Lonchura striata domestica (Bengalese finch): 110470065
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Entry
110470065 CDS
T05897
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110470065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110470065
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110470065
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110470065
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
110470065
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
110470065
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
110470065
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
110470065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_N
POPLD
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
110470065
NCBI-ProteinID:
XP_021385088
LinkDB
All DBs
Position
2:129703060..129724791
Genome browser
AA seq
1060 aa
AA seq
DB search
MRSAGAWVSTCVGGGRAASERRVGAGAELRGCTARRPLPASSRYRGSATPPEMSGAREKK
RAKKMRNQPASVTLPAEPGPFAGGGSRACPTPGDVRSEQQQQKFSNQSSGPSYRKDQNFS
KGQNRGERGRGRGGWQGGHPSVSEEMPKYITVSTFAQARAAEISAMLKAVSQKSSNSLVF
QTLPRHMRRRAMSHNVKRLPRRLQEMARKEAEKAVHQKKEQSKTKCRKARRRHINLVAEF
NHRQRKNIWLETHIWHAKRFHMVKKWGYCLGNSPTEKSYRACYRAMTKQCLLQDLSYYCC
LELKGKENELLKQLARICSIDTGLTFQEASCLSGRFEGSLNLYRADRYPEDMLGPVTFIW
KPRDGSENRQLWIWVHPALKQDILRELKAIFQCSEPEEICISEPVTTSIQEEEQVEVMSL
GNKRKKEDKEGEKAVPVKKIIGDGTRDPFQSYSWISQTTGITISDRSMEILRYRLIGPLS
HSVLTETLKAAPVQTEMADSETGLNNWWVENCKDSEKVSLHQCQSAVFELLEGLSSPSDM
PPGTILGLTVGDPRVNLPKKKTKAMPDFEKYQDNDEVRQLYLKGVPADCAHSFIWDHDIC
KNVTENKISEQDLNHMRAQLLIPGSHLDLGPCESKIPILLVQQPGKMAGEDRPGWGSGWD
ICLPKGWGMAFWIPFIYQGVRVGGLQEALKHSEYQRTPHTPNDFPDCRAGMQFAKELETS
LLEKFKRRPPAKRANYVKLGTLSPFICPWGQLTKNWEERMKASGGLLCPSSPHPDCCTTE
GQTLCDPKAEVVRKASPENGEAEETMEITSSEGALKTEDVTSTQDFGERDETKTSDFIVL
RSEKLLMQLSAWCYPTAGKDRRIRLISRLGQKEMTEDVFLPILMSYPRALIWVNLSLLRK
GNPELHAMICIPTEDDLLHLSKDKLFCGPQEPKHRDIFKDKVQKQKEEKKKKKKDNVKSL
ESDPAGIPDEEATEDHEDFILGLWSDALPDVTSHCSRTVLGYVTRGDFSLAVGCGEALGF
VSLTGLIYMLHNQPADKKGLVLLRTPASLQYRFARLNIEV
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtgccggggcgtgggtgtccacgtgtgtcggtggaggccgcgccgcgagtgag
cgccgcgtcggggctggtgccgagctccgcggctgcaccgcccgccgaccgctgcccgcc
tcttcccgctacagaggctccgcaaccccgccggagatgtctggggcgcgggagaagaag
cgagccaagaagatgaggaaccaaccggccagcgtcacgctgcccgcggagccggggccc
ttcgccggcggcgggagcagagcctgcccgaccccaggagatgttcgttctgagcagcag
cagcagaaattttcaaatcagtcatctgggccttcttacaggaaagaccaaaatttttca
aaggggcaaaatagaggagagagaggcagaggaagaggaggatggcaaggaggacaccca
agtgtatctgaggaaatgccaaaatacataacagtgtctacctttgcccaagctcgtgct
gctgagatcagtgccatgttgaaagcagtttcacagaagtcttccaactctctggttttc
cagaccctccctaggcacatgcggaggcgagcaatgagtcacaatgtgaaacgcctaccc
