Lonchura striata (white-rumped munia): 110470151
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Entry
110470151 CDS
T05897
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110470151 (PRDM8)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110470151 (PRDM8)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110470151 (PRDM8)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110470151 (PRDM8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_2
Zf-C2H2_ZNF451_C
DUF5810
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
110470151
NCBI-ProteinID:
XP_021385252
UniProt:
A0A218UR49
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Position
4:3590807..3594734
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AA seq
612 aa
AA seq
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MEDAGVQRGIWDGDAKTVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSAREREEQNLEAYIKSGQLFYRSLRRI
AKDEELLVWYGKELTELLLLGPARAPARTNGSPPFACPECSQRFQFELPFAAHLRFRCPK
RLHGPDIGPAAEAAAAAAKDGAGKEQEPGKFGKPGGPPHHPFPGPDGGPAASTKPSTDFH
NLARELENSRGGRAGSPGRPAPPEGGPEAAAGKAKRRFPEEEERGPGAARGRFPAERPGL
PAAPKEEPGCAPQQQYRAAGSYCGLEEGGRLFAPPSPETGEAKRSAFVEVKKAARGPEPD
GGPEEGPERGSPGAGGAEPGLCPRGGAGGPLAARLDGGSPARGSAFSTVPQLGAGPGGPG
GGGADERKSAFSQPARSFPHVPPLVLGPKLGGLGEPCPDGAAAPARLYAAEALAAKLPGG
GEAAGGGGGGGGGLPKQSPFLYTTAFWPKSSAAAAVAAAAAGPLQLQLPSALTLLPPSFT
SLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYALEPLVKRRREEKLKCPICNESFRE
RHHLSRHMTSHN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccggcgtccagcggggaatatgggacggggatgccaagacggtccagcag
tgcttgactgacatttttaccagcgtttacaccacctgcgacatcccggaaaatgccatt
ttcggcccctgcgtcctgagccacacgtccctgtatgacagcatcgcctttatcgccctc
aagtccaccgacaagcgcaccgtcccctacatattccgggtggacacgtcggcggccaac
ggctcgtcggaggggctgatgtggctgcggctggtgcagtcggcgagggagcgggaggag
cagaacctggaggcctacatcaagagcgggcagctcttttatcgctccctacgccgcatc
gccaaggacgaggagctgctggtgtggtacgggaaggagctcaccgagctgctgctgctc
ggcccggcccgggcccccgcccgcaccaacggctcgccgcccttcgcctgccctgagtgc
agccagcgcttccagttcgagctgcccttcgccgcccacctccggttccgctgcccgaag
aggctgcacggccccgacatcggccccgccgccgaggccgccgcagccgccgccaaggac
ggcgccggcaaggagcaggagcccggcaagttcgggaagcccggcgggccgccgcaccac
cccttccccgggcccgacggcggccccgccgccagcaccaagccctccacggacttccac
aacctggctcgggagctggagaactcccgcggcgggcgcgccgggtccccgggtcggccg
gcgccccccgagggtggccctgaggcggcggccgggaaggcgaagcggcgcttccccgag
gaggaagagcgcgggcccggcgcggcgcggggccgcttcccggcggagcggccggggctg
ccggcggcgcccaaggaggagccgggctgcgccccgcagcagcagtaccgcgccgccggc
tcctactgcgggctcgaggagggcggacgcctcttcgcaccgcccagcccggagaccggc
gaggccaagcgcagcgccttcgtggaggtgaagaaggcggcccgcggccccgagcccgac
ggcggccccgaagagggcccggagcgcggctccccgggcgcgggcggcgcggagccgggg
ctgtgcccccgcggcggcgcggggggcccgctggccgcccgcctggacggcggcagcccg
gcgcgggggagcgccttcagcacggtgccgcagctcggggccggccccggggggcccggc
ggcggcggggccgacgagagaaaaagcgccttctcgcagcccgcccgctccttcccgcac
gtcccgccgctggtgctgggtcccaagctgggcgggctgggcgagccctgccccgacggc
gccgccgcccccgcccgcctgtacgccgccgaggcgctggccgccaagctgccgggcggc
ggggaggcggcgggcggcggcggcggcggcggcggggggctgcccaagcaaagccccttc
ctctacaccacggccttctggcccaagagctcggcggcggcggcggtggcggcggcggcg
gcggggccgctgcagctgcagctgccgtcggcgctgacgctgctgccgccgtcgttcacc
tcgctgtgcctgccggctcagaactggtgcgccaagtgcaacgcgtccttccgcatgacc
tcggacctggtctaccacatgcgctcccaccacaagaaggaatacgcgctggagccgctc
gtcaagcgccgccgggaggagaagctcaagtgtcccatctgcaacgagtccttccgcgag
cgccaccacctctcccgccacatgacctcccacaactag
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