Lonchura striata (white-rumped munia): 110469831
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Entry
110469831 CDS
T05897
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04010
MAPK signaling pathway
lsr04020
Calcium signaling pathway
lsr04144
Endocytosis
lsr04510
Focal adhesion
lsr04540
Gap junction
lsr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110469831 (PDGFRA)
04020 Calcium signaling pathway
110469831 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110469831 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
110469831 (PDGFRA)
04540 Gap junction
110469831 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110469831 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110469831 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lsr04090
]
110469831 (PDGFRA)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
110469831 (PDGFRA)
Protein kinases [BR:
lsr01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
110469831 (PDGFRA)
CD molecules [BR:
lsr04090
]
Proteins
110469831 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
Ig_6
Adeno_E3_CR1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
110469831
NCBI-ProteinID:
XP_021384694
UniProt:
A0A218VEQ8
LinkDB
All DBs
Position
4:complement(44821275..44857740)
Genome browser
AA seq
1096 aa
AA seq
DB search
MENSRLLAAMGTYPQTFLILGCFLTGPFLTFCQLPLPTIVPNRNEMVVQLYSNFTLKCSG
DSEVSWQYPVTEGNHRIDIRHEENNSGFFVTVLEVGNASAAHTGLYVCYYNHTQVEDGEV
EGKDIYIYVPDPDMPFVPSIPEDQFILVEEGDPAVIPCRISDPDAQVTLVNNLDKPVHAL
YDTKQGFIGNFPAGSYMCKTMVKGVEFKSDEFLIYIIRATSQLPVEIEALKTVYKTGETI
VVTCVVFDNEVVNLQWNYPGKVKEKGLIKLDDIKVPSQKLVYTLTIPEASVKDTGDYECT
ARHATKEVKENKKVAITVHDKGFVHLEPQFSPLEAVNLHEVKNFVVDVQAYPAPKMYWLK
DNVTLIENLTEIVTTSGRVQETRFQSILKLIRAKEEDSGYYTLVAENEDEIKRYTFSLLI
QVPALISALVDDHHGSAGGQTVRCLAEGTPLPDVEWLVCKDIKKCNNDTSWTLLTNNISD
IHMEAHLDEKNMVESQVTFQKVEETLAVRCVARNDLGAVTRELKLVAPTLRSELTVAAAV
LVLLVIVIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRD
GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHL
GPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLNRHPEKPKKDLDIFGMN
PADESTRSYVILSFENTGEYMDMKQADTTQYVPMLERKEGSKYSDIQRSVYDRPASYKKK
SMSESEVKNLLSDDSSEGLSLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKI
VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSL
GGTPYPGMMVDSTFYNKIKSGYRMAKPDHATNEVYEIMVKCWNSEPEKRPSFYHLSEIVE
SLLPGEYKKSYEKIHLDFLKSDHPAVTRMRGDCDNAYIGVTYKNEDKLKDRESGFDEQRL
SADSGYIIPLPDIDPVSEDELGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMM
DDIGIDSSDLVEDSFL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggagaattccaggttgttggcagctatgggtacttacccacagacattcctgatcctg
ggatgtttcctcacaggaccattcctaacattttgccagcttcctctgccaactattgtt
cccaataggaatgaaatggtggtacagctgtattccaatttcacactcaaatgctctgga
gacagcgaagtgagctggcagtacccagtgaccgagggaaaccacaggatagacattaga
cacgaagagaacaacagtggcttctttgtgacagtgctcgaagtaggaaatgcctcggct
gcccatacgggcttgtatgtttgctactataaccacacacaagtggaggatggggaggtg
gaagggaaggacatctacatctatgtgcctgacccagacatgccttttgttccttctata
ccagaagaccagttcatcctagtagaagaaggtgatcctgcagttatcccttgtcggata
