Lonchura striata (white-rumped munia): 110470802
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Entry
110470802 CDS
T05897
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X1
KO
K09103
early B-cell factor
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110470802 (EBF1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110470802 (EBF1)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
110470802
NCBI-ProteinID:
XP_021386400
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Position
13:complement(14351314..14617522)
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AA seq
617 aa
AA seq
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MFGIQESIQRSGSSMKEEPLGAGMNAVRTWMQGAGVLDASTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGNAGMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQGRWKHRRWLLPAAPGQPR
QWGIPGGLCPKLSSCTE
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaagcatccagcggagtgggagcagcatgaaggaagagcccctc
ggcgcggggatgaacgcggtgcggacgtggatgcagggagccggcgtcctggacgccagc
acggccgctcagagcggagtgggtctggcccgggctcacttcgagaagcagccgccttcc
aacctgaggaagtccaactttttccacttcgtcctggctctgtacgaccggcaggggcag
cccgtggagatcgagcgcaccgccttcgtgggcttcgtggagaaggagaaggaagccaac
agcgagaagaccaacaacgggatccactaccgcctgcagctgctctacagcaatgggatc
aggacggagcaggatttctacgtgcgcctcatcgactccatgaccaagcaggcaatagta
tatgaaggccaagacaagaacccagaaatgtgccgagttctgctcacgcatgaaataatg
tgcagccgctgttgtgacaagaaaagctgtggcaacagaaatgagactccatcagatcca
gtgataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaaa
aatgcaggaaaccctcgagacatgcgtcgattccaggtcgtggtgtctacaacagtcaat
gttgatggccatgtgctggcagtgtcagacaatatgtttgtgcacaacaattccaagcac
gggcggagagctcgaagactcgatccctcggaaggtacgccttcttatctggaacatgca
gctacaccatgtatcaaagccatcagtccaagtgaaggatggactacaggaggtgccact
gtcatcatcataggagacaatttctttgatgggttacaggtcatattcggcaccatgctg
gtttggagtgagctgattactccacatgccatccgtgtacagacgcctccccgacatatc
ccaggggttgtagaagtcacattgtcctacaagtctaagcagttttgcaagggaacgcct
ggaagattcatttacacagctctgaacgaacccaccattgactatggtttccaaaggtta
cagaaggttatcccccggcaccccggtgaccccgaacgcttgccaaaggaagtaatactt
aagagggctgctgatttagtagaagcactctatggtatgccacataataaccaggaaata
atcctgaaaagagctgcagacatcgccgaagcgctctacagcgtcccccgcaaccacaac
cagctccccgccctcgccaacacctccgtccacgcgggaatgatgggagtgaattccttc
agtggccagctcgctgtcaatgtctccgaagcctcccaagccaccaaccagggtttcact
cgcaactccagcagtgtgtcacctcatggctacgtgccaagcaccaccccgcagcagaca
aactacaactctgtcacaacaagcatgaatggctatgggaacgctggaatgtcaaattta
ggcggttctccaaccttcctgaatggatctgctgccaattctccctatgccattgtgcca
tcaagtccaacaatggcctcctccactagcctcccctccaactgtagcagctcctccggg
attttctccttctcaccagccaacatggtctcagcggtgaaacagaagagtgcgtttgcg
cctgtcgtgagaccccaaacctccccccctcccacctgcaccagcaccaatggcaatagc
ctgcaaggtaggtggaagcacaggaggtggctgctcccagctgccccagggcagccaagg
caatgggggatccctggtgggctctgtcctaaactttcctcctgcacagagtaa
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