Lonchura striata (white-rumped munia): 110470407
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Entry
110470407 CDS
T05897
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110470407 (DSCAML1)
Cell adhesion molecules [BR:
lsr04515
]
Immunoglobulin superfamily
Other
110470407 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
110470407
NCBI-ProteinID:
XP_021385684
UniProt:
A0A218UPJ0
LinkDB
All DBs
Position
24:complement(969710..1063628)
Genome browser
AA seq
1941 aa
AA seq
DB search
MWLVTFLLLYSLPKARAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKAVAVPIPHRASKSRSPWAPWGSCPASAPQSSPKSLGGL
PNPVFLNILGISPRAVMFLLC
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacgcgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacgggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcagagaactcggctggcaaaatcaggagccccaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccggctctccgtctcagacccg
gcggagtccatccccacgatgttagacagcttccagtcccgggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcaccgggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacgggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactcc
ggggcctaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccacccaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tctgatggcaccaccgtcagccacatgaacgtgaccagcccgcagatcaaggacggcggc
gtgtaccgatgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgcgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtctttgagaacggcaccctgaagctg
atggatgtccagaaaggcatggatgaaggagagtatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctccgctgatccagccc
ttcgagttcccaccagcctccatcgggcagctcctctacatcccctgcgtggtctcctct
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagtgtctcgctc
aagcacaacgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggaaaagccggggtgttgaactgctctgttgatgggtacccccctcccaaagtc
atgtggaagcacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccggccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacggcgcggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaaccagccgaccgcggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcttgatccag
ctcactgtccaagagccccctgacccgcccgagctggagatccgcgaggtgaaagcccgg
agcatgaatttgcgatggacacagcggttcgacggcaacagcatcatcaccggcttcgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctccgtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctcccatggatgtcaccttgcagccgatcacgtcccag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagattggctaccgggagaacagcccgggcagcaacgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtctacacgctggacaacctcaagaagttcgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggatgttcccagccagccccccgagaacgtgcgagccatctcc
atcacctcggacgtggccgtgatctcctggtcggagcccccgcgcagcaccctcaacggg
gtgctcaaggggtaccgcgtcatcttctggtccctctacatggacggagagtggggcgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcgggcgacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccagctgggatcaaggctgtgccg
tcctctgccagcagcgtggtggtgtcctggctgccgccggccaagcccaacggcatcatt
cggaagtacaccatcttctgctccagccccggctcggggcagccggctcccagcgagtac
gagaccagccctgaccaactcttctaccgcatcgcccacctgaaccggggacagcagtac
ctgctctgggtggccgccgtcacctccgccggccgcggcaacatcagcgagaaggtcacc
atcgagcccgcgggcaaagcccccgccaagatcatctccttcggaggcaccgtcaccacg
ccatggatgaaggacgtgaggctgccgtgcaactccgtcggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacagtggacgggcaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaagccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccagaccagccccgcctgaccgtctccaagacctcagcatcgtccatcacgctg
gcctggatccctggggacaatgggggcagctccatccgaggcttcgtgctccagtactcg
gtggacaacagcgaggagtggaaggacgtgttcatcagctcctcggagcgctccttcaag
ctggagagcctcaagtgcggcacctggtacaaggtgaagctggcggccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcacggccatcgtgctggagtaccggcccaagggc
aactgggtgtggcagagcctccgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccgcgcagttcgccacgctggactacgacggcagcaccatccccccgatcaagtct
gcccaaggggagggtgatgacgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcgaagagtttggcagaaatgctgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccacagggcccccgcctgcacatcgacatcccgcgg
gtgcagctgctcatcgaggacaaggagggcatcaagcagctgggggatgacaaagccacc
atcccggtgaccgacacagagttcagccaggcagtgaacccccagagcttctgcacgggc
gtctccctgcaccacccagccctgatccagaacacggggcccctcatcgacatgtccgac
atccgcccaggcaccaaccccgtgtcgaggaagagcgtgaagtctgcgcacagcacccgc
aaccggtactccagccagtggacactcaccaagtgccaggcgtccaccccggcgcggacc
ctcacctcggactggaggaccgtgggctcccagcacggcatcacggtcaccgagagtgac
agctacagcgccagcctctcgcaggacacagacaaggggcggaacagcatggtgtccacg
gagagcgcctcgtccacctacgaggagctggcgcgcgcctacgagcacgccaagctggag
gagcagctgcagcacgccaagttcgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacggacaacgccgacagcatgacctccatgagcaccccg
tccgagcccggcatctgccgcttcaccgcctcgccgcccaagccccaggacagcgagcgg
ggcaaggccgtggccgtgcccatcccacaccgcgccagcaagagtaggtccccatgggcc
ccgtgggggtcctgcccggcctcagcgccccagagctccccaaaatccttaggaggcctt
cccaatcctgtattcctcaacattcttggtatttctccccgtgctgtaatgttcttgctc
tgttga
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