Lonchura striata (white-rumped munia): 110470671
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Entry
110470671 CDS
T05897
Symbol
WDR6
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (34-2'-O)-methyltransferase regulator WDR6
KO
K24737
WD repeat-containing protein 6
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110470671 (WDR6)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
110470671 (WDR6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_2nd
ASA1
Motif
Other DBs
NCBI-GeneID:
110470671
NCBI-ProteinID:
XP_031361843
LinkDB
All DBs
Position
12:complement(11858731..>11863555)
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AA seq
1126 aa
AA seq
DB search
GGGAAARGTRPMSAXGGSGGAGVAKMESVALVAPVTALEFVGDALLAGTGPEVVAFRLSG
GGPAAAAGRRSVLREASVQGLRAEPGPGPAARVAVFGGRWLAVLTVRRGGAGGGPLLAAC
GGGAARELRARVWEARWAAGRRLALALGGGTVALYEWWGGGRWLRQASCGGAGALRCAAL
AGVSWGRLALAAGTATGDVVVWRAAAAKAPQRQLRGHQGAVLALCYAASRGLLASASEDR
SVRLWAVGDLGGGDGAGACLLVCYGHGGRVAAVVLRGPLPVSAGEDGACLEWGGGGGVRR
ARRGHRGALRALALRPAGGRMATGGDDGGVRLWQPRREAAEAVPAVAALGSPERPRAVLL
VGPRRVLVLGEAGGLATFEVAQGRWTPVLHPAASGPRALLAATPLHGWDETLCAVAGGDG
RLLLFALSRPGAAAKLTLFEGAVHGLSWAPRPGLSPNTAAALLASGPGGEMLWLDVTHRP
GQAPWVQLMGRYLLPPCKQRWHTCATFLPQKGLLVCGDRRGSLLLFSCSSSLERAAESTD
IVNGAIDPVVEDSSSELEPSCLLHKEALPLESPLSVLFGLHGKTGVTSVTIHRGYIYSTG
RDGVYHQLRLRDQQLEVLQKHRPCKGLQWIEELQFTSDGDLLVLGFHADNFVVWSSRTGE
NIHCIPCGGGHRSWSYCSSPLAEVFAFIKSGDVMLHHREAEPCEQQVLLASLHGREITCV
RRLGAVEVPGRATLNVFVTGSEDTTICVLVLSENSRAAVPLARLSDHISSVRTLAFAMGP
GDESFGDEGLSALLFSAGGRAQIECYRLLCTGDTATESAVACQVIHVASHRLDKHWEHKK
NRHKLVKMDPETRYMSLSVVPGTSTKQLPTPWKFLAAACSDASVRIFGLLEAARKLVLVA
ESFHHQRCVLKVEAFLHTWAGGERRHLLCSAATDGSIAFWDITSPIMDAADALHQAEGEM
QPLGLGAPLVTIMAHSCGVNSLHIRETPEGQYLVASGSDDGSIHVCLLEVSLDRDEAMAG
TCLQVLERVSRPCAHAAHVTGIRVLRPDLLLSASVDQRLTLWNRSPSELVPLSTTFFHVP
DLAELDCWEVVDAGGELRYYCVLSGQGLEMLCGTASSKPPPQEAPQ
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
gggggcggggcggcggcacgtgggactcggccaatgagcgccnnggggggcagcggcggg
gccggcgtggctaagatggagtcggtagctctggtggcgccggtgacagcgctggagttc
gtgggggacgcgctgctggcgggtacaggcccggaggtggtggcgttccggctgagcggc
ggcgggccggcggcggcggcgggccggcggagcgtgctgcgtgaggccagcgtgcagggg
ctgcgggccgagccggggcccgggccggcggcgcgagtagcggtgttcggtgggcgctgg
ctggcggtgctgacggtgcggcgcggcggagcgggcggcgggccgctgctggcggcgtgc
ggcggcggggccgcgcgcgagctgcgggcgcgggtgtgggaggcgcgctgggcggcgggc
cggcggctggcgctggcgctgggcggcgggaccgtggcgctctacgagtggtggggcggc
gggcgctggctgcggcaggcgagctgtggcggggccggggcgctgcgctgcgccgcgctg
gcgggggtcagctgggggcggctggcgctggcggccggcacggcgacgggggacgtggtg
gtgtggcgggcggcggcggcaaaggccccgcagcgtcagctgcgcgggcaccagggcgcg
gtgctggcgctctgctacgcggcgtcgcggggtctgctcgcctccgcctccgaagaccgc
agcgtgcggctctgggccgtgggcgacttgggcggcggggacggggccggcgcctgcctg
