Lonchura striata (white-rumped munia): 110470260
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Entry
110470260 CDS
T05897
Symbol
PTCHD4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110470260 (PTCHD4)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Other domain-containing proteins
Patched domain-containing proteins
110470260 (PTCHD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
110470260
NCBI-ProteinID:
XP_021385443
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All DBs
Position
3:complement(110744718..110826859)
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AA seq
904 aa
AA seq
DB search
MCFLRRPGASAGWIWWRMLRQVIHRGLQSFFYKLGLFVSRHPVFFLTVPAVLTIIFGFSL
LNRFQPDTDLESLVAPSHSLAKIERSLASSLFSLDQSKSQLYSDLHTPGRYGRVILLSKP
GGNILHQADVILQIHRAVLEMKVNYKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQA
ALSNKTTARVQVSYPNTKLKDGRSSFIGHQLGGVMEVPNSKDQRVKSARAIQITYYLQTY
GSVTQDLIGEKWESEFCKLMHKMQLDHQDLQLYSLASFSLWKDFHQTSLLARGKILVSLM
LILLTATLSSSMKDCLRSKPFLGLLGVLTICISSVTAAGIFFITDGKYNSTLLGIPFFAM
GHGTKGVFELLSGWRRTRENLPFKDRVADAYSDVMVSYTMTSSLYFIAFGMGASPFTNIE
AVKVFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWF
QTMMNDGHQHTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGC
LQINDGANIINLLASESPSVSYALIQQKYFSNYSPVIGFYIYEPLEYWNGTVQEDLKTLS
QGFNTVSWIEQYYQYLRVGNISATNKSDFISILQSSFLKKPEFQHFKNDIIFSKAGDENN
IIASRLYLVARTSENTQREAVELLEKLRPLSLIQSIKFIVFNPTFVFMDHYGLSVTMPVL
ISGFGILLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTL
NFAIDHCAPLLYTFVLATEHTRTQCIKNSLQEHGTAILQNVSSFLIGLVPLLFVPSNLTF
TLFKCLLLAGSCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDH
VTAV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttctaagacggccaggagcatctgcaggctggatctggtggaggatgctgcgg
caggtgatacacagagggctccagtcgtttttctacaagctgggcttattcgtgagcagg
catccggtgtttttcctcactgtgcccgcagtcctgaccatcatcttcggcttcagcctg
ctcaaccgcttccagcctgacactgacctggagagcctggtagcccccagccacagcctg
gccaagatcgagaggagcttagccagcagccttttctccctcgatcaatccaaaagccag
ctgtattcggacttgcacaccccggggaggtatggcagggtgattctcctctccaaaccc
ggaggcaatattttgcatcaggctgatgtgatcctgcagatccaccgagccgtgctggaa
atgaaggtgaactacaaaggctataattatactttttcccatctgtgtgtgttgagaaat
caggataagaaatgcgtgctggatgatattatttcagttctagaggatctgaggcaggct
gccctctccaataagacaacagccagggtgcaagtgagctatcccaacactaaattaaag
gatggaaggagcagtttcattggccaccagcttggaggggtaatggaagtgccaaacagc
aaggaccagagagtcaaatcagccagagccatccaaatcacttactacctccaaacgtat
ggctctgtcacccaggacctcattggggagaagtgggagagcgaattctgtaaactgatg
cacaagatgcagctggatcaccaggatctgcagctctactcactagcatccttcagcctc
tggaaggacttccaccagaccagtctcttggccaggggcaagattttggtgagcctgatg
ctgattctcctgactgctaccctctcgagctccatgaaggactgcctgcgtagcaaacct
ttcctgggactcctgggagtgctcactatctgtatttccagtgtcactgcggcagggata
tttttcattactgatggaaaatataattctactctgttgggaatccctttcttcgctatg
ggtcacggaaccaagggagtgtttgaacttctttcaggatggcgccggaccagggagaat
ctgccattcaaggaccgagtagcagatgcctactcagatgtcatggtctcctacaccatg
acaagctccttgtatttcatagcctttggcatgggggcaagccccttcaccaacatcgaa
gctgtaaaagtcttctgccagaacatgtgtgtctccatcctgttgaactacttctacatc
ttctctttctttggctcctgcctggtctttgctggccagctggagcagaaccggtaccac
agcatcttctgctgtaaaatcccctcggcagaatacctggaccggaaacctgtgtggttc
cagaccatgatgaacgacggccatcagcacacttcccaccacgagaccaacccgtaccag
caccactttatccagcatttcctccgagagcactacaatgagtggattaccaacatctat
gtcaagccatttgtggtgatactgtatctcatctatgcctctttctcctttatggggtgc
ttacagattaatgatggagccaacatcatcaaccttctcgccagtgagtccccaagcgtc
tcctatgccctcatacagcaaaagtatttcagcaactacagccctgtgataggcttctac
atctacgaacctctggagtactggaatggtactgtgcaagaagacctaaaaacactcagc
caggggttcaacaccgtgtcctggattgaacagtattaccaataccttcgagtgggtaac
atcagtgcaaccaacaaaagtgactttatcagcatcctccagagctcctttttaaaaaag
ccagaattccagcacttcaaaaatgacatcattttctccaaagctggagatgagaacaac
ataattgcttctcgtctgtaccttgtggccaggactagtgaaaacacacagagggaagcg
gtggaactgctggagaagctgaggccactttctcttatacagagcattaagttcattgtg
ttcaaccctacttttgttttcatggaccactatggtttatcagtaactatgcctgtcctg
atttctggttttggcatcctgctggtgttaatactgacctttttcctggttatccaccct
ctgggaaatttctggttaatccttagtgtcacctcaatagagctgggtgtccttggcttg
atgaccttatggaatgtagacatggattgcatttctatactgtgccttatctacactttg
aattttgccatagatcactgtgcacccctgctttatacatttgtattagctactgagcac
acccgaactcagtgtataaagaactccctccaagagcatgggacagccattttgcagaac
gtttcttcctttcttatcgggttggtcccccttctctttgtgccttcaaacttgaccttc
acactgttcaaatgcttgctgcttgccggcagttgcacacttctgcactgttttgttatt
ttgcccgtctttctaacctttttcccaccttccaaaaagcaccacaagaaaaagaaacga
gccaaaaggaaggaacgagaagagatcgaatgcatagagattcaggagaatcctgatcat
gttacagcagtatga
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