Lonchura striata (white-rumped munia): 110470034
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Entry
110470034 CDS
T05897
Symbol
ATM
Name
(RefSeq) serine-protein kinase ATM isoform X1
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03440
Homologous recombination
lsr04068
FoxO signaling pathway
lsr04110
Cell cycle
lsr04115
p53 signaling pathway
lsr04210
Apoptosis
lsr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110470034 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
110470034 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110470034 (ATM)
04210 Apoptosis
110470034 (ATM)
04115 p53 signaling pathway
110470034 (ATM)
04218 Cellular senescence
110470034 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lsr01001
]
110470034 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110470034 (ATM)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110470034 (ATM)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110470034 (ATM)
Enzymes [BR:
lsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110470034 (ATM)
Protein kinases [BR:
lsr01001
]
Serine/threonine kinases: Other
PIKK family [OT]
110470034 (ATM)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110470034 (ATM)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
110470034 (ATM)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
Check point factors
Other check point factors
110470034 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
TTI1
Motif
Other DBs
NCBI-GeneID:
110470034
NCBI-ProteinID:
XP_021385049
LinkDB
All DBs
Position
1:complement(73314146..73370973)
Genome browser
AA seq
3066 aa
AA seq
DB search
MSLALHDLLVCCRRLENEKAVERRKEIENFKQLLRDSETVLQLDRNSDSKQAKQLNWDAV
FSVLQKYFQKELKNLQLTKPNASASTQTARQKKIQEFGSLVKYFIRCANKRGPRLKCQEL
LIYVMEIIRDPISCAAYGSDCSSILLKDIVSVRKYWCEISQQQWSELLTLYGHLYFKPSG
SINRVLVARIIHTLTRGYCFQTDGLCSDMLAFFSKAMQSARQERNIAGLDHIVGAMNILC
NKFADNCRMRICKVGEEILPTVLYIWTQYRPKDSLKESIIELFRLQVHIHHPKGAKSQGR
AAYDLTRWQSILHNLYDLLVNEINLISSRGKYSSGSRNIAVKENLIELMADICHQVFTED
TKVLEITQSYAVSQRESSEDTVSNKRRRIELGWGSIRDNVQRSQKDFDVIPWLQITSQLI
SKYPTSIPSSELPALLNVLHQLLPQQRRGERTPYVLKCLTEVALCQNQRTDLKSTQKLEL
QRTWAKIWTLTIRSVSLQQIEVESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAAC
CLSLVMSAYSVPENLDIGIEQNISESNLGSVLREAIMKWLLSSNLEEEIDECAELPPVLL
SDFPHLVLQKILVSLTMKNCRASMMFFQNDAKCEQHVQGKEENSFSHVEELYLQTTFDEM
DIFTNFGVNVADKNVTGSRLAINQNLRETLENCLLAMSEKLLSSCGPKSKAVAAEHLARC
