Lonchura striata (white-rumped munia): 110471125 Help Entry 110471125         CDS       T05897                                  Symbol COL3A1 Name (RefSeq) collagen alpha-1(III) chain   KO K19720   collagen type III alpha Organism lsr  Lonchura striata (white-rumped munia) Pathway lsr04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:lsr00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     110471125 (COL3A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lsr00536]     110471125 (COL3A1) Glycosaminoglycan binding proteins [BR:lsr00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110471125 (COL3A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  110471125 NCBI-ProteinID:  XP_021387085 LinkDB All DBs Position 7:7232885..7282128 Genome browser AA seq 1460 aa AA seqDB search MMSSVQKVTLLILAVFQPSVILAQQVVTGCTHLGQAYADRDVWKPEPCQICVCDSGSVLC DDIICDDQELDCPNPEIPFGECCPVCPQTTTPPPRVIVSRGPKGDPGSPGVPGRNGPPGP PGQPGSPGAPGPPGICQSCPSISGGSFSPQYDSYDVKAGGAGIGYPQPISGFPGPPGPSG PPGPPGHAGPPGSAGYQGSPGEPGQPGPPGPPGPVGMIGPVGPPGKDGEPGRPGRNGDRG IPGLPGHKGHPGMPGMPGMKGQRGFDGKDGAKGDSGAPGPKGETGLPGVNGAPGQPGPRG PAGERGRPGNPGGPGAHGKDGSPGAAGPPGPPGPPGTAGFPGSPGFKGEAGPPGPAGVSG SPGERGEPGPQGNAGPPGPQGPPGRAGSPGNKGEMGPSGIPGAPGLPGGRGLPGPPGASG NPGAKGSPGDPGKDGAKGDPGPKGERGENGTPGAPGPPGEEGKRGANGEPGQNGVPGTPG ERGSPGFRGLPGSNGLPGEKGPAGERGSPGPPGPSGPAGERGQDGGPGLPGMRGLPGIPG SPGSDGKPGPPGNQGESGRSGPPGPPGPRGQPGVMGFPGPKGNEGAPGKNGERGPGGPPG PPGLAGKNGDVGLPGPPGPTGASGERGEPGPAGPPGLQGLPGGPGPAGENGKPGEPGPKG DIGGPGFPGPKGENGIPGERGAQGPPGPPGTRGGPGPAGTEGAKGPPGPPGPPGGTGLPG LQGMPGERGASGSPGPKGERGEPGGKGADGLPGARGERGNVGPIGPPGPAGPPGDKGETG PAGAPGPMGSRGGPGERGEQGLPGPAGFPGAPGQNGEPGGKGERGPPGLRGEAGPPGAAG PQGGPGAPGPPGPQGIKGDRGSPGGPGAAGFPGARGLPGPPGNNGSPGPPGNAGPAGKDG PPGPPGSSGAPGGPGPAGIRGEPGAPGEKGPPGARGERGAPGEPGPQGIVGGRGNTGLPG LRGPSGPPGMAGAKGEDGKPGTNGIPGERGAPGPQGPIGQRGLPGEPGRDGNPGSDGLPG RDGSPGGKGDRGESGSPGPPGPPGHPGPAGNAGAPGKSGERGFQGPPGPPGSTGPAGARG PAGPQGPRGDKGEPGERGSNGIKGHRGFPGTPGLPGPPGPLGPQGAIGGPGASGARGPPG PAGPPGKDGTSGYPGPIGPPGPRGSRGESGPAGPPGQPGLPGPAGPPGPCCGAGAIAGAS ALEKGPIVGYGYEYRDEPKENDINLGDIISSMKSINNQIENIISPDGSQKNPARNCRDLK FCHPELKSGEYWVDPNQGCKMDAIKVYCNMETGETCLNANPRTVPRKNWWTSANSGKKHV WFGESMNGGFQFSYGDPELPEDVSEVQLAFLRILSSRASQNITYHCKNSIAYMDHDNGNV KKALKLMSSTESEIKAEGNSKFTYAVLEDGCTKHTGEWGKTVFEYRTRKTMRLPVVDIAP LDIGGPDQEFGVDIGPVCFL NT seq 4383 nt NT seq  +upstreamnt  +downstreamnt atgatgagctctgtgcaaaaagtaactttgctcattcttgccgtgtttcaaccctcagtt attttggcacaacaagtcgtcacaggatgtacccatcttgggcaggcttatgctgacagg gatgtttggaaaccagagccatgccagatctgtgtgtgcgactcgggatctgttctctgc gatgacatcatctgtgatgatcaggagctggactgccccaacccggagattccttttgga gagtgctgtccagtatgcccacaaaccacaacaccacctccaagagtaatagtcagccga ggccccaaaggagaccctggttctcctggagttccaggcagaaatggtccacctggccca ccaggacagccagggagccctggagctcctgggccccctggaatctgccagtcgtgtccc agtataagtggaggtagtttttctccacagtatgactcctatgatgtgaaggctggtgga gctggtattgggtacccacaacccattagtggttttccaggaccccctggccccagtggt ccccctggcccgcctggtcatgcaggtccccctggctctgctggataccagggctcccct ggagagccaggacagcccggccctcccggtcctccaggtcctgttggaatgataggccca gttggtccaccaggaaaagatggagaaccaggaagaccaggcaggaatggagatcgtgga atccctgggttaccgggtcacaaaggacaccctgggatgcctgggatgcctgggatgaaa ggccaacgaggttttgatggaaaagatggtgccaaaggtgacagtggtgcccctggtcca aagggtgaaactggtcttcctggagtaaatggagcaccaggccaaccgggaccaagaggt ccagctggagaaagaggaagacctgggaatcctggtggccctggtgcccatggcaaagac ggatctccaggagcagcaggcccacctggtcccccaggtccccctggaactgcaggattt ccaggctctccaggttttaagggggaagctggtcctcctggtcctgctggtgttagtggt