Lonchura striata (white-rumped munia): 110471192
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Entry
110471192 CDS
T05897
Symbol
WRN
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsr03032
]
110471192 (WRN)
03400 DNA repair and recombination proteins [BR:
lsr03400
]
110471192 (WRN)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110471192 (WRN)
DNA replication proteins [BR:
lsr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110471192 (WRN)
DNA repair and recombination proteins [BR:
lsr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110471192 (WRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
SAM_GIDA_C
DUF7553
Motif
Other DBs
NCBI-GeneID:
110471192
NCBI-ProteinID:
XP_021387255
LinkDB
All DBs
Position
4:5035953..5064165
Genome browser
AA seq
1450 aa
AA seq
DB search
MDVVAAGLRGKYPQWMLTESQEESSLGHKKKSGAQRSVLEDGLPFLEFCGSVVYSYEASD
CSLLSEDIRQSLSDGAAVGFDIEWPPAYTKGRMAKTAVIQMCVTEDKCYLFHVSSMAGFP
KGLKRLLEDETIKKVGVGIEGDQWKLMSDFEIKLKSFVELADVANEKLKCKETWSLNGLV
KHLFGRQLLKDQSVRCSNWEQFPLNEEQKLYAATDAYAGYIVYEKLKNMSKSDQKLLSVS
KDATSEGVKERLASLAEELTDLASHIPDSSGQLENFQRAAEILAEISENISALKTTLLGS
GFPSGLERSCGANRTHFVAKSANVQAQNAKCAEQPEGDLNSCSDATLAVLWEEEMSGEEA
QRGNTALENGAPAARFTEEEDRDDFNSLDITEQELQVLERQAAKELVSEAAPEEACSTDN
EQNVSSVIESDEELEMEMLKSLKDVDDCEGVLPKGESSKARKTPDTEVDVAPDGDEDEGI
EEEEEECLDPLLPEPGESHVQCLKTYFGHSSFKPVQWKVINSLLEDRRDNLVVMATGYGK
SLCYQFPPVYTGHTGVVICPLISLMEDQVLQLTMTGIPACFLSSAQSKQVKDSIRGGQYR
VIYMTPEFCSGNLELLQDLNQTVGITLIAVDEAHCISEWGHDFRSSFRNLGMLKKVLPLV
PIIALTATASPSIREDIVKCLDLRNPQVTCTSFDRPNLYLEVGQRSGDICRDLKQFLIRK
GSSSVYEFEGPTIIYCPTRKATEQVVCALNKLNVACGTYHAGMGSKQRRDTHYQFMRDEI
QCVVATVAFGMGINKADIRLVIHYGAPKEMESYYQEMGRAGRDGLPAACHVLWAATDLVS
NRHLLGEIRNEEFRLYKLKMLAKMEKYLVSNDCRRKIILSHFEDRQLRKVSSGIMGTEEC
CDNCRSSGSCLAVPSDFEGGLQDFGKQAHQLLSAVIALDEKFGTRMPILLLRGSCSQRLP
DRYRRHPLFGCGKEWPENWWKLLCQQLIMEGFLKEVAGQANKFATICVLTQKGRNWLSKD
GSASNPSLLLQSSEDLNLQRPSASSRRSPLLSRQRSPGTKGTAQSPGKQISLYEMFSCYR
KGQTPPRSTNMVNSVSGRSPLKSPLKPQGPGVPSREKELETALYGKLLTARQKVANEKEI
PPAVLATNKILVEMARIRPTNIENLKKIDGVSEAKSTMLMPLLSEIKDFCQANGLQTDAF
PTSESKVQKEASPSKCARALSPSEEVTYILFQEKNYSLRAISESRSLPIAEVGTHLCQAL
AAGRTVSLERAGLTPAVQHTIRDVIRSPPILSDTTKIQEIRKLTPANIELYLIKMVIALL
EKENRNKSQDGLGFKRRLVWPEGQQGKTGADQASREGALWNKKQAAGSVDASQAGSRGPA
DPSKPITLASSRQPALDPKEEELFADSQPKNLHPPAKRRVPEWFGTSAATAGTITQTKKC
KTETRKGIFS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtagctgctggcctgcggggtaagtatccccagtggatgctcacagagagc
caggaggaatcttctttggggcacaaaaagaagtctggtgcccagaggagtgttctggag
gatgggctgccattcctggagttctgtggctctgttgtttatagctacgaagccagtgac
tgttctcttctctcagaagatatcaggcagagtttgtcagatggggctgctgttggcttt
gacatcgagtggccaccagcatacaccaaagggaggatggccaaaacagctgtaatccag
atgtgtgtcactgaggacaagtgttacttgtttcacgtctcctccatggcaggttttccc
aagggactcaaaaggctgctcgaagatgaaacaattaaaaaggttggcgtaggaattgag
ggagatcaatggaagctgatgagtgactttgaaatcaaactgaagagctttgtggagctg
gctgacgttgctaatgagaaactgaagtgcaaggagacgtggagtctaaatggcttggtg
aagcacctttttggcaggcagctgttgaaggatcagtctgtccgatgcagcaactgggag
cagtttccactcaacgaggagcagaagctctatgcagccacagatgcctatgctggctac
attgtttatgaaaaactgaaaaatatgagtaagagtgaccagaaattacttagtgtgagc
aaagatgccacatctgagggtgtgaaggagcgcttggcttccctggctgaagagctaaca
gacctggcttctcacatccctgactcttctggacaactggaaaacttccagagggctgca
gaaatactagcagagatatcagagaacatcagtgctttgaaaaccaccctgttgggctca
ggtttcccttctggactggagaggagctgtggtgcaaacagaacacattttgtagccaag
tcagcaaacgtccaagcacaaaatgcaaaatgtgctgagcaacctgaaggtgacctcaac
agctgctctgatgctacactggctgtcctctgggaggaagaaatgagtggagaggaggca