VSLLVGVLGCYCYTGIFKEEDACKSALFQNAKSLIHYAGEPISQHKNKLNEDTSINTLRT
LIMQCTKCLCNCTKNSANKMLSNLFLRLLTSKFMNDLIDICKNLMTVTGKPSVLGEVDLR
NDPEESMMEVDNQASDGLFDDHSVTDISDTNESGDMQTVTGALSPLAEEQLTKQDLLLLE
IVRFLCICVTTVQVQTLSFRASDIRRRLLMLTEGSVFDSAKPLHLHMYLILLKELPMEEH
FLPAVDVDTLLKPLSNVCSLYRRDQEVCKVILNNLLPIAAGLAQLEEPTEEARIAKGQFL
TVVGAFWQLSQGGKCTASVRVALLNCMKTLLEVDPHCKWAILNVKNKDLPVSDAFPHFLA
DSHHQVRILAAKSITSLFQDVKQRDSSGMSRPLPLKLQQKAFENAYLRVQEGMSNLVRGD
TSPEDLLDKQSNGKAVLLLLITMVLCCSPVCEKQALFAICQSVKENGLEPHLVKKVLKKV
SDIFGYKSIEDFMTSHLDYLVMEWLKINDTGYSLSAFPYVLLNYASLEEFYRSCYKVLVP
HLVIRSQFEDVKSLANKIEKDWRQVLADCFPKLLVNILPYFAYQSHEKSEVAEQRAMASK
VYDVLKDENCLGKQQMDSLSHSNLPEIVVELLMTLHEPAGTTVEEGSDLSKYISELDPAP
NPPHFPSYVIKATLDHISNCHKSKLKSIVAVLSKSPDSFQKILLALCKHASDTKNMYKKH
RVLTIYHLFVGLLLKEIKDSLGGAWAFVLRDVIYTLIHHINSRPIVIRDISMRSFSLCCD
LLHHVCHTAVTCCSDALETHLRVIVGTLIPLAMDQSQIQEQVLGLLKYLVIDNKDNESLY
QAIKCLDPFPEYPAFKDLRATQQKIKYSKGPYSLLEEINHFLSAGVCDSLPLTRLEGLYD
LRKKLEQYKDQMKDLLKIFQEKPEDSVIVKLVVSLLQLSKMAVNHTGEKAVLEAVGSCLG
EIGPMDFSTTALQRTENALDSRAAGLFEDRKLQCVFIMLIQINTALTDNCIGVRAAAVSC
LKNILATKSGNEFWEIYKSKADPMLIYLQPFRTSRKKCLVVSANDTEASSETLDDTNLWI
PLGETHETWIKHLTSTILDSGGVKNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDSEE
SWRNLLSLHIQKFFTACCKFASSSRCTPSSDSDQETHNFRSLDKVSRRAMLAVVDYLRRQ
KRSVSGTVFDDSFWLDLNYLEVAIAAQSCAAHFTALLYAEIYADKINRDKQQERSSFKAA
KRLTFEEESQRTPITTLNEKSKEETGLSLQDVLMDIYRSIGEPDSLYGCGGGRMLQPLAR
IRTYEHEAVWEKALVTYDLETSLSPSTRQAGIIEALQNFGLCHTLSMYLKGLEHENSEWC
AELQEIRYQAAWRNMQWSHISSVKDEAGFPGYHESLYDALQSLRDKEFSAFHDSLKDARV
NEVEELCKGSLESVYSLYPTLCRLQLIGELENAGLLFSRSVTAQQLNDVYLKWQRQSQLL
KDSDFHFQEPVMALRTVILEILLEKESENTKRECIKDLLTKHLVELSRLARIAKNTQLPE
RAMFQIKQHNPNGNGVSEWQLEEAQVFWAKKEESLALNILKTMIKKLDADWFQVENDPHL
KLMYTECLRLCGTWLAETCLENPTVIMQKYLEKAVEIAASHSGDSSDELKKGKMKAFLSL
ARFSDNQYQRIENYMKSSEFENKQALLKKAKEEVGLIRERRVQTNRYTVKVQRELELDEG
AIQALTEDRNRFLCKAVENYISCLLSGEEHDMWIFRLCSLWLENSGVDRVNEMMKKNAQK
IPSYKFLPLMYQLAARMGTKMMDSLGFHEVLNNLMSQISLDHPHHALFIILALANADKDE
RLTKPDTIRRNKLTKNAPKEISQLDVERMEAASMIMNIVRKRRAPMVRDIEALCDAYITL
ANLDATPWKSQRKGINIPADQPIIKLKNLEDVAVPTMEIKVDPTGQYENLVTISFFKREF
RLAGGINLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFQMCNTLLQQNTETRKRKL
NIRRYKVVPLSQRSGVLEWCSGTIPIGEYLVNAEEGAHKRYRPKDYTAHQCQKIMLDAQK
KHSEEKYRIFMEVCENFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGD
RHDQNILIDEQTAELVHIDLGVAFEQGKILPIPETVPFRLTRDIVDGMGITGVEGVFRRC
CEKTMAVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPADEADMSSTLGTDPQE
PKRKASSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLYH
GWKSWE
NT seq
9201 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcattacatgatctgctggtttgttgtcgtcgccttgaaaatgagaaagct
gtggagcgaaggaaggaaattgaaaatttcaagcaacttctccgtgattctgaaacagtt
ctccagctggaccggaattctgattctaaacaagcaaagcaactcaactgggatgctgta
tttagtgtcttgcagaaatatttccagaaagaacttaaaaacctgcaactgacaaaacca
aatgcatctgcttcaacccaaactgcaagacagaaaaaaatacaagaatttggaagtttg
gtcaaatatttcatcagatgtgccaataaacgaggacccagactgaaatgtcaggaactt
ctgatttatgtcatggaaataataagagatccaataagttgtgctgcttatggttctgac
tgtagtagtatactgctaaaggatatcgtctcagtaaggaaatattggtgtgagatatcc
cagcagcagtggtcagagttgctgaccctctatggccatttatacttcaaaccttcaggg
agcattaatagagtcttagtggctaggataattcatacacttacaagagggtactgcttc
caaactgatgggttgtgttctgacatgcttgccttcttttcaaaagcaatgcagtctgca
aggcaggagaggaatattgcaggcctggatcatattgttggagcaatgaatatcctctgc
aacaagtttgctgacaactgtcgcatgcggatttgcaaagtaggggaagaaattttgcct
acagtgctttacatatggactcagtatagaccaaaggattccctgaaagaatcaataatt
gagttatttcgtctccaagttcatattcatcatccaaagggtgcaaaatctcagggaaga
gctgcatatgacttaacaaggtggcaaagcatcttacataacctgtatgatctgctggtg
aatgaaataaatctcatcagtagccgtgggaagtattcttcaggctcacgtaatattgct
gtaaaggaaaatttaattgagttaatggctgatatttgtcatcaggtttttacagaggat
accaaagtccttgaaattacccagtcctatgctgtttcacaaagagagtccagtgaggac
acggtgtcaaacaagcgcaggaggattgagcttggctggggttccattcgagataatgtg
caaagatcccagaaggattttgatgtcataccttggttacagattacaagtcagctaata
tccaagtatcccacgagtattcctagcagtgagctacctgccttactcaatgtccttcac
cagttactgcctcagcagcgccgaggagaaaggactccgtacgtgctgaagtgtctcaca
gaggtagctttgtgtcaaaaccagagaactgatttgaaaagcacccagaagctggagctc
cagagaacctgggcaaagatctggactcttaccattcgcagcgttagccttcagcaaatt
gaagtggagagctttgggctgcttggagctatgattcaagggaaccttgttgtaacagat
aaagaactctggaaaatattttcaggacctgcatgcaaaccttcaagttctgctgcatgt
tgtttatcattagtgatgtctgcctactcagtgccagaaaatttggacataggaatcgaa
cagaatatttctgagagtaatctgggttctgtgctaagggaggcaataatgaaatggctc
ctgtccagcaatttggaggaagaaatagatgaatgtgcagagttacctcctgtgctcctc
agtgattttcctcatcttgtattacaaaaaattcttgtgagccttacgatgaagaactgc
agagcctccatgatgtttttccaaaatgatgctaaatgtgagcagcatgtgcaagggaaa
gaagaaaatagtttttctcatgttgaagagctgtacctgcagactacatttgatgaaatg
gatattttcactaactttggagtaaatgttgcagataaaaatgtgactggttcaagactt
gccatcaaccaaaatcttagggaaacactggagaactgccttttagcaatgtcagaaaag
cttttaagcagttgtggtcctaagtctaaggctgttgctgctgagcaccttgcgcgatgt
gtcagtctcttggttggtgttctgggttgctattgctacaccggtatttttaaagaggag
