Lonchura striata (white-rumped munia): 110470880
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Entry
110470880 CDS
T05897
Symbol
RTTN
Name
(RefSeq) rotatin
KO
K16484
rotatin
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lsr03037
]
110470880 (RTTN)
Cilium and associated proteins [BR:
lsr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110470880 (RTTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTTN_N
GRIP
Motif
Other DBs
NCBI-GeneID:
110470880
NCBI-ProteinID:
XP_031359852
LinkDB
All DBs
Position
2:95723074..95801909
Genome browser
AA seq
2230 aa
AA seq
DB search
MELSALVRKLGHELTEIRERSLKTILFKLDHNLISYADLVHEKALFRNLLEWFNFPVVPI
KEEVLNFVNSLIKHPPAAQKMVGIGAVEFFSQLRSDVDPNLQAIIDGIVDRLFFLSSELP
SSPSVCYQAQSQPSVDQPVLPQEELFTGYFCQSRSHLPQLEISPKRTVVKCLKFSTFPWL
TLTSTDRHVLSSNESSLRSNNQSLIWSTCELLQDVIMQDFPAEIFLQRPKIVQSLLSLLN
LAFGGDGRHQLALQAVSCLQQLCIFLRSRLNFHRDPSFSSSEQGTASQNSSISYCQEARG
APHSQNPSPGSSSPRPSVIGRTVQRPRGDGQDWDAVSSSGNSTQANANSRISLHSPFDVG
HIDLPDIENEDTLELQMKQLSLPQFCVSILENAIPLLRTGSRRMTMEVLELLVEDMSLIG
DAISENVWEDDSLFALELKDKLLLVLGLLGETILYHKSNISAEQPKVMLVHHRMTFISIS
LFTVRLLQVLLPVEKASKVTQKSLLNALFVLSLDMSFSLEYPSIHESIAAYLEQMSTENY
SIYKQVSEAAYSIECTSNFMVEVHKEGDKNLSELLELAGQALSSLPFHLHFPLLQECIHI
CSNIWKSDEANSLLQVEGQKLLLHLLSHPLLNVKAEAYHCCLEVVKDCLGIHNIAKPMPS
ISQGVHFLLHPKVLYEICTFGLQEDKNEVNSTAKSILIHLLQGRLMMEVLTWNKFTEALC
PVIPVLQGYADTKDTLGKCILSLSETTSDKGEGVLPATPRLQAALRLLFSKKQLVRSVAA
KHLAFHVLNEEGANLKRPCLDSNVLSSIANLFIIEGAMELKLDDKMNSIIKAETVEKLYD
ILTSDAVDLVLRKSAAEQLVVILEDTKMHDIVKRLGVIEKILAYLNECVRVDGKLMESVV
VPCLTLLRKIVSADPEVRLSLAQQPSLLLLLFRVSLILQGDRAVLTETTVLLCLLLFDGI
ARTETWADGIASNNTEVPAFSLPVAVVRRYHLPVRITAHHVVSPNTVVVPLSSECLAMKP
VTDMLKMAWNLSWYHGIENLLQLINYEKETETFLDSLKLSPEDILILKVTHTNYGLQDCL
SLIIQAASHSDVRTALTRLSFYVLNDRLALKCSFGPCGTTLKSSVWQKAMNRFLQVLPAS
VEDEKLLVDVLRFFNKLLREQKSNLESDHLKWILKSLLKNQPKSLMGLLVRQDSQVQDEM
DETQAAVRQQLDKELIRLFNLLLVYSMSVTDRESLELAGLFRTELALKLLQCLRLTDAPH
FYGLPSLERTLQGMVHVTALPGWSTYSAAVEPVTICKKYLTGLLEVISSFYVEWGGNAMS
FMGKGVTKSTVLCLLHLSHEMMAQAKDTDWISLWSLPYDSGEEQVLSHLGLAWLVPLWVD
RDPEVRFTALGIGSALTSIEIGCIALAESCQNISGGLWGTVINILLDQSECSMVRREAAF
ILQNLLVIPIPTEDTKDCIWQGPCVHDEESGLSQTGIPALKALLYHCQFYEHVNQMVKRC
YLGCYMFDLNSYKEDKLSIEKGGTTDFDDSLNLWKPPPSQRKSSHSHSTSQTMILSASPS
LGSVAELQATVPSSASFIPETVVDRLTAQGQSDTTITESPSQHDSPMSAALSKQCAVVTP
ALLSAVCSFLHNLLVVMPKDTGIALQQTHLLTTLSSLVSANLVERCILELKAPLGHRCHI
ENVKAQVLLLLQYLSSVSRLLKSCLLVDSQLVIQDELLKPLLENTFRILTIHPKAGLDTE
LKSVLYETWVDSFSLLATLLWKSGQISFPSVTAALANHCTAIIDTISDCIHLSTTYPALY