cagagaggtaacactgctctggaaaacggagctccagcagccagatttacagaagaagag
gacagggatgacttcaattccctggacattactgagcaagagcttcaggtcctggagcgt
caggctgcgaaggaattggtcagtgaagctgcacctgaggaggcatgttctacagacaat
gaacaaaatgtgtcctctgtcatagagagtgatgaagagctggaaatggaaatgctgaag
tctctaaaagatgtagatgattgtgaaggagttttacctaaaggagagtcgagtaaagcc
aggaaaactcctgacacagaagtggatgtagcaccagatggtgatgaagatgaaggcatt
gaggaagaggaggaggaatgtttggatccactgctaccagagcctggagaaagccacgtc
cagtgtctgaagacctattttgggcattcttcatttaaaccggtccagtggaaagtgatc
aattctcttttggaagacagaagagataatcttgttgtcatggcaactggctatggaaaa
agcttgtgctaccaatttcctcctgtttacactggacacacaggagttgtcatctgcccc
ctcatctccctgatggaggaccaggtgctgcagctgacaatgacagggattccagcttgc
ttccttagttctgctcagtcaaaacaggtcaaggattccatcagagggggtcagtacaga
gttatatacatgactccagagttctgttcagggaacttagagttacttcaggacctcaac
caaactgttggtatcaccctcatagctgtggacgaagctcactgcatctccgagtggggc
catgacttcaggagctccttcagaaatttaggcatgttaaagaaggttctgccattggtc
cccattattgctttgactgcaactgccagtccctcgatcagagaggacatagtgaaatgc
ctggacctgaggaatccccaggtcacctgtaccagttttgacagacctaacctgtacctg
gaagttggacagcgaagtggagacatttgtagggatttgaagcagttcctaattaggaaa
ggaagcagttctgtgtatgagtttgaaggccccactatcatctactgtcctacaagaaag
gccactgagcaggtggtgtgtgcactgaataaactcaacgtggcctgtggtacctaccat
gctggcatggggagcaagcagaggagagacactcactaccagttcatgagggatgaaatt
cagtgcgttgtggccacggtggccttcggcatgggcatcaataaggccgacatccggctg
gtgatccactacggtgcccccaaggagatggaatcctattaccaggaaatggggagagcc
gggcgcgacggccttcccgcggcctgccacgtcctctgggctgccacagacctagtctct
aacagacacctcctgggcgagatccgcaatgaggaattccggctgtacaagctgaagatg
ttggcaaagatggagaagtacctggtgtccaatgactgcaggaggaaaatcatcctgtct
cattttgaagacagacaactccgaaaggtttcctctggcatcatgggcacagaagaatgc
tgtgataattgcaggtccagcggctcctgccttgcagtccccagtgactttgagggcgga
ttgcaggactttgggaagcaagcacaccagctgctgtctgcagtgattgccctggatgag
aagtttgggaccagaatgccaattctgctccttcgagggtcttgctcccaacgcttgcca
gaccggtaccggaggcaccctctctttggctgcggaaaagagtggccagagaactggtgg
aaactgctctgccagcagctgatcatggaagggttcctcaaagaggtcgcaggccaagcc
aacaagtttgcaaccatttgtgtgctcacccagaagggtaggaattggctgtccaaagat
ggatctgcctcaaatccaagtcttctgttacagtccagtgaagaccttaatctgcagaga
ccttctgccagcagcaggcgttcgcctctgctctccaggcagcgctccccaggcacaaaa
ggaacagcacagtcaccaggcaagcagatatctctgtatgagatgttctcctgttacaga
aaaggtcaaactcctccaagaagcactaacatggttaacagtgtttcagggcgctcacca
ctgaaatctcctttgaagccccaaggaccaggtgttccatcccgagaaaaagaactagag
actgctctgtatggcaagctgctgactgctagacagaaggtagctaatgagaaggaaatt
cctccagctgtcttggcaaccaataagatcctggtggagatggcccggataaggcctacg
aacattgagaacttgaagaaaattgatggtgtgtctgaagccaaatccaccatgttgatg
cctctcctgtctgaaattaaggatttctgccaagcaaatggtttgcagaccgatgcattc
cccacatctgaatctaaggttcagaaagaagcatctccctcgaagtgtgctagagccctt
tctccttcagaggaggtcacgtatatcctgttccaagagaaaaattactctctgagggcc
ataagtgagagcagatctctgcccattgctgaggttggcactcacctgtgccaggccctg
gcagcgggccgcacggtgagcctggagcgagcgggtttgactcctgcagtgcagcacacc
attagggacgtgatccgcagccctcccattctctcagatactaccaaaattcaagaaatt
agaaaacttactcctgccaatattgagctgtatctgatcaagatggtgattgcactgttg
gagaaagagaatagaaataaatctcaggatggcttaggtttcaaaaggaggttggtgtgg
cctgaagggcagcagggaaaaacaggagcggatcaagcaagcagggaaggtgccttgtgg
aataaaaaacaggctgcaggcagtgtggatgccagccaggcagggagcaggggcccagca
gacccctcgaagcccatcaccctggcctcctccaggcagcctgccctcgatcccaaggag
gaggagctctttgcagactctcagcccaagaacttgcatcctcctgctaagaggagggtg
ccagagtggtttgggacctcggcagcgacagctggaactataacccagaccaagaaatgc
aaaacagaaaccagaaaagggattttcagttga
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integrated database retrieval system
