Lonchura striata (white-rumped munia): 110469903
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Entry
110469903 CDS
T05897
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110469903
03036 Chromosome and associated proteins [BR:
lsr03036
]
110469903
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110469903
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110469903
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110469903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110469903
NCBI-ProteinID:
XP_021384794
LinkDB
All DBs
Position
6:complement(2603504..2614805)
Genome browser
AA seq
714 aa
AA seq
DB search
MPEATRCSSSSGAESGSDCSMDTEGVPESGRRRHKKEKKEKKSKRRDKFQRGKTQTDDSE
ESAEERYAPKAKKSKSVSKQNGHTKEESLEKSRLSSFSSKSSRKSRQSSSSDTSSDSESE
SEQDQELTGEQKEGAFSNFSISKETVQLLQARGVTYLFPVQVKTFNPVYAGKDVIAQART
GTGKTFSFAIPLIEKLQGDSQERRRGRPPKVLVLCPTRELANQVAKDFKDITRKLTVACF
YGGTPYNGQIDLMRSGIDILVGTPGRIKDHLQNGKLDLTKVKHVVLDEVDQMLDMGFAEQ
VEDILRVAYKKDSEDNPQTLLFSATCPHWVYDVAKKYMKSRYEQIDLIGKRTQKAATTVE
HLAIECHWSQRAAVIGDVIQVYSGSHGRTIVFCETKKEANELALNASIKQDCQSLHGDIP
QKQREITLKGFRNGSFKVLVATNVAARGLDIPEVDLVVQSSPPKDVESYIHRSGRTGRAG
RTGICICFYQRKEEYQLRHVEQKAGITFKRVGVPTATDIIKASSKDAMRCLDSVPQTAIE
YFRESAQLLIKEKGPVNALAAALAHISGATSIEQRSLLNSDVGFVTMILRCSEEINNMSY
AWRRLREVLGDDVDRKVNRMCFLKGKMGVCFDVPVAEQKEIEARWEDSKHWRLCVATELP
ELVESARGGGGGGGSGGGNGRSFSSSRNGRRGGSGRNRFRSRGQKRSFSRAFEH
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggccacccggtgcagcagcagcagcggggccgagtcgggctccgactgctcc
atggacactgagggggtcccggagagcggccgccggcggcacaagaaggagaaaaaggag
aagaaatctaaacgccgtgacaagtttcaaaggggaaagactcagacagatgacagcgag
gagtcggctgaggagcgctatgccccgaaagccaagaaatcaaagagtgtcagcaaacag
aacggtcacacgaaagaggaaagcctggagaaatcgagattgtcctccttcagcagcaaa
tcctcccgcaaaagccgacagagtagttctagtgacacgtcaagcgacagcgaaagtgag
agcgagcaggatcaggagttgactggagaacagaaggagggtgctttctccaatttttct
atttccaaagaaactgtccagcttcttcaagctcgaggagtgacatacctgttccctgtg
caagtgaagaccttcaatccagtgtatgctggcaaggatgtcattgctcaagcacgaact
ggaacagggaaaacattctcttttgctattcccttaattgaaaagcttcagggagactca
caggaaagaagaagaggccgtccaccaaaggttctagttctttgtccaacaagagagctg
gcaaatcaggttgccaaagatttcaaggatatcacaaggaagctgacagtggcttgtttt
tatggaggaactccctataacggacaaattgacctcatgagaagtggcattgacattttg
gttgggacacctggtcgaatcaaagaccacctgcagaatggcaagctggaccttaccaag
gtcaaacacgttgtacttgatgaagttgaccagatgctggacatgggatttgctgagcaa
gtggaagacattttacgagttgcatacaagaaggattctgaagacaatccccagacactg
ctgttttctgcgacttgcccacactgggtgtatgatgtggctaagaaatacatgaagtct
agatatgaacagattgaccttattgggaaaagaactcagaaggctgctacaacagtagaa
catttggcaatagagtgtcactggtctcagagagctgcagttattggagatgtcattcag
gtctacagtggcagccatgggaggaccattgtcttctgtgagaccaaaaaggaggcaaat
gaactggctttgaatgcttcaatcaaacaggattgccagtcattgcatggtgacattcct
cagaagcagagagagatcacactgaagggttttagaaatggttcatttaaagttctggtt
gcaaccaatgtagctgcccgtggtttagatatcccagaagttgacctggttgtacaaagc
tcaccaccaaaggatgtggagtcctacatccatcgctcggggcgcacaggccgagctggg
cgcactgggatctgcatctgcttctaccagcggaaggaggaataccagctgagacacgta
gagcaaaaggcgggcattacattcaagcgcgttggtgttcctactgcaacagacataata
aaggcttccagcaaagatgccatgaggtgcctggattctgttcctcagactgctattgag
tatttcagagaatctgctcagttgctaataaaagaaaagggaccagttaatgctctggct
gcagctctggcccatatttcgggtgctacttccattgaacagcgctcactgctgaactcg
gatgtgggatttgttacaatgatactacgctgctctgaagagataaacaacatgagctat
gcctggcgaagactgcgagaagtgttgggtgatgatgttgatcggaaggtgaacagaatg
tgtttcctcaagggaaaaatgggtgtgtgctttgatgttcctgtggcagagcaaaaagaa
atagaggcaaggtgggaagattcaaaacactggcgtttgtgtgtggccactgaattacca
gagctggtagaatccgcacgaggaggaggaggaggaggagggagtggtggaggaaatggc
cgaagcttctcaagctccaggaacggtcggcgtgggggctctggtagaaacagattcagg
agcagaggccagaaacgaagtttcagccgagcgtttgaacattaa
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