Lonchura striata (white-rumped munia): 110470436
Help
Entry
110470436 CDS
T05897
Name
(RefSeq) vitellogenin-1
Organism
lsr
Lonchura striata (white-rumped munia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vitellogenin_N
Vit_open_b-sht
Vit_b-sht_shell
VWD
Motif
Other DBs
NCBI-GeneID:
110470436
NCBI-ProteinID:
XP_021385755
LinkDB
All DBs
Position
8:18890773..18933744
Genome browser
AA seq
1888 aa
AA seq
DB search
MRGLILALVLTLVGSQHLNYQPDFSENKVYTFDYETTLLGGLPEKGLARSGIRIKSKVEI
SGIGPKLCLIRVHSIEAAEYNGVWPTSSFSRSLKLTQVLTGQLSNPIKFEYSNGHVGNIM
APDSVSEDGLNIYRGILNVLELSIKKMQNSYSLQEAGIGGICNTTYAIQENKRANLVYVT
KSKDLDSCEEKVQFVTGSAYTHPCKTCQQRNKNSRATATYNYKIKYTRSEAVITQADVEE
IHQFALFNEITGGNTLVEARQKLALTDVQKQRAEVPPKEYQSRGSLQYQFGSELLQLPVH
LFKIKDVESQIEESLQELVEATSDQLPSDAPAKALKLLHLFRAANEEDYEAVWKRFSSRP
AYRRHILDIIPAVASHRALRFLRHKMERQELSSWEVTQTLLVALHSSTPTQAVMEEATLI
VKKHCPRSSSVLGKVCHLSFASLCHKHCSSADSCSECLQLLHGFAGEALSKSSTEEISLA
LKALGNVGHPASIKHIKKFLPGYAAGALDLPLRVHVTAVMALKNIGLKDPKMVQAITLEI
FLNQKIHPRIRMLAAAVLLETKPGLPIVMTLADAVLKEPSMQVASFIYSHLRALGRSTAP
DLQVIASACRMAVRALTPKFDRSGYQFSKVFRFSIFKEFLMSGLAAKYLVLNNAGSLIPA
MAMSQLRTHFLGRVADPLEVGITAEGLQEIFAKGYAPDSNWETDYDFKKILKTLSDWKAF
SSDKPFASGYLKMFGQELFFGGLDKNAIQNALQAWYGSDEKIPSLRRIISSLQSGVGRQW
TKTLLSSEIRRIVPTCTGFPTETSFYYSSITKVAGNVQAQITPSPKSDFRLTDLLNANIR
LRSKMSLSMAKEMTFVMGINTHTVQAGLEARTKINAHVPVNVVASIQMREKNIKIEIPPC
KDETNIITIRSKTFAVTRNIGDLASGKITPVLSPEAVPDIMKTSFNSDSASGETDNIGGR
QSAEDVSSGNPFSSGRSSSQKEPFVQSVCFNASTFGVQVCIEKKSMHAAFIKNLPLYYLV
GEHALRISFKPVYTEAPIEKIQVTIQAGDQAPTKMVRLVTFEDPEAQASSRKEAIKKVKK
ILADTDDQGTRKYRSSSSSASSASGSAESTTSSPSSSDSDDRASQGGTKINLKTGQPKAK
GKKFYPFGDSGSSSSSGSSSKSSSSSSSGSSSDSSSSGSSSSKSSSSSSKSSSSSSKSSS
SSSKSSSSSSKSSSSSSKSSSSSSKSSSSSSSSSSSKASGIKQKAKKLSKTASFPLASAA
EGERSVREQKAETQSSSSSSSSESTGASHWRSKSDQGAETNHAKSQVYSGSSHISTEWEY
RLPKVYSLRFKSAHIHWHPDHKGSSSSSSSSSELGSSHRNSSSSSDSSSNSHHHHHHHHG
ENSAHNSRRSKRVSIHHHSHGSSLTREHNFLGDVIPPGITIVAQAVRSDNRNQGYQATAY
VRSDAAKVDVQLVVVQLAETNWKACADAVILPLKAQARLRWGKECQDYRIEAGATTGQLA
RKPAAQLKVQWGKLPSWIKKTSTAFMQYIPGAALVLGFSEAHQRNPSHEFIVRAAATSPR
TIDTVIKAPEVTLYCQGFRLPFTLPLGPSPAYETRDITAWNLFPEIASQIAQEDQSTCEI
RETDFKTFDRVSYSCSFNKSCNLVVVQDCTEHPKFIISTRKVDPQSFSREVHINTTSANI
TICPASNSSLLVACNEEQVLSHSGGSKYEKDNVKIYKNGKTVTVEVPELGLKEVTFDGVN
LKVTVASWMRGKTCGVCGNNDREKENELLMPNHRLARSCSAFVHSWVLLEETCSGGCKLQ
RSYVKLNRNPTIDGEESTCYSVDPVLKCMKDCTPIEKAPVKVGFHCFPKETAVSLLEWQK
SSDKKSAFEDVVESVDADIDCTCTGSCS
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcttgatattagccctggttttaaccctagtggggagccagcatcttaattac
caacctgatttcagtgaaaacaaggtttatacatttgattatgaaaccacacttctcggt
ggacttccagagaaaggacttgcgagatctggaataagaataaaaagtaaagtggaaatt
agtggtattgggccaaaactttgtcttattagggttcactcgatcgaagccgcggagtac
aatggtgtctggcccacaagctcgttctctcggtcgctgaagctgacccaggtcctcacc
gggcagctcagcaaccccatcaagtttgagtacagcaatggccacgttgggaacatcatg