VASLQFLSVLLNEEGRKQLQDKQSVCQNPTISFLLDHTEECQAPVTQLTALIIQVCERKS
SKDVLKEVATNALLSLLAVSKNAQRCALEADLIDSWIENMKHIHAQLNLDSLKPGKAQRK
KEDNLIKELRCSMQFLRNCLFQNEECKMAALKAHLVPVLHSLWPWLLADDSSMQIALHLL
CVYTANYPAGCASLCWASGGQSSLPSARSAAGNSLMHYILKLASHVSNDSSPVQQVVFCL
ISNLALSHDCRGIIQKSNFLQNFLSLSLPKGSNKNSGNVSTLWLKLLLNISFGEDGQQMV
MKINGFLDQIIEMCKYKHKSSQHLALLILHNICFSPANKPKILGNDQAVAVLSSCLESNS
PAVQRIGAASLWALLHNYQKAKVTLKNPSIRRRIDEAYSLVKKSSPQPEENELHAYHVKC
LENIVQLLDC
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggagctgtcggcgctcgtcaggaagctcggtcatgaactgacagagataagagagcga
tctttgaagactattctgtttaaactagaccacaatttgatttcctatgctgatctggtc
catgaaaaagcactttttcgtaaccttttggagtggttcaatttcccagtcgtgccaata
aaagaggaagtgttaaattttgtgaacagtttgatcaagcatccacctgctgcccagaaa
atggttggaattggtgcagttgaattcttctctcagcttcgctccgatgtggatccaaat
ttgcaggccataattgatgggattgtggatagactgttctttctttcttctgaactccct
tctagtccttcagtatgttatcaagctcagtctcagccttcagtagatcagccagttctg
cctcaagaggaattattcactggatatttttgtcaaagtagaagtcatctgccgcagtta
gaaatatctcccaaaagaacagttgtgaaatgcttaaaattttccacctttccttggcta
actctgacttcaacagatagacatgttctttcatcaaatgaaagctctttgagaagtaac
aaccaaagtttaatatggagtacatgtgagcttcttcaggatgtgattatgcaagatttt
cctgcagagatcttccttcaaaggccaaagattgtacagagccttttgtctcttctaaac
ttggcttttggaggagatgggaggcaccagttggctttgcaggctgtgtcttgcttgcaa
cagctttgcatctttttgagaagtaggcttaacttccatagagatccaagtttttcttcc
tcagagcaaggcacagcttcccagaattcatctatatcttactgtcaagaagcaagaggt
gctcctcattctcagaatccatcacctggaagcagtagtcctcggccctctgttattggc
cggacagttcagcgtcctagaggagatggtcaagattgggatgcagtatcttccagtgga
aacagtactcaagcaaatgcaaactccagaatctctctgcattccccatttgatgtagga
catattgacctaccagatattgaaaatgaggacactttggaattacagatgaagcagctt
agccttcctcagttctgtgtttccatcctggaaaatgcaatacctcttctaagaacaggc
agcaggagaatgacaatggaagttcttgaattgcttgttgaagacatgtctcttattggt
gatgctatttctgaaaatgtttgggaagatgacagcctttttgcattggaattgaaagac
aaattgcttctggtcttgggtttgcttggagaaactatattatatcacaaaagcaatata
agtgcagaacagcccaaggtgatgctggtgcatcacagaatgacatttattagcatttca
ctcttcactgttagattgctccaggtacttctccctgtagaaaaggcgagtaaagttaca
caaaagagtttgctgaatgctttgttcgttctctcactggatatgtcattctccttggaa
tacccaagcatacatgaatccattgcagcctatctggagcagatgagtaccgagaactac
agtatttataagcaagtttcagaagctgcatattcgattgaatgcacttctaactttatg
gttgaagttcataaggagggggacaagaatctttctgaattactagaattggcaggtcag
gctttgagtagtctgcccttccacctacactttcccttgcttcaagaatgcattcacata
tgctcaaatatttggaagtctgacgaggccaactcactgcttcaggtggagggtcagaag
ttgcttctccatctattgtctcatcctttgttgaatgtaaaggctgaagcctatcactgc
tgtttggaagtggttaaggactgtctaggtattcataatattgcgaagcccatgccttca
