Lonchura striata (white-rumped munia): 110471239
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Entry
110471239 CDS
T05897
Symbol
PTPRD
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110471239 (PTPRD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsr01009
]
110471239 (PTPRD)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110471239 (PTPRD)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
110471239 (PTPRD)
Protein phosphatases and associated proteins [BR:
lsr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
110471239 (PTPRD)
Cell adhesion molecules [BR:
lsr04515
]
Immunoglobulin superfamily
Type II RPTP family
110471239 (PTPRD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
DSPc
V-set
PTPlike_phytase
Y_phosphatase3
Ig_C17orf99
PTP-NADK
Fn3_PTPRU
Kre9_KNH
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
110471239
NCBI-ProteinID:
XP_021387307
LinkDB
All DBs
Position
Z:54548661..55708577
Genome browser
AA seq
1924 aa
AA seq
DB search
MLVPNCRMMHVVRPVVVLLCLLLYADAETPPKFTRTPVDQTGVSGGVASFICQATGDPRP
KIVWNKKGKKVSNQRFEVVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNTVGEISVSTR
LTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNN
GRIKQLRSESIGGTPIRGALQIELSEESDQGKYECVATNSAGTRYSAPANLYVRELREVR
RVPPRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELN
DVRQSANYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVS
YYIIQHKPKNSEEPYKEIDGVATTRYSVAGLSPYSEYEFRVVAVNNIGRGPPSEPVSTRT
SEQAPSSAPRNVQARMLSSTTILVQWEEPEEPNGQIQGYRVYYTMDPTQHVNSWMKHNVA
DSHITTIGNLVPQKTYSVKVLAFTSVGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSI
LLSWTPPRSDTISSYELVYKDGEHGEEQRVSTEPTTSYRLQGLRPNSLYLFRLAARSPQG
LGASTAEISARTMQSKPSAPPQDISCTSPSSTSILVSWKPPPVEKQNGIITAYSIKYIGI
DGEDVKPHEILGISSDSTQYLLEQLEKWTEYRISVTAHTDVGPGPESLAVLIRTDEDVPS
GPPRKVEVEAVNSTAVRVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPMLKDIMLAD
AQWEYDDTAEHEMIISGLQPETTYSFTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVIS
HTQMNTALIQWHPPVETFGPLQGYRLKFGRKDMDTLTTMEFSEKEDHFTATDIHKGASYV
FRLSARNKVGFGEEMVKEISVPEEVPSGFPQNLHSESSTSTSVQLTWQMPLLAERNGIIT
KYTILYRDINVAYQPIELPVVPADTTMTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFR
TLPVDQAVFAKNFHVKAVMKTSVLLSWEIPENYNSALPFKILYDDGKMEVDGRATQKLIT
NLKPETSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPVFIGKTNLDGMITVELPEVPS
NENIKGYYIVIVPLKRSRGKFIKPWESPDEMELDELLKEIARKRRSIRLGREVELKPYIA
AHFEVLPTEFTLGDKKHYGGFENKQLQSGQEYVFFVLAVMEHSESTMYATSPYSDPVVSM
DLDPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKSSKPDRKRAESDSRKSSIPNSK
EVPSHHPTDPVELRRLNFQTPGMASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQ
QFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYINANYIDGYRKQNAYIAT
QGALPETFGDFWRMMWEQQGATVVMMTKLEERSRVKCDQYWPSRGTETYGLIQVTLLDTV
ELATYCVRTFALHKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGP
MVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDA
LLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPC
NKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDF
WRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFK
VTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGV
GRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFD
HYAT
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgccaaactgtcggatgatgcacgtagtcaggccagtggtggttcttctgtgc
ttgctgctctatgctgatgctgaaacaccaccaaagtttacaagaactcctgttgaccag
acaggggtttcaggaggagttgcctcattcatctgccaagccacaggagatccaagacct
aaaattgtctggaacaaaaaaggaaagaaagtcagcaatcagagatttgaggtagtaata
gagtttgatgatggatctggatcagttctcagaatacaaccactgcgcacaccccgagat
gaagctatttatgaatgtgtggcttccaacactgttggcgaaataagcgtgtccacaaga
ctaactgttttacgtgaggatcaaattcctcgaggttttccaaccattgatatgggccca
cagctgaaggtggttgaacgaactcgtacagctaccatgttatgtgcagccagtggcaat
cctgatcctgaaataacttggttcaaagatttcttacctgttgacacaagcaacaacaat
ggccgcatcaagcagctacgctcagaatctattggtggtacaccaataagaggtgccctc
caaattgaactgagtgaagaatctgaccaaggcaaatatgagtgtgttgcaaccaacagt
gcgggtacacgctattctgcccctgctaatctatatgtcagagagctgcgagaagttcga
cgggtcccaccaaggttctctatacccccaacaaatcatgagatcatgcctggcgggagt
gtaaatatcacctgtgttgcggtgggatcaccaatgccatatgtgaaatggatgcttgga
gcagaagatttgacacctgaagatgatatgccaatagggagaaacgtccttgagcttaat
gatgtcagacagtctgcaaactatacttgcgttgctatgtctacccttggtgttatagaa
gcaatagcacagataactgtcaaagccttacccaaacctcctggaacacctgtggtgaca
gaaagcacagcaactagcataacattgacttgggattctggaaaccctgagccagtttct
tactacataatccaacacaaacccaaaaactccgaggagccatataaagaaattgatggg
gtggccacaacacgttacagcgtggctggcctaagcccatattcagagtatgaatttcgg
gtagttgctgtaaataacattgggcgagggccacccagcgagcctgtgtcaacacggact
tcagaacaagcaccttcaagtgcaccacgcaatgtacaggcccgaatgctgagctccacc
accattctggtacagtgggaagaaccagaagaacctaatgggcaaatacaaggttacaga
gtttattacaccatggaccccactcaacacgtcaacagctggatgaagcacaatgtggct
gacagccatattaccactattgggaatcttgtaccccagaaaacatactctgtgaaggtt
cttgcttttacttctgttggggatggaccactttctagtgacattcaagtcatcactcaa
acaggagtgcctggtcaaccactgaacttcaaagcagaacctgagtctgaaacaagcata
ctgctttcctggacacctccacggtctgataccatttccagctatgaactggtttacaaa
gatggggagcatggggaggaacaacgtgtttccactgaacccacgacatcgtatcgtctg
caaggcttgaggccaaacagcctgtacttgttccgcctagctgcacggtctcctcaaggc
ctgggtgcctcaacagcagaaatctcagccagaaccatgcagtcaaagccatcagctcct
cctcaagacattagttgcacaagccccagctccactagcattttggtaagttggaaacct
ccaccggtggaaaaacagaatggcattatcactgcatactccatcaagtacattggaatt
gatggagaagatgtcaagccccatgaaattttgggaatttcctcggacagtacccagtac
cttttggaacagctggaaaagtggactgagtaccggatctctgtgactgctcacactgat
gttggacctggcccagagagcttagcagtattgattcggacagatgaagatgttcctagt
ggtcctcctcgcaaagtcgaggtggaggctgtcaactccactgctgttagagtgtcgtgg
cgctcgcctgtgcccaataagcagcacggccagatacgaggctaccaggtccactacgtc
cggatggagaacggggagccaaagggccagcccatgctaaaagacatcatgctggcagat
gcacagtgggaatatgatgatactgctgaacatgaaatgataatttctgggcttcagcct
gaaactacatactctttcactgtgacagcctatacaactaaaggtgacggagcacgcagc
aaacccaaacttgtatctactactggtgcagttccaggcaaacctcggcttgtgattagc
cacacacagatgaacacggcgctaattcagtggcatcctccagtggaaacttttggcccg
ctgcagggttatcgcctgaagtttggtcgcaaagacatggatacattaacgaccatggag
ttctcagagaaggaagatcacttcacagccacagacattcacaaaggagcttcttatgtc
ttcaggctctcagctagaaataaagtgggctttggggaggagatggttaaagagatttct
gttcctgaagaggtacccagtggatttccccaaaatctccactcggaaagctctacttct