gatgcctgtaagtcagcgttgttccagaatgctaagtctctcattcattatgctggagaa
cccatttcccaacataaaaacaaactaaatgaagatacgtcgatcaacacactgaggact
ttgataatgcagtgtacaaaatgtttgtgcaattgtaccaagaacagtgctaataagatg
ctgtctaatctattcctgcgtttgttaacatcaaaatttatgaatgatctgatagatatt
tgcaagaatctgatgacagttactggaaagccaagtgtactgggagaagtggatctcaga
aatgatcctgaggagagtatgatggaagtagataaccaggcatctgatggtttgtttgat
gatcattcagtgactgacatcagtgatacaaatgaatctggtgacatgcaaactgtaaca
ggtgctttgagcccattggctgaagaacagttgacaaagcaggatttacttctccttgaa
attgtgaggttcttgtgtatttgtgtaactacagtccaagttcagacgctgagcttccga
gcctctgatattcggaggaggctgttaatgctgactgaaggcagtgtctttgacagcgct
aagccgctgcatctgcacatgtacttgatcctgttgaaggagcttcctatggaagaacac
ttcttgcctgcagtcgatgttgatacgcttcttaagcctctttctaacgtgtgttctttg
tatcgtcgagatcaagaagtttgtaaagtaatcctaaataatttgctccctatagcagca
gggttggcccagttagaagaacctactgaagaggcaaggattgccaaaggacagtttttg
acagttgttggagccttctggcaattatctcaaggagggaaatgcacggcatcagtaaga
gtggcccttttaaattgcatgaaaaccctgcttgaggttgatcctcattgcaagtgggca
atccttaatgtgaaaaataaagatctgcctgtgagtgatgctttcccacatttccttgca
gacagtcaccatcaagttcgaattcttgctgcaaagtcaattaccagtttgtttcaagat
gtgaaacagagagattcttctggaatgtcaagacctcttcccctgaagcttcagcaaaag
gcttttgagaatgcatacctcagagttcaggaaggaatgagcaatctggtcaggggtgat
acaagtcctgaagatcttttggacaaacaaagtaatggaaaagcagttttgctgttgctt
ataaccatggttctgtgctgcagcccagtctgtgaaaagcaagctctgtttgctatttgc
cagtctgtgaaagagaatggattagagcctcaccttgtgaaaaaggttttgaaaaaagtg
tctgacatttttggctataaaagtatagaagacttcatgacatcacatttagactatttg
gtgatggagtggctgaaaataaatgacactggatacagcctgtctgcatttccttatgtt
cttctgaactatgctagccttgaggagttctacaggtcttgttacaaagttttggttcca
cacctggtgattagaagtcagtttgaagatgtgaaatcacttgccaacaagattgagaag
gattggagacaagttctggcagactgctttccaaagttacttgtcaatatcctcccgtac
tttgcctatcaaagccatgaaaagagtgaagtagcagagcaaagagcaatggcttctaaa
gtctatgatgtgcttaaggatgaaaactgcttaggaaaacagcaaatggacagtttatct
catagtaacttgccagagattgtggttgaactgctgatgactttacatgaaccagctggc
accacagttgaagaagggtctgatctaagtaaatatataagtgaactggatcctgctcct
aatccacctcattttccatcttacgtgattaaggcaaccttggaccatattagcaactgt
cataaaagcaagttaaaaagtattgtagcagttctttctaaaagccctgattcattccag
aagatccttctagctctctgtaagcatgcatcagatacaaaaaacatgtataagaaacac
agagttcttacaatttatcacttgtttgttggtctgttacttaaagagatcaaagacagt
ttaggaggtgcctgggcttttgtcctccgagatgtaatttacaccctgattcaccacatc
aacagcagacccatcgtaatcagagacatatctatgcgcagcttttctctctgctgtgat
cttctgcatcatgtttgccacacagcagttacatgttgcagtgatgctctggagactcac