ctggtgtgctacgggcacggggggcgagtggccgccgtggtgctgcgggggccgctcccg
gtcagcgccggggaggacggcgcctgcctggagtggggcggcggcggcggcgtgcggcgg
gcgcggcgcgggcaccgcggggccctgcgcgccctggccctgcgccccgctggcggccgc
atggccacgggcggcgacgacggcggcgtccgactctggcagccccggcgggaggccgcg
gaggcggtccccgccgttgcagcgctggggtccccggagcgtccgcgggccgtgctgcta
gtggggccgcggcgggtgctggtgctgggcgaggcgggcgggctggcgacattcgaggtg
gctcaggggcgctggacgccggtgctgcaccccgccgccagcggaccccgcgccctgctg
gcggctaccccgctgcacggatgggacgagacgctctgcgccgtggccggcggcgatggg
cgccttctccttttcgccttgagccgccccggagccgccgccaagctcacgctgttcgag
ggggccgtgcacgggctgagctgggccccccgtcccgggctgtcccccaacaccgctgct
gctctcttggcctccggtcctggcggggagatgctctggttggatgtcacccaccgcccc
ggacaggcaccctgggtgcagctcatgggtcggtacctgctgcccccctgcaagcagcgc
tggcacacctgtgccacgttcttgccccagaaagggctcctggtctgtggggaccgccgg
ggctccctcctcctcttctcttgcagcagctccttggagcgggctgcagaaagcaccgac
attgtcaatggtgccattgaccccgttgttgaagactccagcagtgagttggagccctct
tgcttgttgcacaaagaggctcttcctcttgagtctccactgtcagtgctctttggactc
cacgggaagacaggagttacctcggtgaccatccacaggggctacatttacagcacaggc
cgggatggtgtctaccaccagctccgcctgcgggaccagcagctggaggtcctgcagaag
cacaggccctgcaaagggctgcagtggattgaggagctgcaattcacctcggatggggac
ctgcttgtgctgggctttcacgctgacaacttcgtggtgtggagcagcaggactggcgag
aacatccactgcatcccttgcgggggcgggcaccgctcctggagctactgcagcagcccc
ttggctgaggtgtttgcctttatcaagtctggggatgtgatgctgcaccaccgtgaggcc
gagccctgcgagcagcaagtgctgctggcatccctgcacgggcgggagatcacctgcgtg
cggcgcctgggggccgtggaggtgcctggccgtgccactcttaatgtgtttgtcaccggc
agtgaggacaccacgatctgtgtcctggtgctcagtgagaactctcgggcagctgtgccc
cttgcccgcctcagtgaccacatttccagtgtgaggacgttggcatttgccatgggacct
ggagatgagagctttggtgatgagggcttgtctgccctgctcttctctgcaggcggccgt
gcacagattgagtgctacaggctgctgtgcaccggggacacagcgactgagagtgctgtg
gcctgccaggtcatccacgtggcttcccaccggctggacaagcactgggagcacaagaag
aacaggcacaagcttgttaagatggacccagagacaaggtacatgtccctgtcagttgtg
cctgggacgagcaccaagcagttgccaacaccctggaaattcctggctgctgcctgcagt
gatgcatcagtccggatctttgggctgctggaggctgctcggaagttggtgctggtggca
gagtcatttcaccaccagcgctgtgtgctgaaggtggaagcgttcctgcacacatgggca
ggaggggagaggaggcacctcctgtgcagtgcagccactgatggcagcattgccttttgg
gacatcaccagccccatcatggatgcggcagatgccctgcaccaagcagagggagagatg
cagcccttgggcctgggcgccccactggtcaccatcatggcccacagctgtggcgtgaac
agccttcacatccgtgagacacccgagggacagtacctggtggccagtggcagtgatgat
ggctccatccatgtctgcctgctggaggtatccctggacagagatgaggccatggcagga
acctgcctgcaggtcctggagcgggtgtccaggccctgtgcccacgctgcccacgtgacg
ggcatccgggtgctgcggccagacctgctgctctctgcctcagtggaccagcgcctgacg
ctgtggaaccgcagcccaagcgagctggtgcccctcagcaccaccttcttccatgtgcct
gacctggctgagctggactgctgggaggtggtggacgccgggggtgagctgcggtactac
tgcgtgctctctgggcagggcctggagatgctgtgcggcacagcctcctccaaacctcct
ccacaagaggctcctcagtaa
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