Lonchura striata (white-rumped munia): 110470590
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Entry
110470590 CDS
T05897
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110470590 (CHD2)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110470590 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
110470590
NCBI-ProteinID:
XP_021386005
UniProt:
A0A218UPG4
LinkDB
All DBs
Position
10:14860842..14932058
Genome browser
AA seq
1829 aa
AA seq
DB search
MMRNKDKSQGEEGSVHSNASSHSASEEASGSDSASQSESEQGSESNSSSESSESQSESES
ESTGSKSQQTPPETKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKDEA
SSESENESPKRRRQKQLKRKIKWKREVSAGEEDEDGGEQGTSGESEPEPKKIKARRPVQR
RTVAKTGVKKPHKIQRGKRKKPDSSEDDDDDEDDETPKRQTRRRAAKNVSYKEDDDFETD
SDDLIEMTGEGADEQQDNSETIEKVLDIRLGKKGAIGASTTVYVTEANGNPSADFDPEKD
EGEVQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEEEIKQWLGKVSPEDVE
YFNCQQELASELNKQYQIVERVIAVKTSKSATGHSDFPANSRKSSSNDPEYLCKWMGLPY
AECSWEDEALISKKFQHCIDSFNSRNNSKTIPTRDCKVLKQRPRFVALKKQPSYIGGENL
ELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVVVPL
STLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYEWIHSQSKRLKFNALITTYEILLKD
KTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHF
IMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMS
ALQKQYYKWILTRNYKALSKGTRGSTSGFLNIVMELKKCCNHCYLIKPPEENERENGLET
LQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIK
GEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAH
RIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLDNNSGRSNSNP
FNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLSQFK
VANFATMEEEETELDERSQKDWDDIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKKAQ
TNDSESDAETKRRLQRSSGSESETDDTDDEKRPKRRGRPRSVRKDTVEGFTDAEIRRFIK
AYKKFGLPLERLECIARDAELVDKSVADLKRLGELIHNSCVSAMQEYEEQLKENPAEGKG
PGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPSDPEERKKYRLTCRVKAAHFDVDW
GVEEDSRLLVGIYEHGYGNWELIKTDPELKLSDKILPVETDKKPQGKQLQTRVDYLLKLL
KKDLDKKENMKDGEEGKLKKRKPRVKKENKAPKVKDEHGNELSSPRHSDNQSEEGEVKED
GLDKSPVKKKQKKKENKENKEKQTSSKKEKESDKEKKKTKDKKEKPKGGEAKSGSKGKRS
QGPVHITAGSEPIPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGLTVQEQLEH
TRNCLLKIGDRISECLKAYNDQDHIKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKEDMSNMKKQFRPEPSGSSRDSVMSQSHVPHNPHSQKIHMPPSHTQQQMHGHP
RDNYGHPNKRHFSNTDRGDWQRDRKFNYGGNSNQMWGGERHHQYEQHWYKDHHYGDRRSR
GDPHRSSGNYRPNNLSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQNYHQQ
DFRRMSDHRPPMGYHGQGPSDHYRSFHTDKLGDYKQPLPPAHPAVSDPRSPPSQKSPHDS
KSPLDHRSPLDRSLEQKNNPDYNWNIRKA
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaataaggacaaaagccaaggagaggagggttcagtccacagcaatgcatcg
agtcactcggcatccgaagaagcctctggctctgactctgcaagccagtctgaaagtgag
cagggcagcgagtcaaacagcagctccgagtcctctgagagtcagtctgaatccgaaagt
gaatcaacgggttccaaatcccagcagacccctcctgaaaccaaagaaaagccagcctct
