KEGG   Lonchura striata (white-rumped munia): 110471241
Entry
110471241         CDS       T05897                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
lsr  Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lsr03036]
    110471241 (KDM4C)
Enzymes [BR:lsr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     110471241 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     110471241 (KDM4C)
Chromosome and associated proteins [BR:lsr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110471241 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Tudor_5
Other DBs
NCBI-GeneID: 110471241
NCBI-ProteinID: XP_021387355
UniProt: A0A218VA13
LinkDB
Position
Z:complement(56110501..56356654)
AA seq 1071 aa
MAAVISDSPPNPSCKIMTFRPSMDEFREFNKYLAHMESQGAHRAGVAKVIPPKEWKPRKH
YDDIEDLVIPAPIQQMVTGQSGLFTQYSIQKKPMTVKEFKDLANSDKYRTPRYVDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEGIEEWNIAHLNTILDVVGEDCGIAIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAVPPEHGKRLERLAQGFFPSSSQECHAFL
RHKMTLISPSILKNHGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKAAKLCTCRRDMVSISMDVFVRKFQPERYRLWKQGKDFYTIDHTKPTPESTPEVNIWL
QRRRKKLNFHKSFQHTRSQSKKLKTPEDKRVSAMVADAKIIVTETATDGFKVSEEPEKKM
RAVNTGLASGEEENSSRMHLHQHLLDHVKVAGSIPSDSVLSPVPVLEKTKMEDEDRIDSS
HFSFSLEDSVASKTASDRCRKEDSLKSQNQYVSSIPYSKADKQTSEAENPDREESVSTED
GIGNLENSGSILEHGEVPIVKKGEEDRVEISCSEEAETKKISKSWHNPLHKPPARSPMTL
VKQQATGDEELPKTTLIEEKIQESEAWAKPLVYLWQTRPPNFNAEKEYNAACAKKEPHCA
ICTLLMPYYRSDNQDEESPTFNETNSAEILMAEDVKTKPLIPEMCFIYSEENTKNYPSNA
FVEEDGRSLLILCAKCCVRVHASCYGVPSHEIHNEWLCSRCRIEAWTAECCLCNLRGGAL
KQTTDKKWAHVICAIAIPEVRFGNVTERTPIDTSRIPLQRLKLKCIFCKQRVKKISGACI
QCSYGRCPASFHVTCAHAAGVLMEPNDWPCFVYITCFRHKINQNVRAKVCGKAIAVGQTV
ITKHRNTRYYSCKVIGVTSQVFYEVMFDDGSFSLNAFPEDIVSRDCLRLGPPAEGEAVQV
KWPDGKLYGAKYLGTNTADMYQLEFEDGSQIVMKREEIYTLDEELPKRVKARLSTASAMR
FEDTFYGADIILGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggctgctgttatctcagatagtcctccaaacccaagctgcaaaatcatgacttttcgg
ccttcgatggatgaattcagagaattcaacaaatacttagcacacatggaatcacaaggt
gctcatagggctggagttgcaaaggttatcccaccaaaggagtggaagccgagaaaacat
tatgatgatattgaagatttggtgattcctgctccaattcaacagatggtcactggccag
tctggacttttcacacaatacagtattcagaaaaaacccatgacagtgaaggagttcaag
gatctagccaacagtgacaaataccgcactccaagatatgtagactatgaagatctggag
cgtaaatactggaagaacttgacttttgtggcaccaatttatggagcagatatcaatggg
agcatttatgatgaaggtattgaggagtggaatattgcccatcttaatacaatattggat
gttgtaggagaagactgtggaattgcaattgagggtgtaaatacaccatatctttatttt
ggcatgtggaaaacaacatttgcatggcacactgaagacatggatctctacagtattaat
tatctccattttggggagccaaagtcatggtatgctgttcctccagagcatgggaaacgt
cttgaaagactagctcaagggttctttccgagcagctctcaagaatgtcatgcttttctt
