Lonchura striata (white-rumped munia): 110470050
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Entry
110470050 CDS
T05897
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110470050 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110470050 (FIP1L1)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110470050 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
110470050
NCBI-ProteinID:
XP_021385114
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Position
4:complement(45176700..45215977)
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AA seq
553 aa
AA seq
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MSTGEAERLSADADGAAGDEEEEWLYGDENEAERPEEEKSSAPPPPGSEEEAAENGIVKT
KVAEAEDDSDSDSDDDEDDVQVTIGDIKTGAPQFSYGAAPVNLNIKAGGRAYGSSGAKVK
GLDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKITAEDKAMEVRPSAEILDGRYHLLKVQQGRTGNLEKELAVQSTKPDF
TSPPALFKSGIPTNRRISGTIDVIGQTITISRVEGRRRANENSNIQVLSERSNPEVDSFT
KPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGGPPPSLI
PTIDSGHSSGYDGRPVRAFSYGSVTFPHPAGSAPSWSSLLDTSKQWDYYARREKDRERER
ERSRDRDRDRDRDRDRDRDRTRDRERDRDHSPSSSAFNSDEERYRYRDYAERGYDRHRTS
REKEDRHRDRRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASGEP
APEQENTEAAPVE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccggcgaggcggagcggttgtcggcggacgccgatggggccgccggggacgag
gaggaggagtggctctatggcgatgaaaatgaagcagagagaccagaggaagaaaaatct
agcgctccacccccgcctggaagtgaagaggaagctgcagaaaatggcattgtaaaaacg
aaagtggcagaggctgaggatgacagtgatagtgatagtgatgatgatgaagatgatgtt
caagtcaccataggggatattaagacaggagctccacagtttagttatggagcagcacct
gtgaatctcaatattaaggcaggaggacgagcttatggatcttctggtgcaaaagttaaa
ggactggatctagatgcaccagggagtattaatggtgtgccacttctggaagtagattta
gattcttttgaagataaaccttggaggaagccaggggctgatctctcagattattttaac
tatggcttcaatgaagatacctggaaagcttactgtgaaaaacaaaagagaatacgaatg
ggtcttgaaattttgccagttacctcaaccacaaataaaattacggctgaagacaaagct
atggaagtaagaccaagtgcagagattctcgatggcagataccatcttttaaaggtacag
caaggcagaactggaaatttggagaaagagttggcagtgcagtcgaccaaacctgatttc
acatctcctcctgccttattcaaatcaggaattccaacaaacaggcgaatatctggcaca
atagatgtgattggacagaccatcactatcagcagggtggaaggacgacggcgtgctaat
gaaaacagcaacatacaggttctttcagaacgctctaatcctgaagtagacagttttacc
aagccacctccatttttccctccaggagctccacctactcaccttccaccacctcctttc
ctcccaccccctccaactgtcagtactgctccacctctgattcccccaccaggtatacca
ataacagtgccaccaccagggtttccaccaccacctggaggtcctccaccttccctcata
cccacaatagacagtggacattcttctggctatgatggtcgtcctgttcgtgcattttca
tatggcagtgtcacctttccacaccctgcaggttctgcaccctcatggtctagtcttttg
gacaccagcaaacagtgggattactatgcacgaagagagaaggatagggaacgtgagaga
gagagatcccgagatcgggatcgcgaccgggaccgggatcgagacagagatcgagaccgt
accagagacagggaaagggaccgagatcacagtccatcctcaagtgcattcaacagtgat
gaagaacgctacagatacagagactatgcagagaggggttatgaccgccataggacaagc
agagagaaagaagacagacacagagacaggagacacagagagaaagaagagactcgacac
aagtcatctcgaagtaacagcagacgtcgtcacgacagtgaagaaggggatagccacaga
aggcacaaacacaagaagtcgaaaagaagcaaagaaggaaaagaagccagtggtgaacct
gctcctgaacaggaaaacactgaagctgcccctgtggaatag
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