gctcctgattctgtctcggaggatggtctgaacatctacagagggattctgaacgtgctg
gagctgagcataaagaagatgcagaattcatacagtctacaggaggctgggattggaggt
atttgtaacacaacatatgcaattcaagaaaacaagagagcaaacctagtctatgtgacc
aagtccaaggacctggacagctgtgaagagaaagttcaatttgtcacaggttcagcatac
actcatccatgtaagacctgccagcagaggaacaagaattcccgtgcaactgctacttac
aattacaaaattaaatatacacgtagtgaagctgtaattacacaagctgatgtcgaggaa
atccaccagtttgcactcttcaatgagataacaggaggaaatactcttgtagaagcaagg
cagaaacttgctttgactgatgtgcagaagcagagggcagaggtcccaccaaaagagtac
cagagtcgtggatctcttcagtatcagtttggcagtgaattgcttcagcttcctgttcac
ttattcaaaataaaagatgtggaaagccagatagaggaaagcctgcaagaattagtagag
gccacctctgaccagcttcccagtgatgcaccagccaaagctctcaagcttctgcacctc
ttccgtgcagcaaacgaggaggattacgaagcagtgtggaagcgattctccagtcggcca
gcttacaggcgccacattttggatataattcctgcagtggccagtcaccgagcactcagg
ttcctgcggcacaaaatggaaaggcaggagctcagcagctgggaagtgactcagacactg
ctcgtggctctgcactccagcactccaacccaggctgtgatggaggaagcaacgctcatt
gtaaagaagcattgcccccgctcaagctccgtgcttgggaaggtttgccacctcagcttc
gcgtccctgtgccacaagcactgctcctcagcagactcctgctccgaatgtctccagctt
cttcatggctttgcaggggaggcattgagcaagtctagcacagaagaaatttccctggct
ttgaaagcccttgggaatgtaggacatccagccagcatcaagcacatcaagaagtttttg
ccaggatatgcagctggtgccttggatttgccactcagggtccatgtgactgctgtcatg
gccctgaaaaacattggcctaaaagaccccaaaatggtccaggctattacccttgagatt
ttcctgaatcaaaaaattcatcctcgaatccgaatgttggctgcagcagttttacttgaa
accaagccgggccttccaattgtgatgacattagctgatgctgtgctgaaggaacctagc
atgcaagtggcaagtttcatctactctcacttgagggccctgggtagaagcacagctcca
gatcttcaagtgatagcttctgcatgcagaatggctgtcagagcactaactcccaagttt
gacagatctggatatcagttcagcaaagttttccgcttcagcatctttaaagagttcctt
atgagcgggctggcagctaaatatttggtactgaataatgcgggtagcctaattccagct
atggcaatgtcccagctacggacgcatttccttggaagagtggctgatcccttggaggta
ggaataacagctgaaggactgcaggagatatttgccaaaggttatgctcctgacagcaac
tgggagactgactatgacttcaagaaaatcctgaaaacgctctctgactggaaggcattc
tccagtgacaaaccttttgcatcaggctacttgaagatgtttggccaagagctgtttttt
ggtggacttgataaaaacgccatccaaaatgcactgcaggcatggtatggatctgatgaa
aaaatcccttcactaaggagaataatcagtagccttcaaagtggtgtagggaggcagtgg
accaaaactctcctgtcctctgagatccgccgcattgtgcccacctgcactggcttccca
acagagaccagcttctattactcttctatcacaaaagtggcaggaaatgttcaagcacag
attacaccttctccaaagtctgatttcagattgactgatttactaaatgccaacattagg
ctgagatccaaaatgagtctaagcatggccaaggagatgacctttgtaatgggaattaac
acacacacagtccaggcaggactggaagcacgcaccaaaattaatgctcatgtacctgtg
aatgttgttgccagtatccagatgagggaaaaaaatatcaaaattgaaattccgccgtgt
aaagatgagactaacataattaccataaggtctaagacatttgctgttacacgaaatatt
ggggatttggcttctggtaagattactccagttctttcacctgaagcagtgcctgacata
atgaagacgtccttcaattcagattctgcgtcaggcgagactgataacattgggggtaga
cagtctgcagaggatgtttcatctggaaatcccttttcttctggacgctcttcttcccaa
aaagagccatttgttcagtccgtgtgcttcaatgcgagtacgtttggagttcaagtgtgc