cttcgtgttattgtaggaaccctgatacctcttgccatggaccagtctcagattcaggag
caggtcctaggattattgaagtacctggtgatagataataaggataatgaaagtctgtac
caagcaatcaagtgcttagatccttttcctgaatacccagcttttaaagatttgagagca
actcaacagaaaataaaatacagtaaaggaccatattctcttttggaggaaattaatcac
tttctctcggctggggtttgtgattcactgcccttaacacggcttgaaggactgtatgat
ttacgcaaaaagttggaacagtataaagatcagatgaaggatctcctgaaaattttccag
gaaaagccagaagattctgtaatagtgaaattggtagtgagcttactgcagctgtccaag
atggcagttaaccatacaggagaaaaagcagtactggaggctgttggaagttgcttggga
gaaataggtcccatggatttctccaccactgctcttcagcgtactgaaaatgcactggat
tctagagcagcaggtttatttgaagatagaaaacttcagtgtgtcttcataatgttaatt
caaataaacactgctttaacagataattgtattggtgttagagctgctgctgtttcctgt
ttgaagaacatactagccaccaagtctggcaatgaattttgggaaatttataaaagtaaa
gctgatcccatgttaatctatctacagcctttcagaacatctaggaaaaagtgtcttgta
gtgtctgctaatgatacagaggcttcttcagaaacactggatgacacaaacctgtggatt
cctctgggagaaactcatgagacctggatcaagcacctaactagtacaatattggacagt
ggaggtgtgaaaaatgaagttctccagttgatgaagccactctgtgaggtgaaaacagac
ttgtgtcaaactttgcttccgtacttgattcatgatattcttcttcatgactcagaagaa
tcttggagaaatcttttgtcacttcatatccagaagttttttacagcctgttgcaaattt
gcctcttctagtagatgtactccaagttctgattcagatcaagaaacccataattttaga
agcttggataaagtatctcgaagagccatgcttgctgttgttgattacctgagaagacaa
aagagatctgtttcaggcacagtttttgatgacagcttctggctagatctgaattatctg
gaggttgctatagcagcacagtcttgtgctgctcacttcacagccttgctctacgcagaa
atctacgcagacaagataaatagggacaagcagcaagaaagatcttcttttaaagcagct
aagcgtttgacatttgaagaggaaagtcaaagaacacctattactactttgaatgagaaa
agtaaagaagaaactggcctaagtttgcaggatgttctcatggacatctatagaagcatt
ggagaacctgacagcctttatggctgtggtggaggaagaatgttgcagccattggcacgg
ataagaacatatgagcatgaagcagtatgggagaaagcccttgtaacatatgaccttgag
acaagcctctctccatctactcgccaggcaggaataatagaggctttgcagaattttggg
ctttgccacactctttccatgtacttaaaagggctggaacatgaaaacagtgagtggtgt
gcagaactccaggaaatacgctatcaggcagcatggaggaatatgcagtggagccacatc
tcttctgtcaaagatgaagcaggatttccaggctaccatgaatcactgtatgatgctctt
cagtctctacgagataaggaattctctgctttccatgacagtcttaaagatgccagggtg
aatgaagtagaagagctgtgcaagggcagtcttgagtctgtttattcattatacccaacc
ctttgcagactacagctaattggagagttggaaaatgcaggtctgctgttctccagatct
gttactgctcaacaactgaatgatgtttacttgaaatggcagagacagtcccagcttctc
aaagacagcgacttccatttccaggaacctgtcatggctctgcgcactgtaattttggaa
atcttgcttgaaaaggagagtgaaaacactaaaagagaatgtattaaagacctcttgacc
aagcatctagtggagctctctagattggcaagaattgctaaaaatactcagcttccggaa
agagctatgtttcaaatcaaacaacacaatccaaatggaaatggagtttctgaatggcaa
