KEGG   Lonchura striata (white-rumped munia): 110470579
Entry
110470579         CDS       T05897                                 
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lsr03000]
    110470579 (SOX21)
Transcription factors [BR:lsr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110470579 (SOX21)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1 TGF_beta_GS
Other DBs
NCBI-GeneID: 110470579
NCBI-ProteinID: XP_021385996
LinkDB
Position
1:41385478..41388182
AA seq 281 aa
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq 846 nt   +upstreamnt  +downstreamnt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacgaaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgctgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaagcggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggccgcgg
cggaagcccaagacgctgctcaagaaggacaagtttgccttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggccggcgggctggtgcccgagtcgctcctggccaaccccgagaaggcggcagccgcc
gccgccgccgccgccgctcgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctattccctgctggacctgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccggattgccctatgcctcctcgctgggc
tatcccggcgccggcggggcgggcgccttccatggggccgccgctgctgccgccgccgcc
gcggccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcc
ctatga

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