Lonchura striata (white-rumped munia): 110470744
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Entry
110470744 CDS
T05897
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110470744 (TRPA1)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110470744 (TRPA1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110470744
NCBI-ProteinID:
XP_021386287
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Position
2:complement(119481963..119512475)
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AA seq
1126 aa
AA seq
DB search
MKRSLLRLCRPRDKAAAASAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKVLVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHSSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNRKVKDGEDIFYEPLTILNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNNSFF
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgcccgcgggacaaggcggccgcggccagcgcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgtggcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgtaggctacggagcttcattaagaagaatcgttctggg
cttacaaaagtggatgaattaaatgccaccccacttcatcacgctgcagaaggagggcaa
atagaactcatgcagctgatcatagatgattcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactacactgggccacgaagaaaaaccaggttgaaagcgttcgt
ttgcttctcagcagaggagccaatccaaacatcctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcacaacgaaattgtgaaggttttagttcaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctataattgtagcgtgttacaag
gacaatcctgaagcactgacacttctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacaggatgtatgcctatccatgcagcagcattttcaggtgcaaaaacatgcctggaa
attcttttgaaaaaaggtgaagaattgggtcactctgctaaaacccacatcaattttacc
aataatggaaagtgcagtccacttcatctggcagttcagagtggtgacctcgaaatgatt
aaaatgtgcattgaatttggagctcaaattgatctaaaacagaatgaaaaatgcacggca
cttcattttgctgccactcaaggagcgacagagattgtaaagctaatgatgtcatcctac
gctggggaggaatccattattgatgctgtagatgggaataaggaaactttgcttcacaga
acagcactgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccacttctcctggccacttcctgtgcatcatgg
aaaattgtgaatttactgctttcgaaaggagcaaatgtgtctttaaaagatcatcttggt
cggaatttcttgcatttgactgtattgcagcctggaggactacagcatctgaatgagaaa
tatctgcagatggaacatattaaaaatcttgtcgtggatgaagataatgaaggatgcact
ccattgcattatgcatgtagacaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcgccattacactttgctgccagc
tatgggcgtatcaatacttgccaacgacttataagagatatgaaagacacaagacttctg
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagagaggggctctcttcctctgtgattataaaggctgg
acagccctgcatcatgctgcttttggaggatacactcgcacaatgcagataattttggat
actaatgtgaagtgtactgacagagtggatgaagaagggaacacagctttgcacttggct
gcacgagaaggacatgcaaaagcagtgaggttacttcttgactatggcgcaaaaattctg
ttcaacaaagcagtagcttcttttttccatgaagcaatacacaataggagaaaagatgtg
gtgtctgccgtcatcttgcacaaaagatgggaagaagctgttgtgactttctctcactct
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttttat
attgaatataacttcagatatcttcagtgtcccttgacacttaacaggaaagtaaaggat
ggtgaagatattttctatgaaccacttacgattttaaatgccatggtgcgccacaatcgc
atggagctactcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
gggtttcgagcacatttaatgaacttaggcatatattctcttggtctcattcccctgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagagctttatgaagca
agaccattagaatatgaggactcatacttcacaagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctactggactggacaatttatactacaagcataatttttgtg
tcttctttatttattaataccccagctcatttgcagtgggaatgtggagcaattgctgta
tacttgtcctggatgaacttcttgctgtatcttcaacgatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttgattcggattgctgtggttttctttttc
ctgatactggcctttgggctgagtttctttgtccttttgggttcacagcaaacatacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcctttactcagcagtgaattgccatatccattcctgagttacaca
gttctcattatatttaccttgcttattccaatccttcttatgaacttgttaattggcttg
gctgttggtgatatcgctgaagtacaaaaatatgctgcactcaaaaggattgcaatgcag
gttaatcttcataccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccaagatactgtggatttatgagcgtgttc
caatattgctttgggtgtgaggactctaccacatatgcacagagccctgatacaacacta
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaaaaggcagttagagcacaagaat
agtaaatgggatacagtgttaaaagctgtcaaaacaaatgtacctaacccaagcacagaa
aagaacaacagcttcttctag
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