atctcccagggagtacatttccttctacaccctaaagtgttgtatgaaatctgtacattt
ggccttcaggaagataagaatgaggtgaactctacagccaagtccattctgatacatctg
ttgcaaggacggttaatgatggaagtattgacttggaacaagtttactgaggccctctgt
cctgttattcctgttttacagggttatgctgacacaaaagatactttaggtaaatgcatc
ctctctttgagtgaaacaacctctgacaaaggagagggcgttctcccggcaactcccagg
ctacaggctgctctgcgccttctcttctcaaaaaagcagctggttcgttctgtagcagct
aaacatttagcattccatgttctcaatgaagaaggggcaaacctgaaacgcccatgcctg
gatagtaatgtcctttccagcattgcaaacttatttattatagagggagctatggagcta
aaattggatgataaaatgaactcaataattaaggcagaaactgttgaaaagctgtatgat
attttgacttctgatgcagttgacctagttttacggaagtctgcagctgagcagctggtt
gtcattttagaagatactaaaatgcatgacattgtgaaaaggttaggtgtgatagagaag
atattggcctaccttaatgagtgtgtacgtgtggatggcaagcttatggaatctgtagtg
gtaccgtgtctgacactcctacgcaaaattgtgtctgctgacccagaagttcgcctgtcc
ctggcacagcaaccttctctactgcttttgctattcagagtttccctgatactccaaggt
gatcgtgctgttttaactgaaactacagtattgctttgtcttctgttgtttgatggaata
gcaagaacagaaacgtgggctgatggtatagccagtaataatactgaggtacctgccttc
agtttacctgttgctgttgttagaaggtatcatctcccagtcaggatcactgctcatcat
gtagttagccccaatactgttgtggtgccactgtcttctgagtgcttggctatgaaaccc
gtgacagatatgcttaagatggcttggaatctgtcatggtaccatgggattgaaaaccta
ctgcagctgataaattatgagaaggaaacagaaacatttttagactctctaaaactttcc
ccagaagacattcttatattgaaagtaactcacacaaactatggactgcaagattgcctt
agtttgatcattcaggcagcatcccacagcgatgttagaactgctctcactaggcttagc
ttctatgtcttgaatgacagacttgcattaaaatgcagttttgggccttgtggaaccact
ttgaaaagctctgtttggcagaaagcaatgaacaggtttctacaagtgcttccagcttct
gtggaggatgaaaagcttttggtagatgtcctaagattttttaacaaattgcttagagag
cagaaatcaaatctggaatcagatcatctaaagtggatcttgaaatcattgcttaaaaat
cagccaaaatcccttatgggccttctggtgcgacaagattcccaagtgcaggatgaaatg
gatgaaacacaggctgctgtcaggcaacaactggataaagaactcattcgcctttttaac
ctgctgttagtttattccatgtcagtgactgacagagagagcttggaacttgctggcttg
ttcagaacagagctggctctgaagctgcttcagtgcttaaggctaacagatgcaccacat
ttttatgggcttccatcactggagagaacattacaaggaatggttcatgttactgcactt
ccaggctggagtacctattctgctgcagttgaacctgtcacaatttgtaagaaatattta
acaggtcttcttgaggtcatctcatcattttatgttgagtgggggggaaatgccatgtcc
ttcatgggaaaaggtgtgacaaaaagcacagtcctttgcttgcttcacttatctcacgaa
atgatggctcaagccaaggatacggactggatatctctttggtctttgccgtatgatagt
ggtgaagaacaagttctgtctcatctaggtctggcatggctggttcctttatgggtagat
agagatcctgaggtcagatttacagcacttggaataggatcagctcttacatctattgaa
ataggatgcattgctttagcagaaagctgccagaatatttcaggaggcctgtggggaaca
gtgataaacatccttctggatcaatctgaatgtagcatggtacgcagagaggctgctttt
attctacaaaatctacttgtgattccaatcccaacagaagacactaaagattgtatttgg