aagaaggaaaggatagcagatgttaaaaagatgtgggaagaatatcctgatgtttatggg
gttaggaggtcaaaccgaagcagacaagaaccgtcacgatttaatataaaagatgaggca
agtagcgaatctgaaaatgagagcccaaaaagaagacgccagaagcagttgaaaagaaaa
attaaatggaaaagagaggtctctgctggagaagaggatgaagatggaggggagcaaggc
accagtggagagagtgagcctgaaccgaagaaaattaaagcaagaagacctgtccagagg
agaacagtggccaaaactggtgttaaaaagccccacaaaatccagcgtgggaagaggaag
aaaccagactcatctgaagatgacgatgatgacgaagacgatgagacccccaagagacaa
acccggcgaagagcagccaaaaatgtcagctacaaagaggatgacgattttgagacggat
tctgatgacctgatagagatgactggggaaggagctgatgaacaacaagacaacagtgaa
actattgagaaagtcttggatatcaggcttggaaaaaagggagccattggagcttccacc
acagtgtacgtgaccgaggccaacggcaaccccagcgccgacttcgaccctgagaaggac
gagggggaggttcagtacctgatcaaatggaagggctggtcatacatccacagcacgtgg
gagagcgaggagtccttgcagcagcagaaagtgaagggcctgaaaaagctagaaaacttc
aagaaaaaagaggaggagatcaagcaatggctgggcaaagtatcacctgaagatgtagaa
tatttcaactgccaacaagagctggcttcagagctaaacaagcagtatcaaatagtggag
agggtaatagctgtgaagaccagcaagtctgccacaggacattcagatttcccagcaaac
agtcgcaaatcatcctcgaatgaccccgaatacctgtgcaagtggatggggctgccctat
gctgagtgcagctgggaagatgaggctctgatcagcaagaaatttcagcactgcattgac
agcttcaacagcaggaacaactccaagacaattcccacccgtgactgcaaggtgttgaag
cagaggccgaggtttgttgccttgaagaagcagccctcatacatcggtggggagaacctg
gagctgagggattaccagctggagggcctcaactggctcgctcactcctggtgcaagaac
aacagcgtgatcctggctgatgaaatgggtctgggcaagaccattcagacaatatcattc
ctgtcatacctgttccatcagcaccagctgtatggccctttcctggtggtcgtgcccctg
tccaccctcacctcctggcagagggagtttgaagtgtgggcacccgagataaacgtggtg
gtttacattggagacctcatgagcaggaacatgatacgtgaatatgagtggatccattct
cagtctaaaagattgaaattcaatgcacttatcacaacttacgagatcctcctgaaggat
aagactgttttgggaagcattaactgggcctttcttggcgtggacgaagcccatcggttg
aagaatgatgactccttgctgtacaaaaccttgattgatttcaagtccaaccacaggctg
ctgatcactggcaccccacttcaaaactcactcaaggagctctggtccctgctgcacttc
atcatgccagagaagtttgagttctgggaggattttgaggaggatcacgggaaaggcaga
gagaatggctaccagagccttcacaaagtcctggagccgttcctgctgcgcagagtgaag
aaggacgtggagaaatctttgccagccaaagtggagcagatcctccgggtggaaatgtct
gctctgcagaagcagtactacaagtggattttgacaagaaactacaaagctctttcaaag
ggaacaaggggaagcacatctggtttcctgaatattgtaatggaattgaaaaagtgctgc
aaccattgctaccttatcaaacctcccgaggaaaatgagagagagaatggccttgagacc
ctgcagtctttgatcagaagcagtggaaagctgattctcttggacaaactgctgaccagg
ctgcgggagagaggcaacagagtgttgatcttctcccagatggtgaggatgctggacatc
ttggcagagtacctgactatcaaacactacccttttcagcgcttggacggctcgatcaag
ggggagatccgaaagcaggcgctggatcacttcaacgccgacggctccgaggacttttgt
ttcttgttgtcaacaagagctggagggttgggaattaatttggcctctgctgatactgtt
gttatctttgactcggactggaacccccaaaatgatcttcaggctcaagcccgagctcat
cggattggacaaaagaagcaggtgaacatttaccgcctggtcacaaaggggacagtggag
gaggagatcattgagagagccaagaagaaaatggtgctggatcatttggttatccagcgt
atggacaccactggccggactgtcctggacaacaactctgggagatccaactcaaatccc