agtgacccagatgctcaagtgactttagttaacaatttagacaagcctgtgcatgcttta
tatgacaccaaacaaggcttcatagggaattttcctgcgggctcatacatgtgcaaaaca
atggttaaaggcgtggagttcaagtctgatgagttcctcatctatatcataagagctact
tcacagctgcctgttgaaattgaagctcttaaaactgtctacaaaacaggcgagaccatc
gtagtaacttgtgtggtctttgacaatgaggtggttaatttacagtggaattatcctggg
aaagtgaaagaaaaaggtctgataaaacttgatgatatcaaagtgccatcgcagaagctg
gtttacaccctgaccattcctgaggcatcagtgaaagacacaggcgattatgaatgtacc
gctcggcatgcaaccaaggaggttaaggaaaataagaaagtagccattacagttcatgac
aaaggctttgttcacctggagcctcagttcagccctctggaagctgtcaacctgcatgaa
gtcaaaaactttgttgttgatgtgcaggcttacccagcaccaaaaatgtactggttgaag
gataatgtaactctgattgaaaatcttacagagattgttactacatcaggaagagtccag
gaaacgaggtttcagagtattttaaaattgatacgggccaaggaggaagacagtggatac
tacactttggttgctgaaaatgaagatgagattaaaagatacaccttctcattgctcata
caagttccagctctgatctcagccctcgtggatgatcaccatggctctgcaggtgggcag
acagtgagatgcttggcagaaggaaccccacttcccgatgtggaatggctggtttgcaag
gacattaaaaagtgcaacaatgacacctcttggacccttttgactaacaatatctctgat
atacatatggaagcccacttggatgagaaaaatatggtggaaagccaggtgaccttccag
aaggtagaggaaaccctggctgtgcgatgtgtggcaaggaatgacctcggtgctgttact
cgagaactgaagcttgtggctcccaccttgaggtcagagctaacagtggctgctgctgtc
ttagtgctgttagtgatcgtgataatttccctgattgtcctggttatcatatggaaacag
aagccaaggtatgagatcagatggagagtcattgagtctatcagccctgatggccacgag
tacatttatgtggacccaatgcaactgccttatgactccagatgggagtttcctcgagat
gggttagtgcttggtcggatccttggttcgggagcatttggaaaagtagttgaagggact
gcatatggattgagtcgctctcaaccggtgatgaaagtagctgtgaaaatgctgaaacct
acagctagatccagtgaaaaacaggcactcatgtctgaactgaaaataatgacacatctt
ggcccccacttgaatattgtgaatctgcttggagcttgtacaaaatcaggtcctatttat
atcattactgaatattgtttttatggcgatttggtgaactacctgcataagaatagggac
aatttcctgaaccgacacccagaaaagcctaaaaaagatttggatatctttgggatgaac
cctgctgatgaaagcacaagaagctatgtgatactatcgtttgaaaacactggagaatac
atggacatgaaacaagctgataccactcagtatgtgccaatgctggaaaggaaggagggc
tctaaatattctgatattcagagatctgtgtatgatcggcctgcttcgtataagaagaaa
tccatgtcagaatcagaagtcaaaaaccttctttcagatgatagttcagagggcctcagc
ctactggatttgctgagcttcacctaccaggttgcacggggaatggaattcttggcttct
aagaattgtgtgcaccgtgacttggccgctcggaatgtcctcctggctcaaggaaaaatt
gtgaagatctgtgactttgggctggctagagacatcatgcatgattccaactatgtctcc
aagggcagtactttcctcccagtaaaatggatggcacctgaaagtatttttgacaacctg
tacacaacattaagtgatgtctggtcttatggcattctgctgtgggaaatattttctctt
ggtggcacaccgtatcctggcatgatggtcgattctactttctacaataagatcaagagt
ggatatcgaatggccaaacctgatcatgctaccaatgaagtgtatgagattatggtgaag
tgctggaacagtgaaccagagaaaagaccttctttctatcatttgagtgaaattgtggag
agcttgttgcctggagagtacaaaaagagctatgagaagattcatctggacttcctgaaa
agtgaccacccagctgtcacacgcatgagaggggactgtgacaatgcctacattggtgta
acttacaagaatgaagacaagctaaaggacagggagagtggatttgatgagcagaggctg
agtgctgacagtggatacatcattcccctgcctgacattgaccctgtttcagaagatgaa
cttggcaaaagaaacagacacagttcacagacatctgaagaaagtgccattgaaactggt
tccagtagctctaccttcatcaagagagaggacgagaccattgaggacattgacatgatg
gacgacattgggatcgactcctcagacctggtggaggacagcttcctgtaa
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integrated database retrieval system