cttgaagaagctcaggttttctgggctaaaaaggaagagagtcttgcactgaatatactt
aaaacaatgataaaaaaattagatgcagattggtttcaggtcgagaatgatcctcacctg
aaattgatgtatacagagtgcctgaggctctgcggaacctggttagcagaaacatgcttg
gaaaaccctacagtcatcatgcagaaatacttagaaaaggctgtggaaattgctgcaagc
cacagtggtgacagcagtgatgagctgaagaaaggaaagatgaaggctttcctctccttg
gctcgtttctctgataatcagtaccagcgaattgagaattacatgaaatcctcagagttt
gaaaataaacaggcattgctgaagaaggccaaggaggaagtcggtctgatcagggagcgt
agagttcagaccaacagatacacagtgaaggttcagcgagaactagagctggatgaaggg
gcaatacaagccctgaccgaggatcgtaaccgcttcttgtgtaaagcagtggagaactac
atcagctgtttactaagtggagaagaacatgatatgtggatattccgactctgttccctc
tggcttgaaaattctggagttgacagagtcaatgaaatgatgaagaaaaacgcacagaag
atcccttcatacaagttcttgcctctgatgtaccagctggctgctcgaatgggaactaag
atgatggatagtttaggatttcatgaagttctgaataatctaatgtctcaaatttcactg
gatcatccacatcatgctttgtttataatactggctttggctaatgctgacaaagatgaa
cgcctcacaaaaccagatacaataagaagaaataagttaactaaaaatgcaccaaaagag
atctcccagcttgatgtggagagaatggaagctgccagcatgataatgaatattgtaagg
aaaagacgagctcctatggttagagacattgaagcactttgtgatgcttacatcacatta
gcaaatttagatgctactccatggaaatctcaaagaaaaggaataaatattccagctgac
cagccaatcattaaactgaagaacttggaggatgttgctgttcctaccatggaaattaag
gtggatcccacaggacagtatgaaaatttggtgacaataagttttttcaagcgagaattt
cgtttagcaggaggcattaatctgcctaaaataatagattgtgtaggatcagatggtaaa
gaaaggaggcagctggttaaggggcgtgatgacctgagacaagatgctgtcatgcaacaa
gttttccagatgtgcaatacattgctccagcaaaacactgaaacacgaaagaggaaatta
aatatccgaagatacaaggtggttcccctttctcagagaagtggagttctggagtggtgc
tcaggaacaattcccattggagagtaccttgtgaatgctgaagaaggagctcacaagaga
tacaggccaaaggattacacagctcatcagtgtcaaaaaataatgctggatgcccaaaag
aaacattctgaagagaaatacagaatcttcatggaagtctgtgagaattttcaacctgtg
ttccggtatttctgcatggagaaattcctggacccagcagtgtggtttgaaaaacgattg
gcatacactcgcagtgtggctacatcttctatagttggctacattcttgggcttggagac
agacatgatcagaatatcttgatagatgaacaaacagcagaactggtgcatatagatctg
ggggttgcttttgagcaaggcaaaatccttcccataccagagactgttccatttaggtta
accagggacattgtggatggaatgggtatcaccggtgtggaaggggtcttcagaagatgc
tgtgagaaaacaatggctgttatgagaaattctcaagaagctttgttgactattgtagaa
gtgctgctctatgatcctctttttgactggaccatgaaccccttgaaagctttgtatttg
cagcagaggccagcagatgaggctgacatgagctctacacttggtactgatccacaggag
cctaaaagaaaagccagcagtgacgaccagagttttaacaaggtggctgagcgtgttctg
atgagacttcaggagaagctgaaaggtgttgaggagggaacagtgctcagtgtgggaggg
caggtgaacctcctcatacaacaggccatggaccctaaaaatctgagccgtctctatcat
ggatggaaatcctgggagtga
DBGET
integrated database retrieval system
