Lonchura striata (white-rumped munia): 110470418
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Entry
110470418 CDS
T05897
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110470418 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110470418 (CADM1)
Cell adhesion molecules [BR:
lsr04515
]
Immunoglobulin superfamily
Nectin family
110470418 (CADM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
110470418
NCBI-ProteinID:
XP_021385705
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Position
24:complement(449072..581980)
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AA seq
488 aa
AA seq
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MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGDGQNLVTEDVTVVEGDVATISCR
VKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQ
LYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKE
LTGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVR
VSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKT
DNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVH
GFTQLPNSAEELDYGDLSGTSVLPTASAEALPTVQLSNASLASHPDSRAGEEGAIRSVDH
AVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNNS
EEKKEYFI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcccagcggccccgcgggcagcggcggcggcgccccggggctc
ctcccgctgctgctgctgctcctctccgccgccgccatcatcccccgaggtgatggtcag
aacttggtgacggaggacgtgaccgtggtggagggggacgtggccaccatcagctgccgc
gtcaagaacagcgatgactccgtgatccagctcctgaaccccaacaggcagaccatctat
ttcagagatttcaggccactgaaggacagcaggttccagctggtgaacttctccaacagc
gagctccgagtgtccctgaccaacgtgtccatctctgatgaagggaggtacttctgccag
ctctacaccgacccgccccaggagatctacaccacgatcacggtgctagtcccaccgcgc
aatttggtaattgatatcgagaaagaaaccgccgtggagggagaggagatcgagctgaac
tgcaccgccatggccagcagaccagccaccaccatcagatggttcaaaggcaacaaggag
ctaacgggcaagtcggaggtggagcggtggtccgacatgtacaccgtgaccagccagctc
ctgctgaaggtggggcgggaggacgacggcgtccctgtcatctgcctggtggaccaccct
gcggtcaaagacctgcagacacagcgctacctggaagtcatgtataagcctcaagtgcgg
gtttctcagaattaccccttgcaaggcctgacgagagaaggggagccgctggagctgacg
tgcacggcctttggaaagccacagcctacggacatgaggtggttaagagtagatgatgag
atgcctcaacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaaca
gataatggtacataccgctgtgaggcttccaacgcggtggggaaatcacatgcggattac
atgctgtttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccact
accaccaccatccctaccaccatcacagacacaacggcgacgacagaaccagcagttcac
ggctttactcagttgcccaattcggccgaggagctggactatggggatctctcaggtaca
tctgtcctgcccacagcttcagccgaggctctgccgactgtgcaattaagtaatgcatcc
cttgcctcccacccagattcccgcgcaggtgaggaaggggccatacggagcgtggaccat
gccgtggttggtggcgtcgtggccgtcgtcgtctttgcgatgctttgcctgctcatcatt
ttagggcgatattttgccagacataaaggtacatacttcactcacgaagccaaaggagca
gatgatgcggccgacgcagacacagccatcatcaacgcagaggggggacaaaacaactcc
gaggaaaagaaagagtacttcatctag
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