Lonchura striata (white-rumped munia): 110471245
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Entry
110471245 CDS
T05897
Symbol
RIC1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110471245 (RIC1)
Membrane trafficking [BR:
lsr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
110471245 (RIC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
ANAPC4_WD40
Beta-prop_EML_2
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
110471245
NCBI-ProteinID:
XP_021387370
LinkDB
All DBs
Position
Z:complement(56677870..56725314)
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AA seq
1423 aa
AA seq
DB search
MYFLSGWPKRLSCPLESLERPLHIQTDPQRAFFAVLFPSQLSIWYCRPSVLIVSYKEFTK
AASQFGPYKQAEWRPDSTMIAVSTANGYILFFEIPSARDKYLYEPIYPKGSPHLKGTPHY
KEEQCAPSLNLEMKKVLDLQASITSLQSMLEDLLVATADGFLHLIHWDGMTNGRKAINLC
TVPFSVDLQSSRAGSLLGFEDVYIRDMEYCATLDGFAVVFNDGRVGFITPMSSRFTAEQL
HGVWAQDVVDGTCVAVNNKYRLMAFGCANGSVQVYTIDTTTGAMQFSHKLELTPKQYPDI
WNKTGPVKLIRWSPDSCVVMVTWECGGLSLWSVFGAQLICTLGGDFAYQSDGAKKDPLKI
CSMTWGSEGYHLWVIDGNSSSNMKSERNSNNEAQSFGILQFQFIKSALTVNPCMSNQEQV
LLQGEDRLYLNCGDAAQTQSPRNTLAHSEHSHSRERGPFSGGSLDSQGLSTLLGHRHWHV
VQIHSTYLESNWPIRFSAIDKLGQNVAVVGKFGFAHYSLLTKKWKLFGNITQEQTMMVTG
GLAWWNDFIVLACYNLNDHQEELRIYLRTSNLDNAFAHITKVQANTLLLSVFRDIVILFR
ADCSICLYSIERRSEGLNPTASIQILQEVSMSRYIPHPFLVVSVTLTSVRTETGITLKMP
QQACEAESIMLNLAGQLIMLQRDRSGPQIRDKDNNPNQRKHLPFCAPVVLAQSVENVWTT
CRINKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSRRIMLPFHINIYPLAVLF
EDALVLGAVNDTVLYDCLYTQTSAREHLEVLFPFSIVERTSQIYLHHILRQLLVRNLGEQ
ALLLAHSCATLPYFPHVLELMLHEVLEEEATSREPIPDPLLPTVAKFITEFPLFLQTVVH
CARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQHATLLF
NTALEQGKWDLCRHMIRFLKAIGSGETETPPATPTTQEPSSSGGFEFFRHRSISLSQSAE
NLHSKFNLTKTLSMPSGPSVKRWSKDSDCAENMYIDMMLWRHARRLLEEIKLKDLGCFAA
QLGFELIGWLCKERARAARVEDFVCALKKLHNDFLWPFPVIPASSINSPFKNGKCKTAVG
EQLLKSQSADTFVNMEMDTGISTTPRSRSWLGTISSSQREMDTVSSHGPHMQDAFLSPLL
SKVFLIGDECSIGSATDLTETSSMVDGDWTIVDENFSSLSLTQSELEQLSLELASKGPHK
SQVQLRYLLHIFMEAGCLDWCVVIGLILRESSVINQVFSIMQSSDIDGEICQNIKTGLDA
VDKWASTDCPGYKPFLSIIKPQIQKLNEIVEEQVQPEAFQPVNPSKVPEQANPRAEENRT
SSSHGTNPQSDAGSSNASRHEEDKAKTEDEDSFQEGSYDCVVS
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcctcagcggctggcccaagaggctctcgtgtcctctggagtccctggagcga
ccgcttcacatccagacggatccccagagagctttcttcgcagttttgttcccatctcag
ctaagcatctggtactgcagaccaagtgtcttaatcgtaagctacaaggaatttacaaaa
gcagcttctcagtttggaccttataaacaagcagaatggcggcctgacagcacaatgata
gctgtttcgactgcaaatggatacatcttattttttgaaatcccatcagcaagagacaag
tatctttatgagccaatatatcccaaaggaagccctcatctgaagggaaccccacattat
aaggaagaacaatgtgctccttcattaaatctagaaatgaagaaagtgctggacttgcaa
gcctctatcacaagtttgcagtccatgttagaagatctacttgtggctactgctgatgga
tttctccatctcattcactgggatggtatgaccaatgggaggaaggccatcaacttgtgt
acagttcccttttctgtagatctgcagtcttctcgagcaggttcacttttgggatttgaa
gatgtttacatcagagatatggaatactgtgccacacttgatggctttgctgttgttttt
aatgatggcagagttggtttcattacaccaatgtcaagtagattcactgctgagcagctc
catggtgtttgggcgcaagatgtagttgatggaacttgtgtggcagtgaataacaaatac
aggctaatggcgtttggatgtgccaatggctctgtgcaggtttatacaatagataccacc
actggcgccatgcagttttctcataaattggaactgacacccaaacaatatcctgatatt
tggaacaaaacaggacctgttaaactaatcagatggtcacctgatagctgtgttgtgatg
gtgacctgggagtgtggaggtttgtccttatggagtgtttttggtgctcagcttatctgt
actttaggaggtgattttgcgtatcaatctgatggtgccaaaaaggaccctctaaaaatc
tgttccatgacctggggatccgaagggtatcatctttgggttattgatgggaattcatct
