Lonchura striata (white-rumped munia): 110471190
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Entry
110471190 CDS
T05897
Symbol
XPC
Name
(RefSeq) DNA repair protein complementing XP-C cells isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
110471190 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110471190 (XPC)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110471190 (XPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
110471190
NCBI-ProteinID:
XP_021387254
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Position
12:complement(10882301..10892007)
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AA seq
839 aa
AA seq
DB search
MDEDNTDNNDDDDESEDEWEDVEELQEPPDKLEEATVLPSVGLPSNPVEIEIETPEQVKK
RERREKRKAEFEMYLRRMMKRFSKEVREDTHKVHLLCLLANGFYRNRICSQPDLLAIALS
IVPTRFTQVPTGQVGLVYLSNLVKWFVGTFTVNDELSTEKGEPLQATLERRFAIYAAQDD
EELVHIFLIILRALQLLCRLVLSFQPIPLKETRPKAKSSSKRLSHSSTHEGRESSATTPK
AVAKTCPCKKAKQDEKSSESKESNKEPKKPKTAQTGRTHKSKLTKGSQEQKGSNNETSSA
EKDVPVRPKNDRRRRVASKVCYKEESGSDEGSASDFEVSEEESDLSDEDFETVPKRRRSS
QASQNSKLTTVKRSKTETSETRQAENSHGAETKPAKSTTPALPQAQRKRNKIISSDEDDG
QQEVRRAMGTDQWLEVFLEPEDKWVCVDCVHGNVGQPQLCFAHATKPLFYVVGFDNDGSV
RDVTQRYDPVWMTSTRKSRVDAEWWEETLQPYESPYVERDKKEENEFQVKLQDQPLPTAI
GEYKNHPLYALKRHLLKYQAIYPESAAILGYCRGEAVYSRDCIHTLHSRDTWLKQARVVR
IGEVPYKMVRGFSNRVRKARLAEPANRDQEDLALFGRWQTEEYQPPIAVDGKVPRNEYGN
VYLFLPSMLPVGCVQLKLPNLNRVARKLDIDCAQAITGFDFHGGYSHPVTDGYVVCEEYK
EVLVAAWENEQAEIEKKEKEKREKRALGNWKLLTKGLLIRERLRQRYSIKTEPSAPETEK
GGGFSSDEEGAPSSENTVGNTAIYWPQNRQQEKQEEIAAKMSKREKRGEAAQLFPFEKL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagacaatactgacaacaatgatgatgatgatgaaagtgaagatgaatgggag
gatgtggaagaacttcaggagcctccagataagttagaagaagctactgttcttccatca
gtggggctgccaagcaatcctgtcgagatagagattgaaaccccagagcaggtgaagaaa
agagagaggagagaaaaaagaaaagctgagtttgagatgtaccttcggagaatgatgaaa
cgtttcagcaaggaggttcgtgaggacacacataaggttcacttgctgtgtttactagca
aatggtttctacaggaacaggatctgcagccagccagatctcctcgccatcgctctgtcc
atcgtccccacccgcttcacccaagtgcccacaggccaagtgggccttgtctacctttcc
aacctggtgaaatggtttgttggaaccttcactgtcaatgatgagctttccactgaaaaa
ggagagccccttcaggcaacactggagaggaggtttgccatctatgctgcacaggatgat
gaggagcttgttcatatatttttaattattctgagagcattacagctgctgtgtcgtctc
gtgctgtcttttcagcctattcctctcaaggagacaagaccaaaggcaaagagctcatcc
aagaggctgtctcacagcagcacccatgagggacgggagagttctgccacaacacccaaa
gctgtggcaaaaacatgcccctgcaaaaaagccaagcaggatgagaaatcctcagagagc
aaagaaagcaacaaggagccaaagaaacccaaaactgcccagactggaaggacacataaa
tcaaagctgactaaaggtagccaggaacagaagggatcaaataatgagaccagttcagca
gaaaaagatgtgccagtcaggcccaagaacgaccgccggagacgagtggcctccaaagtg
tgttacaaggaagagagtggaagtgatgagggcagtgcttcagactttgaggtttcagag
gaggagagtgatctctctgatgaggattttgaaactgtccctaagaggcggagaagttca
caggcctcccagaattcaaagctgacaactgtaaaaaggtcaaaaactgagacttcagaa
acaaggcaagcagaaaattcgcatggagctgagactaaaccagcaaaaagtacaactcca
gccttgcctcaagcacagagaaagagaaacaaaatcatttctagtgatgaggatgatgga
cagcaggaggtgaggagagcaatgggcacagaccagtggctggaggttttccttgagcct
gaggacaagtgggtttgtgtagactgtgttcatggcaatgtgggccagccccagctgtgc
tttgcacatgccacaaagccgcttttctacgttgtggggtttgacaacgatgggagtgtc
agggatgtgacacaaagatatgatccagtgtggatgacctcaacaaggaagagccgtgtg
gacgcagagtggtgggaggagacactgcagccatatgaaagtccctatgtggagagagac
aagaaggaagaaaatgagtttcaagtgaagcttcaagatcaacctctaccaacagcaatt
ggagaatacaaaaaccaccctctctatgcactgaagaggcacctcttgaaataccaggcc
atctatcccgagtcagctgctatcttggggtactgcaggggagaggctgtctactccaga
gactgcatacacactctgcactccagggacacttggctgaagcaagctcgagtggtgagg
attggagaagtgccttacaagatggtgagaggattttccaaccgggtgaggaaggcgcgc
ctggcagagccggcgaaccgggaccaggaggacctggcgctgtttggccgctggcagaca
gaggagtatcagcctcccatagcagtggatggaaaggtccctcggaatgaatatggaaat
gtctatctcttcttgccatccatgttacctgttggctgtgtgcagctgaaactgccaaac
ctgaacagagtggcacggaagttggacattgactgtgctcaagccatcactggatttgat
tttcatggcggctactcacatccagttactgatgggtatgtggtgtgtgaggagtataaa
gaggtccttgttgctgcctgggagaatgaacaagcagaaatagaaaagaaggagaaggag
aagcgtgagaaaagagctctagggaattggaagctgctgacaaaaggacttctcatcaga
gagagactgaggcaacgctactccatcaagactgagccatcagcacctgagacagagaaa
ggagggggattctcttcagatgaagaaggagctccgagctcagagaacacagtggggaac
acagccatttattggccccagaatcgccagcaagagaaacaagaagagattgcagccaaa
atgagcaagcgagaaaagaggggagaagcagctcaattgtttccttttgagaaattgtga
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