ttcaacaaagaggagctgacagctattttgaagtttggagctgaagatcttttcaaggag
cttgaaggggaagaatcagagcctcaggagatggacatcgatgagattctgcgtttggct
gaaacacgggagaatgaggtgtccaccagtgccaccgacgagctgctctcccagttcaag
gttgccaactttgcaaccatggaggaggaagagacagagctggatgagcggtcccagaag
gactgggatgatatcattccagaagagcagaggaaaaaggtggaggaggaagaaaggcag
aaagaattggaggaaatctacatgctgcctcgaatccggagctcaacaaaaaaggctcag
acaaatgacagtgaatccgatgcagagaccaagagaaggctgcagagatcatctgggtca
gaaagcgagactgacgataccgacgacgagaagagaccgaagcgcaggggacgcccgcgg
agcgttagaaaagacactgtggagggatttactgatgctgaaatcaggaggtttatcaag
gcttacaagaagtttggattgcctcttgaacggctggagtgcattgcccgggatgctgag
ctggtggataagtctgtggctgacctgaagcgcttaggggagctcatccacaacagctgt
gtgtcagcaatgcaggaatacgaggagcagctgaaagaaaatccagcagaagggaaggga
cctggaaagagacgaggtcctaccatcaagatttctggtgtccaagtcaatgtgaaatcc
atcatccagcacgaagaggagtttgaaatgctgcacaaatccattccctcggacccagag
gaaaggaagaagtaccgcctgacgtgccgtgtcaaagctgctcattttgatgtagactgg
ggagtggaggaggattctcgcttgttagtgggaatttacgagcatggttatggaaactgg
gagctcattaaaacagatccggagttgaagttatctgacaagatactaccggttgagaca
gataaaaaacctcagggaaaacagctccagacccgagttgattatctactgaaactgctg
aaaaaagatctggacaagaaagaaaacatgaaagatggggaagagggcaagctgaagaag
aggaaaccacgagtgaagaaagagaacaaggctcccaaagtcaaagatgaacatgggaat
gaactctcctctcctcggcactcagacaaccagtcagaagaaggggaagtcaaggaggat
ggcttggacaagagcccagtgaaaaagaaacagaagaagaaagagaacaaagagaacaag
gaaaaacagacatcttctaagaaagaaaaggaaagcgataaagagaaaaagaagacaaaa
gacaagaaagagaagcctaaaggtggcgaggccaaatctggaagtaaagggaagagatca
caaggtcctgtccacatcactgcagggagcgagccaatccccattggagaagatgaggat
gatgatctggaccaagaaacattcagcatatgcaaggaaaggatgagaccagtaaaaaaa
gcactgaagcaacttgataagcctgacaagggactgacagttcaagaacagctggagcac
acacgcaactgcctgctaaaaattggtgatcgcatctctgagtgccttaaagcctacaat
gaccaggatcacatcaagctatggagaaggaacctatggatatttgtgtcaaaattcaca
gaatttgatgccagaaaactacacaaactctacaagatggctcataagaaaagatcacag
gaagaggaggagcagaagaagaaggaggacatgtccaacatgaagaagcagttccgcccg
gagccttcgggctccagccgcgattccgtgatgtcccagtcccacgtgccccacaatccc
cattcccagaagatccacatgcccccttcccacacccagcagcagatgcacgggcacccc
cgggacaactacggccatccaaacaagagacatttcagcaacacagaccgaggagactgg
cagagggatcgaaagttcaactacggcggcaacagcaaccagatgtggggcggggagcgg
caccaccagtacgagcagcactggtacaaggaccaccactacggggaccggcggtcgcgg
ggggatccccaccgcagctccggcaactacagaccaaacaacctgtcccgcaagcggccc
tacgagcagtacaacagcgaccgcgaccacagaggccaccgcgactactacgacaggcac
caccacgattccaaacgccgacggtccgacgacttcaggcctcagaactaccaccagcag
gatttccggcggatgtctgaccaccggccgcccatgggataccatggccagggaccttcg
gaccactaccggtccttccacacagacaaactgggggattacaaacagcccctccctcca
gcccaccctgccgtgtcggaccctcgctcgcccccctctcagaaatccccccacgattcc
aagtcacctcttgatcacaggtcacctctggataggtcattggaacagaaaaacaatcca
gattataactggaacattcggaaagcgtga
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integrated database retrieval system