cgccacaagatgactctgatttctccctcaatattgaaaaaccatggaattccttttgac
aaggttacccaagaggcaggagagtttatgatcactttcccatatggataccatgcaggg
tttaaccatggatttaattgtgcagagtcaaccaactttgccacagttcgatggattgat
tatggaaaagcagcaaaattgtgcacttgtaggagagacatggtgtcaatatccatggat
gtctttgtgagaaagtttcaaccagagagataccgtctgtggaaacagggcaaggatttt
tataccattgatcatacaaaaccaactcctgaatcaacacctgaagtgaacatctggcta
cagagaagaaggaaaaaactgaactttcacaagagcttccagcacaccagatctcaatct
aaaaagcttaaaactccagaggacaagagagtatctgctatggtagctgatgcaaaaatc
atagtgactgaaacagctactgatggcttcaaggtcagtgaagaaccagaaaaaaaaatg
agagcggtaaacacaggattagcttctggggaagaagaaaacagtagtagaatgcatctg
catcagcatttattggatcatgtcaaggttgcaggaagcatcccttctgactcagttttg
agccctgttcctgtactagagaaaacaaaaatggaagatgaggacaggatagattccagc
catttttccttttcacttgaagattctgtggccagcaagactgcttctgatagatgtaga
aaagaagacagtttgaaatctcagaatcaatatgtttcatccataccgtacagtaaagca
gacaaacaaacttctgaagcagaaaacccagatagagaggaaagtgtctcaacagaggat
ggtatcggcaacctagaaaattctggaagtattctggaacatggagaagtgcccattgta
aaaaagggtgaagaagacagagtggaaatatcttgttcagaggaagctgaaacaaagaaa
atatctaagagttggcataatccactacataaacccccagctagatctccaatgactttg
gttaaacagcaagcaactggtgatgaagaactgcctaagactaccttaattgaagagaaa
attcaagagtcagaggcatgggccaagccgctggtctacctgtggcagacaagaccaccc
aatttcaatgctgaaaaagaatacaatgcagcttgtgcaaaaaaggaacctcactgtgct
atttgcactcttctcatgccatactataggtcagacaatcaggatgaagaaagtcctact
ttcaatgaaacaaactcagcagaaatactgatggcagaagatgtgaagactaaaccgctt
attccggagatgtgttttatttatagtgaagaaaacaccaaaaactatccatcaaatgcc
tttgttgaagaagatggaagaagtcttctgattttatgtgcaaagtgttgtgtacgggtt
catgcaagttgctacggtgttccttctcatgaaatccataacgagtggttgtgttctcga
tgcagaatagaagcctggacagctgaatgttgtctctgcaacttgagaggtggtgcatta
aagcagactactgacaaaaagtgggcacatgtaatatgtgcaattgccatcccagaagtc
agatttggtaatgtcacagagcgtactccgatagacactagcagaatacccttgcaaaga
ttaaaattgaaatgtatcttctgcaagcagagagttaagaaaatctctggtgcctgcatt
cagtgttcatatggacgctgcccagcatctttccatgttacctgtgcccatgctgcagga
gtgctgatggaacctaatgactggccatgttttgtctacatcacatgtttcaggcacaag
atcaaccaaaatgtgagggctaaagtatgtgggaaggccattgctgttgggcagaccgtc
atcacaaaacatagaaatacacgatactatagttgcaaagtcataggagtgacatctcag
gttttctatgaagtcatgtttgatgatggctccttcagtctgaatgcttttcctgaagac
attgtaagcagagattgcctaaggctgggtccacctgcagagggagaggctgtccaagtg
aaatggcctgatggaaaactgtatggtgcaaagtatctgggaacaaatacagctgacatg
tatcagttggagtttgaagatggttctcaaatagtaatgaagagagaagaaatatataca
ctggatgaagagctccctaagagagtaaaagcacgtttatctacagcttctgccatgcga
tttgaagacacattttatggagctgatattatcttgggagagaagaaaaggcagagagta
ttgagttctcgctttaagaatgaatatgtggatgatccaggataccgcaccttcttaaaa
agctcattccaaaagaaatgccagaagggactgtaa

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