Lonchura striata (white-rumped munia): 110470760
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Entry
110470760 CDS
T05897
Symbol
NUP58
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110470760 (NUP58)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110470760 (NUP58)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110470760 (NUP58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
FapA
Tox-ODYAM1
NET2A_C
Nup49_C
Mitofilin
PSY3
ASNSD1-SEP
GAIN_ADGRA3
Motif
Other DBs
NCBI-GeneID:
110470760
NCBI-ProteinID:
XP_021386321
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All DBs
Position
1:47691394..47726729
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AA seq
600 aa
AA seq
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MSTGFSFGAGTLGSTAAAGAGGTGAVGGFSFGTATPSSTGGLNFGTLGSSTATTTTSAPS
LGFGSGLFGAKSTTGFTLGSTSTAGTATTIATGLTLGTPATTSAATTGFSSGFNKPAGSA
TPFALPVTSTSAGGLSLSSALTSTPAAGTSGFTLNLGGTTAPTTTASTGLSLGGALAGLG
GSLFQNTSTAATGLGQNALGLSLGTTAAPSTTANEGLGGIDFSSSSDKKSDKTGTRPEDS
KALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSVVAS
GLQRNILNIDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVEQFEVQLQQ
YRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKMLKDQYLG
YRKSFLGDAMDVFEARRTEAKKWQSAPRITTGPTPFSNIPNAAAVAMAATLTQQQQPATG
PQPSLGVSFGTPFGSGIGTGLQSSGLGSSSLGGFGSSSAFGSSATGASSFGFGTTSKPSG
SLSAGFGSSTTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgggcttctccttcggcgcgggcaccctgggctccacggcggccgccggggca
ggaggaacaggagcagtcgggggtttttccttcggaaccgccacgccgagctcaacagga
ggacttaattttggaactctgggctcttctactgctacaacaactacgtcggcaccttca
ctgggttttgggagtggactttttggagcaaaatcaaccactggctttacactaggaagc
accagtacagcaggaacagcaacaactattgctacaggactgacattaggcacacctgcc
accacatcagcagctaccacaggctttagttcaggtttcaacaaacctgcaggttcagct
acaccatttgctttacctgttacttctacctcagcgggtggtctgtcattatcatctgcc
cttacatcaactcctgcagcaggaactagtggctttacattaaatttgggtggcacaact
gctccgactacaactgcttccacaggcctttccttaggaggagccttagcaggcttagga
ggttcacttttccagaatacaagcacagcagcaacaggacttgggcagaatgctttgggt
ttgtctctggggacaactgcagctccttcaactactgccaatgaaggtcttggtggcatt
gattttagcagttcttcagacaaaaagagtgacaaaacaggaacaagaccagaagatagc
aaagcactgaaggatgaaaatctacctccagtaatatgtcaagatgtagaaaatctacag
aaatttgtgaaagaacaaaaacaagttcaggaagaaattagtagaatgtcctctaaagcg
atgcttaaagtacaagaagacattaaagctttgaaacagcttctctctgtagttgccagt
ggattacagagaaacattcttaatattgacaagctgaaagtagaaactgcacaggagcta
aagaatgcagaaatagcattgcgaacacagaaaactcctcctggtcttcagcatgaaaat
acagccccagcagactacttcagaatcttggtcgaacagtttgaagtacagctgcagcag
tacaggcaacaaattgaagaactggaaaaccatcttgccactcaagcaaataattcacac
ataactccacaagatttgtctatggctatgcagaaaatctatcaaacattcgtagcttta
gctgcgcaacttcagtcaatacatgaaaatgtaaagatgctcaaagaccaataccttggc
tacaggaaaagctttctgggagatgccatggatgtgtttgaggcaagacgaacagaagct
aagaagtggcaaagcgcgccacgcattaccactggaccgacccctttcagcaacatacca
aatgcagcagccgttgcaatggctgcaacacttactcagcagcaacagcctgctacaggg
ccacagccatctctgggagttagttttggaacgccattcggctcaggtattggcactggc
ttgcaatcaagtggcttaggttcttcaagccttggaggatttggaagtagctctgccttt
ggaagtagtgccacaggagcatcatcatttgggtttggaactacaagtaaaccatcagga
agtctaagtgcaggctttgggagctcgactacatctgggtttaacttcagcaatcctggt
atcacagcatcagctggcctgacgttcggggtgtctaatcctgcgtctgcaggctttggg
acaggagggcaacttcttcagctgaagaaacctccagctggaaacaagcgagggaaaaga
tag
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