acatcagttcaattaacttggcagatgccactcttggcagaaagaaatggcattatcacc
aaatacaccatcttgtacagagatatcaatgttgcttaccagccaattgaactccctgtt
gttcctgctgataccactatgacactttctggcttaaaaccagataccacttatgatgta
aaagtacgtgcccacacaagcaaagggcctggtccatatagtccaagtgtccagttcagg
acactacccgtggatcaagcagtgtttgcaaaaaattttcatgttaaagcagtaatgaag
acttctgttttgctgtcctgggaaattccagaaaactataattcggctttgcctttcaaa
atcctttatgatgatgggaaaatggaggttgatggacgtgctactcaaaagctgatcaca
aacttgaagccagagacatcatattcatttgtcctgacaaacagagggaatagtgctggt
ggccttcagcacagagtaaccgcaaagactgccccagacgtgcttcgcacaaagccagtc
ttcattggaaagaccaatttagatggcatgataactgtggaacttccagaagtaccctca
aatgagaatataaaaggctattacatagttattgtgcctttgaagaggtcccgtggaaag
tttatcaaaccatgggagagtccagatgaaatggaattagatgagctgcttaaggagata
gctaggaaacgcagaagcattcgtcttgggagagaagttgaattaaagccatatattgca
gctcactttgaagttcttcctacagaattcacattgggggataagaagcattatggtgga
tttgagaataagcaactgcagagtggtcaagaatacgtcttctttgtgttggctgtaatg
gagcactcagaatctaccatgtatgcaacaagcccatattcagatcctgttgtgtcaatg
gatcttgatccccagccaattacagatgaggaagaaggcttgatttgggttgttggacca
gtgcttgcagtggtgtttatcatctgtattgttattgctatacttctttataaaagcagt
aaacctgacaggaagagggcagaatctgattctagaaagagcagcatacccaacagcaag
gaggtcccctctcaccatcccacagatccagtggagctgcgacgccttaacttccaaact
ccgggtatggccagtcatcccccaatacctattttggaacttgcagatcacattgaaaga
ttgaaagcaaatgacaatttgaagttctcacaggagtatgagtctattgatcctggtcag
cagttcacatgggaacactctaacctggaagtaaacaaaccaaagaatagatatgcgaat
gtaattgcatatgaccattctcgtgttctactctcagcaatagaaggcataccaggcagc
gactatatcaatgccaattacatagatggatacaggaagcagaatgcatatatagcaacg
cagggggcactgccagaaacctttggtgacttctggagaatgatgtgggaacaacaaggt
gcaacagtcgtcatgatgacaaaactagaggagaggtccagggtgaagtgtgatcaatac
tggccaagcagaggcacagaaacatatggattaattcaagtgacccttttagatactgtt
gaattggcaacatactgtgttcgtacatttgcacttcacaagaacggctcaagtgagaaa
agggaagtgaggcaattccagttcactgcctggcctgaccatggtgtcccagaacaccca
acaccattcttagcttttctgcgacgagtcaagacttgcaacccacctgatgctggacct
atggttgtgcattgcagtgctggagtcggcaggactggctgtttcattgtgatagatgcc
atgttagagagaataaagcatgaaaagactgtagatatttatggccatgtaactctaatg
agagcacagaggaattacatggttcaaactgaggaccaatacatctttatccatgatgca
ctactggaagcagtgacatgtggaaataccgaagtgccagccagaaacctgtatgcatat
atccagaagctgacacagatagaaacaggcgagaatgtcacaggaatggaactggagttt
aagcgtcttgctagctctaaggctcacacttcaagattcatcagtgccaatcttccatgt
aataaattcaaaaatcgccttgtcaacattatgccatatgaatccacaagggtatgcttg
cagcctatccgaggagtagaaggctctgattatattaatgccagtttcattgatggatac
agacaacaaaaagcttacatagctacacagggtcctttagcagaaacaactgaagacttc
tggagaatgctctgggaacataactctacaattgtggtcatgctcactaaactacgagaa
atgggcagagaaaaatgccatcagtactggcctgcagagcgctcagccagatatcagtat
tttgtggtagatccaatggcagagtacaacatgccacagtatattctgagggaattcaag
gttacagatgcaagggatggtcagtcccgaacagtgaggcagttccagttcactgactgg
ccagaacaaggagtgccaaagtctggagaaggatttattgatttcataggccaagtacat
aaaacaaaagagcaatttggtcaggatggaccaatttctgttcattgcagtgcgggtgtt
ggaaggactggagtattcataaccctgagcattgtgttagaaagaatgagatatgaaggt
gttgtagacatcttccagactgtcaaaatgttaaggacacagcggccagccatggtacag
acagaggatcaataccagttctgctatcgagccgcactggagtatctgggcagctttgat
cactatgcaacataa
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