Lonchura striata (white-rumped munia): 110470783
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Entry
110470783 CDS
T05897
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110470783 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110470783 (UIMC1)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
110470783 (UIMC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Motif
Other DBs
NCBI-GeneID:
110470783
NCBI-ProteinID:
XP_021386362
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Position
13:complement(15028059..15068035)
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AA seq
812 aa
AA seq
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MPRRRKPAVGLESRGQDGEEEEEEKRNPANAKKKRSFVDAFIVISDSDGEQESKEESGLQ
KKRTKQLDRTKFAAKKKIAQMTEEEQFALALKMSEQEAREVNCQEEEEEELLRKAIAESL
SSCQPSDSSTASPQLSVEALDSQGQSQPAEKEGSEILGGLAFCPDTPPSDCSSHSQSSRA
DGNGQMDVAWSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPVTRSSEKSSSPEKSDSSNM
LPSTLGEDFTSLSPTFGKVASGGSWRLTPRRLFTSPSSSSEAAGHEPKEQLLPCTGYSAG
EAGAESSATLWKSRTTEQCDSPRSGGGAGTKHSSQPGHAAKVCVSTEQAQQNEGSGSTPD
LCMLTVVEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKEAQRQL
LHKKEFGNPIVPSSSLSQNELGKEEEISRENGVADGTEDGDTEGQESENNPWLHPSKRRD
AESPGHSMEEEKNSTSDDEPTTSYCQPSQILPAEDVPEDGEPVQISQSISIMTPLGSKRS
PDTATENAAEEAISICPETQPSPLEAVEEESEELCLDGRGAPMQVGEDEDAGRTVSECSA
PAAARVSCPLCDHSFPAGEIEVHAMYCNGAAGPEPGEDAPVLTRRQREARNKAASGKSSP
PSSDIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRRAKDTGRQKRGLLRML
ELSESKSEGADAETPLTGLGDQQSSPTLAAADGEPSADSPISLQHRPSHVSPAKPSISLE
AMDGVVDSELPMALHGGSQQRPKGCRRRRHKF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaggaagcctgcagtgggcctggagtctcgaggtcaggatggggaggaa
gaggaggaagagaagaggaacccagccaatgccaagaagaagcgcagttttgtggatgca
tttattgtaatatctgacagcgatggagagcaggagtcaaaggaagagagtggcttgcaa
aagaagagaacaaagcagctggatcgaacaaagtttgctgctaaaaaaaaaattgcacag
atgactgaagaggaacaatttgcactggccctgaaaatgagtgagcaagaggctagagaa
gtgaactgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagcctt
agtagctgtcagccctcagactcgtcgactgcatctcctcagctgtcagtggaagcacta
gattcacagggccaaagccagcctgctgagaaagaaggctctgagatcctgggaggcctg
gcattctgccctgacacccctccctctgactgcagctcccactcacagagctccagagct
gatgggaatggacagatggatgtcgcctggagccccttggtagtgttgaggaggttaagc
caggaaatcgttgaaagctctctagtatccagcataatcgtgtctccggggaagggccag
ccagtgacaaggtcaagtgaaaagtcttcctcaccagaaaaaagtgattcaagtaacatg
ttacccagcactctgggagaggacttcacgtctttgagtcccacctttggcaaggtggct
tcaggaggctcctggcgactgacacctcggagactgttcaccagcccctccagctcttct
gaagcagcaggccacgaaccaaaagagcagctcctgccctgcactggctattctgctgga
gaagctggtgctgagagctcagccacactctggaagagcaggaccacagaacagtgtgac
agccccaggagtggtggaggagcaggtaccaaacacagctcacagcctgggcatgctgcc
aaggtctgtgtttccacagagcaagcacagcagaacgaggggtctggcagtaccccagat
ctttgcatgctgactgtggtggaggagaagcacaaacaggaggaggcaagagacacagtg
cactattattggggcatccccttctgccccaaaggggtggaccccaaccagtacaccaaa
gtcatcttgtgtcagctggaggtttaccagaagagcctgaaggaggctcagaggcagctg
ttgcataagaaggagtttggtaacccaattgtgcccagttcttccttgagccaaaacgag
cttgggaaagaagaggagataagcagggagaatggggtggctgatggtacagaagatgga
gacacagaaggacaggagtctgaaaataatccctggctccacccttcaaagaggagggac
gcagagagtccagggcacagcatggaagaagagaagaactccacttctgatgatgaaccg
accaccagctactgccagccctcccagatactgcctgcagaggatgtgcctgaagatggg
gaacccgtgcaaatttcacagagcatctccataatgaccccacttggcagtaaaaggagc
ccagatactgccacagaaaatgctgctgaagaagcgatctctatttgcccagagacacag
ccaagcccactggaagctgttgaggaggagagtgaagagctctgtttagacggcagaggt
gcacctatgcaggttggtgaggatgaagatgctggcaggactgtgtcggagtgcagtgct
ccagctgctgcccgtgtgtcgtgccctctgtgtgaccacagcttcccagctggcgagatc
gaggtgcacgccatgtactgcaacggcgcggcggggccggagcctggcgaggacgctcca
gtgctcacccggcgtcagagagaggcaagaaataaagctgccagtggtaaaagcagccca
ccatcctcagacattgacaagtgtgagaagtgctacctctgtaagtcactggtgccactg
ctgcagtatcagaggcacgtggacagctgccttcaggctgctaggcaagctcagggaacc
aggaggctgcgaagagccaaggacactggaaggcagaagagaggactcctcaggatgctg
gagctctcggagagcaagtctgaaggtgctgacgcggagactcccctcactggattagga
gaccaacagtcctctcccacactcgcagctgctgatggggagccgtcagcagacagcccc
atctcccttcagcaccgtccttcccatgtctcccctgcgaaacccagcatctccttggaa
gccatggatggtgtggtggactcagagctgcccatggctctccatggaggcagccagcaa
cggcccaaaggctgccgccggagaaggcacaaattctga
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