
aaattcaatcttactatttgcaaattatataaatttacatgtcttaatagttgcatcaat
tccgattcttttttagacttccatgttccatctgaatacttaactaacattcacattagg
gataagctggctgcaataaaacttggccgatatggagaagatctcctgttttatctctat
tacatgaatggaggagatgtattacagctattagcagcagtagagctatttaatcgggat
tggagataccacaaagaagaacgagtatggatcaccagggcacccggcatggagccaaca
atgaaaaccaatacgtacgagaggggaacatattacttctttgactgtcttaactggagg
aaagtagctaaggagttccacctggaatatgacaaattagaagaaaggcctcatctgcca
tcaaccttcaactacaaccctgctcagcaagccttctaa
DBGET
integrated database retrieval system