agtcctggagagaggggagaacctggtcctcagggcaatgctgggccacctgggcctcag ggccctcctggaagagctggaagccctggcaacaagggtgaaatgggaccttcaggtatt cctggtgctcctggtctgccaggaggccgtggtcttccaggtcctccaggtgcaagtgga aaccctggggcaaaaggcagtccgggagaccctggtaaggatggtgcgaaaggagaccca ggaccaaaaggcgagcgtggtgaaaacggcaccccaggtgctcctgggcctcctggtgag gaaggaaaaagaggtgcaaatggagagcctgggcagaatggagtacctggtacccctgga gagaggggctcccctggcttccgtggcttacccggtagcaatggacttcccggcgaaaag ggtcctgcaggtgagcgtggcagcccaggtccccctggccccagcggacctgcaggagag cgtggacaagacggaggcccaggtcttcctggaatgagaggcttgcccggaattccagga agccctggaagcgatgggaaacctggccctcccggcaatcagggtgaatctggacgctct ggcccacctggccctccaggcccacgtggccagccaggtgtgatgggattccctggtcct aagggcaatgagggtgcaccaggcaagaatggagaaagagggcctggtggaccacctgga ccacctggtcttgctggaaagaatggtgatgttggccttccaggtcctccaggacctact ggtgcttctggggagagaggagaaccaggaccagcaggcccacctggcctccagggattg cctggtggaccaggaccagctggagagaacggaaagcctggagaaccagggccaaaaggt gatattggaggacctggattcccaggccctaagggtgaaaatggtatcccaggagaacgt ggtgcacaaggtcctccaggacctcctggaacaagaggtggaccaggtcctgctggcaca gaaggtgccaagggtcctcctggcccacctggtccccctggaggcacaggactgcctggc ttacagggaatgccaggagaaagaggagcttctggaagccctggaccaaaaggggagagg ggagaacctggtggtaaaggtgctgatggccttcctggtgcaagaggagagagaggcaac gtaggtcccatcggtcctcctggtcctgctggcccacctggagataagggagagactggc ccagcaggtgcccctggcccgatgggttcccgtggaggtcctggtgaacgaggagaacaa ggtcttcctgggcctgctggcttccctggagctcctggccaaaatggggaacctggtggg aaaggagaaagaggcccccctggtctaagaggagaggctggaccccctggagcagctggt ccacagggtggccctggtgccccaggtccacctggtcctcaaggaataaagggagaccgt ggatctcctggcgggcctggtgctgctggtttcccaggtgctcgtggtctacctggtccc cctggtaacaatggtagtccaggtccccctggcaacgcaggcccggcaggcaaggatggg cctcccggaccccccggcagttctggtgctcctggaggtccaggacctgctggcatcagg ggtgagcctggcgctccaggagaaaaagggcccccaggagcccgaggagaaaggggggca ccaggtgagccaggtcctcaaggcatcgttggcggccgggggaacacgggtctgccaggc ctgcgtggccccagcggcccacctgggatggcaggggccaagggtgaagatggcaaacca ggcaccaatggtatcccaggagaacgtggtgctcctggtccccaaggtcctattggacaa agaggcttacctggagagcctggcagagatggtaaccctggctctgatggcttgcctgga cgtgatggatccccaggaggcaaaggtgaccgtggtgaaagtggctctcctggtcctcca ggaccccctggccaccctggacctgcaggtaatgctggtgcacctggaaaatctggtgaa agaggatttcagggtccacctggccctcctggctctactggtcctgctggtgctcgtggt cctgccggtcctcaaggtcctcgtggtgataaaggtgaacctggtgaacgaggcagcaat ggcataaagggccacagagggtttcctggtacccctggtctccctggtcctcctggtcct ctgggtccacaaggtgcaattggaggtccaggagcttcaggtgcaaggggtcccccagga ccagctgggccacctggaaaagatggtaccagtggctacccaggtccaattggtcctccc ggcccccgtggttccagaggcgaaagcggccctgctggtccaccagggcagcctggtctt cctggtcctgctggacctcctggcccatgttgtggtgcaggtgctatagctggtgcgagt gctcttgaaaaaggtccgattgttgggtatgggtatgaatatcgagatgagcctaaggaa aacgatatcaatctgggtgacatcatatcttcaatgaaatcaattaacaaccagattgaa aacatcattagtcctgatgggtcccaaaagaatccagctcgtaactgccgagacctgaaa ttctgccatcccgagctcaagagtggagagtactgggttgatcctaaccaaggctgcaag atggatgctattaaagtgtactgcaatatggaaactggtgaaacctgcctcaatgccaac cccaggactgtgccaaggaaaaactggtggaccagtgcaaacagtggaaagaaacacgtt tggtttggagagtctatgaatggaggcttccagttcagctatggagatcctgagcttccc gaggatgtctccgaagttcagctggccttcctgcgcatcctctccagccgtgcctcccag aacatcacctaccactgcaagaacagcattgcctacatggaccacgacaatgggaatgtt aaaaaagccctgaaactcatgagctctacagaaagtgagatcaaggctgaaggaaacagc aaattcacatatgctgttctggaagatggctgcactaaacacactggtgagtggggtaaa acagttttcgaatacaggacgcgcaagacaatgaggttgccggtggttgatattgcacca ttagacattggtggtcctgatcaggaatttggcgtggacattggcccagtctgcttctta taa

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