tcaaacatgaaatctgaaagaaattcaaataatgaagctcagtcgtttggtattctgcag
tttcagttcatcaagagtgcactcactgttaatccttgtatgagtaaccaggagcaagtc
ctccttcaaggagaagatcgcttatatttgaactgtggagatgcagcacagactcagagt
cccagaaatactttggcgcactctgaacatagccacagcagggaaagaggcccattttca
ggtggcagtctagattctcagggtttaagcactttactaggacaccggcattggcatgtt
gtacagattcatagtacatatctagagagcaactggcctataaggttttcagctattgac
aagcttggacagaatgtagctgttgttggcaagtttggttttgcacattattctttactc
accaaaaaatggaagctgtttggaaacattacccaggagcaaactatgatggtaacaggt
ggcttagcatggtggaatgacttcattgttcttgcatgttataatttaaatgatcaccag
gaagagctgagaatctacctgcgcacgtctaaccttgacaatgcgtttgctcacatcacc
aaagtgcaagcaaatacgttactactgagtgtcttccgggacattgtgatattgttcaga
gcagattgttccatttgcctttacagtattgagagaaggtctgagggtcttaatcctact
gccagtatccaaattcttcaagaagtgtccatgtctcggtatattccccatccttttctt
gtagtgtctgttacattgacatcagtgagaacagagactggcatcaccttgaagatgcca
cagcaggcttgtgaagctgaaagtataatgcttaacttagcaggacaacttatcatgttg
caaagggatcgatctggaccccagatacgagataaagacaataatcctaatcaaagaaag
catctgcctttttgtgctccagttgtcctagcccagtctgttgaaaatgtatggactact
tgcagaattaacaaacagaaacgccacttactggaggctctgtggctcagctgtggtggg
gcaggtatgaaagtctggcttcccctgtttcccagagatcatcgaaaaccgcattccttt
ctgtcaagacggatcatgctgcctttccacatcaacatatacccactggctgttttgttt
gaagatgccttggttcttggtgctgttaatgacactgtgctctatgactgtttatacact
caaaccagtgctagagaacacttagaggttctctttcctttctccattgttgagagaacc
tctcagatctacctccatcacattttacgccagctcttggttaggaacctcggtgaacag
gccttgcttttggcccactcctgtgccacattaccatactttcctcatgtactagaactg
atgcttcatgaagtgctggaagaagaagctacctcgcgggaacccattcccgaccctctc
ctacccactgtggcgaagttcattacagaattccccctcttcctgcagacagttgttcat
tgtgctaggaagacagaatatgccctgtggaattacctttttgctgctgttggaaaccca
aaggacttgtttgaagagtgcttaatggcccaggacttggacacagctgcctcttacctt
attatcctacagaatatggaagttccagcagttagcagacaacatgctactctcctattt
aatactgccttagagcagggaaagtgggatctctgtcgtcatatgattagatttcttaaa
gccattggctctggagaaacagaaacacccccagctacaccaacaactcaggaacctagt
tcaagtggtggttttgaattcttcaggcatcgcagcattagtttatcccaatcagcagag
aatctccatagcaaatttaatctgacaaaaacactgagtatgccctctggcccatctgta
aaaaggtggagtaaagacagtgactgtgctgagaacatgtacattgacatgatgctctgg
cggcatgcgcggcgtctgctggaggaaatcaagctgaaagaccttggctgctttgctgca
cagctgggctttgagctgatcggctggttgtgcaaggagcgagccagagctgcccgtgtg
gaggattttgtgtgtgctttgaaaaagctacacaacgatttcctctggccatttccggtt
ataccagcttcatccattaattcacctttcaagaatggaaagtgcaagacagctgtgggg
gagcaactactaaaatctcagtctgcagacacctttgtaaacatggaaatggacacaggg
atttcaaccacacctcgcagtcgcagctggcttggtactatcagctcctctcagagagag
atggacactgtttcatcccatggaccacacatgcaagatgcattcctttctcctttgcta
agtaaagtgtttttgataggtgatgaatgcagcattggttcagcaacggacctgactgaa
acaagttctatggtggatggagactggaccatagtggatgaaaacttctccagtctaagt
ttaactcagtcagagcttgagcagctctctctagagctggccagtaaagggccacacaag
tcacaggtgcagctgcggtacttgctacatatcttcatggaagcaggatgtctggattgg
tgtgttgtcataggccttattctcagagaatcttcagttatcaaccaggttttcagtatc
atgcagtcctctgatattgatggagaaatctgtcagaatatcaagactggcctagatgct
gttgacaagtgggcttctacggattgccctgggtacaagccatttctaagtatcatcaaa
ccacagatccagaaactaaatgaaatagtagaagagcaagtacaaccagaagcgtttcag
ccagtgaatccttctaaggttcctgaacaagcaaacccaagagctgaggaaaacaggact
tcatctagccatggcactaatcctcagagtgatgctggcagcagcaatgcaagcagacat
gaagaggacaaggctaagacagaggatgaggattcattccaagaaggcagttatgactgt
gttgtgtcttaa
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integrated database retrieval system