aggcggctccaagagatggccaggaaagaggcagagaaagctgtacatcagaaaaaggaa
cagtcaaagactaaatgccgcaaagctagaagacgccacataaatttggtagcagagttt
aatcacaggcaaagaaagaatatttggctggaaacccatatttggcatgcaaagagattt
catatggtaaagaaatggggatactgtttaggaaacagccctacagagaagagctacagg
gcttgttaccgagccatgacaaagcaatgccttcttcaggacttatcatattattgttgc
ttggagttgaagggtaaagagaatgagcttctgaagcaacttgctcgaatatgtagcatt
gacacaggattgacatttcaagaggcttcttgcctgtctggaagatttgagggttccctg
aatctttatcgagcagatcgctatcctgaggatatgcttggtcctgttacatttatttgg
aaacccagggatgggtctgaaaacagacagttgtggatctgggtgcatccagctctcaag
caggacatactgagggagttaaaagcaatttttcagtgttcagaacctgaagaaatctgt
atttctgagcctgttacaacatcaattcaagaggaagaacaagtggaagttatgagcctt
ggcaataaaagaaagaaggaggataaagaaggagaaaaggctgtgccagtgaaaaaaata
attggtgacggcactagagatccattccagtcctactcttggatctcacagactactggc
attacaatcagtgacagaagcatggagattctcagataccgactgattggcccattatca
cactctgtccttacagagaccctgaaggcagctcctgtccaaacagagatggcagattca
gaaacaggactgaataactggtgggtagaaaactgcaaggactctgaaaaagtctctctc
catcaatgtcaaagtgctgtctttgagctattggaagggttaagctcaccatcagatatg
ccaccaggtacaatacttggcctcacagttggagatcctcgagtcaatttgccaaaaaag
aagacaaaagccatgccagactttgaaaaataccaagataatgatgaagttaggcagctg
tacctgaagggtgtacctgcagactgtgctcacagctttatctgggaccacgacatctgt
aagaacgtcactgaaaataaaatctcagagcaggatttaaaccatatgagagctcagtta
ctgatacctggatcacaccttgatttgggtccttgtgagtctaagattcccatactgttg
gtgcagcagccagggaaaatggctggagaagatcgaccaggatgggggagtggctgggat
atctgtctcccaaagggctggggcatggctttctggattccttttatatatcaaggtgta
cgagttggtggcttgcaagaggcattaaagcattctgaataccaaagaacacctcacact
cccaatgatttcccagactgccgggcaggaatgcagtttgctaaagaactggaaacgagt
cttcttgaaaaattcaaacgacgtccacctgcaaaaagggcaaattatgtcaagctgggc
actctgtctcctttcatctgtccttgggggcagctgaccaagaactgggaagaaagaatg
aaagcttcaggaggacttttatgtccttcttccccacaccctgactgctgcacaactgaa
gggcagaccctttgtgaccccaaagcagaagtggtcagaaaagcttcccctgagaatggt
gaggcagaggagaccatggaaataacaagttctgaaggtgccctgaagacagaggatgtt
acaagcacccaagattttggtgagagagatgaaactaagacaagtgactttattgttctc
aggagtgagaaactactaatgcagctgtcagcctggtgttaccccactgctgggaaagat
cggcgaatccgcctcatttctcggctgggacagaaggaaatgactgaagatgtttttttg
ccaattttgatgagctacccaagggctctcatctgggtcaatttgtcactcttgagaaag
gggaaccctgaattacatgccatgatttgcatcccaacagaagatgacttgctgcatcta
agcaaagacaaactcttctgtggtccacaagaacccaagcatcgtgacatattcaaggac
aaggtacagaagcaaaaagaggagaagaagaagaagaaaaaggataatgtgaagtcccta
gagagtgaccctgcaggcattccagatgaggaagcaactgaggaccatgaagacttcatt
cttggtctttggtcagatgctctcccagatgttacttcccactgctccagaactgtcttg
gggtatgtcactagaggggatttttcattggctgtaggctgtggagaagcactgggtttt
gttagcttgactgggttaatttatatgttacacaaccagccagcagataagaaagggctt
gttttgttaaggactccagcatctttacagtacaggtttgcaagacttaatattgaggtt
taa
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