caaggtccttgtgtacatgatgaagaatctggcctctctcagacagggatacctgctctt
aaagcccttttgtatcactgccagttctatgaacatgtgaatcagatggtgaaacgctgt
tacctaggatgttacatgttcgatttgaattcttacaaggaagacaagctcagcatagaa
aaaggtggtacgactgattttgatgattctctcaatctttggaagcctccacctagtcag
agaaaatcttcacattctcactcaacatctcagactatgattctgtctgcatcaccatca
ctgggaagtgttgctgagcttcaggcaacagttccaagttcagccagttttattccggaa
actgtggttgatcggcttacagcacaaggtcaaagtgatacaaccataacagaatctcca
agtcaacatgattctcctatgtctgctgctctgtctaaacagtgtgctgtagtcacacct
gcccttttgtcagctgtttgcagctttctgcacaatctgctggttgtgatgccaaaagat
actggaattgcccttcaacaaacgcatttgctaacaactctcagcagtcttgtaagtgct
aatctggttgaaagatgcatcttggaactgaaagctccattgggtcatcgatgtcatata
gaaaatgtaaaagctcaggtcttgttattacttcagtacttgtcatctgtgtccaggctt
ctgaaatcatgtttattggtggactctcagcttgtaatccaggatgaactgctgaaacct
ctgttagagaataccttcaggattctcaccatacatcccaaagctggcttagataccgag
ttaaaatctgtactttatgaaacttgggtcgactctttcagccttctagctacattactg
tggaaaagtggccagatatcttttccatctgtgacagcagcccttgcaaatcactgtaca
gcaataattgataccatttctgattgtattcatctgtctaccacatatcctgctttatat
gtggctagtttacagttcctctctgtccttttgaatgaggaaggaagaaaacagctccag
gataaacagagtgtatgtcaaaatccaactattagctttcttctggaccacactgaagaa
tgccaggcaccagtaactcaacttactgctttaattattcaggtctgtgaaagaaaatct
tcaaaggatgtgctgaaagaagttgctacaaatgcactgttgtctctgttagctgtcagt
aaaaatgcccagagatgtgctttggaagctgacctgatagacagctggatagaaaacatg
aagcacattcacgcacagctgaatttggattccctaaaacctgggaaagcacagaggaaa
aaggaggataacctcatcaaggagttaaggtgttctatgcagttccttagaaactgcctc
tttcaaaatgaagaatgcaaaatggcagcactcaaagctcatcttgttcctgttctgcat
tctctgtggccctggttgttagcagatgactcctcaatgcaaatagctctgcatttgctt
tgtgtctacactgcaaactatcctgcaggttgtgcttcactttgttgggccagtggtgga
caatcatcacttccatctgcacgaagtgcagctggcaattcattaatgcattacatcttg
aaattggcttcccatgtgtcaaatgatagcagcccagttcagcaggtggtcttttgtcta
atatccaatcttgctctgtctcatgactgtagaggcattattcagaagagtaacttcctg
cagaactttttatctctttcattgccaaaaggaagtaataaaaattctggtaatgtgtct
actctctggcttaagctgctactgaacatatctttcggagaagatggacaacagatggtt
atgaagataaatggctttttagaccagatcattgaaatgtgtaaatacaagcacaagagc
agccaacatctagcacttcttattctacataacatatgttttagtccagctaataaacca
aagatactaggtaatgatcaagccgttgcagtactgtcttcctgtttggaaagtaacagt
cctgctgttcagagaataggagcagcttcactttgggctttgcttcacaactatcagaag
gcaaaagtaactttgaagaatccatctataaggagaagaatagatgaagcttattcttta
gtgaagaaaagttctccccagccagaagaaaatgaactacatgcctaccatgtaaaatgc
ttagagaatatagtgcagcttcttgattgttaa
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integrated database retrieval system