attgagaagaaaagcatgcacgcagcatttatcaaaaacctgcctctttattacctagtt
ggagagcatgccctgagaatcagcttcaagccagtttacactgaggcacctattgaaaaa
atacaagtcacaattcaagcaggagaccaagctcctacaaaaatggtacgtctagtaaca
tttgaagatccagaggcacaagcatcttccagaaaagaagcaattaaaaaagtgaagaaa
atccttgctgacactgatgaccaggggacaagaaaatacaggagctcgtcatccagtgcc
agcagcgccagtggaagtgccgagagtacaacgagcagcccctccagcagcgactctgat
gacagagcatcacaggggggcaccaagattaatctgaaaacagggcagcccaaagccaaa
gggaagaagttctacccatttggggacagtggcagtagcagcagtagtggtagcagcagc
aaaagcagtagtagtagcagcagtggtagtagtagcgatagcagtagcagtggtagtagc
agcagtaagagcagcagtagtagtagtaagagcagcagtagtagcagcaagagcagcagt
agtagcagcaagagtagcagtagtagcagcaagagcagcagtagtagcagcaagagcagc
agtagtagcagcaagagcagcagtagtagtagtagcagcagcagtagcaaagcatctggt
ataaagcagaaggctaagaagctgtccaagaccgcatcatttccacttgccagtgctgct
gaaggagagagaagtgtccgtgagcagaaggctgaaacacagagcagcagcagcagcagc
agcagtgaaagcactggtgcctcccattggcgcagcaaatctgaccaaggagctgagaca
aaccacgccaagtcccaagtttacagtggcagtagtcacatttccacagaatgggaatat
cgccttccaaaagtatacagcctccgcttcaagtctgctcacatccattggcatccagat
cataaaggatcaagcagctcatcatcatcttcctctgagctgggaagcagccacagaaac
agcagcagtagcagcgacagcagcagcaacagccaccaccaccaccaccaccaccatgga
gaaaattctgcccacaactcaaggaggagcaaaagagtcagcatccaccaccacagccat
ggctccagcctgacacgggagcacaacttcctgggagacgtaattccacctggcattacg
attgtggcacaggcagtacggagtgacaacagaaatcaaggttatcaagctacagcatat
gttcgttctgatgctgccaaagttgatgtgcaactagttgtggttcagctggctgaaacc
aattggaaagcatgtgctgatgctgtgatactgcctctgaaagcacaggccagactgaga
tggggaaaggagtgccaggattacaggatagaagcaggagctaccacaggacaactggca
aggaagccagctgcacagctgaaggtgcaatggggaaagcttccatcctggataaaaaag
acaagcacagcattcatgcaatacattcctggtgcagctctcgtgttgggcttctcagaa
gcacatcagagaaatccatctcatgaattcatagtaagagcagctgcaacttctccacga
acaattgatacagtaattaaagctcctgaggtaacactttattgtcagggattccgattg
ccattcactctgcccttaggcccatctccagcttacgagactcgagatatcactgcctgg
aatttatttcctgaaatagcttcacaaatagcacaagaagatcaatccacgtgtgaaatc
agagagacagatttcaaaacatttgatcgtgtgagctattcatgttctttcaataaaagc
tgcaacctggtggtggttcaagactgtactgaacacccaaaattcatcattagtacaaga
aaagttgatcctcaatctttctcaagagaggttcacataaatacaacatcagcgaacatc
acaatctgtcctgcctcaaattcatctctccttgtagcatgcaatgaagaacaagttcta
tcacacagtggaggttccaaatatgaaaaagacaatgtcaaaatttataaaaatggaaaa
accgttactgtggaagttccagaacttgggctgaaggaagtgacttttgatggtgtaaat
cttaaggttacagttgcttcatggatgagaggaaagacctgcggagtttgtggcaataat
gacagagaaaaagaaaatgagctcctcatgccaaaccataggctggcgcgcagctgttct
gcatttgttcattcatgggtattgctagaagaaacctgctctggtgggtgcaagctgcag
cgcagttatgtgaagctgaatcgaaaccctactattgatggtgaggaatctacgtgctac
tctgttgacccagtactgaaatgtatgaaagactgtactccaatcgaaaaagctccagta
aaggttggcttccactgcttcccaaaagaaactgctgtaagcctgttggaatggcagaaa
agcagcgataagaaatctgcatttgaggatgttgtggagtctgtggatgctgacattgat
tgtacctgcactggcagctgtagttaa
DBGET
integrated database retrieval system