Lonchura striata (white-rumped munia): 110471259
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Entry
110471259 CDS
T05897
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110471259 (VLDLR)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110471259 (VLDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
110471259
NCBI-ProteinID:
XP_021387404
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All DBs
Position
Z:complement(57585800..57610783)
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AA seq
932 aa
AA seq
DB search
MSPAAASAPRLSARSACLPAHPVPGAAMRLDREPGDPSASAARRGAERRGAPRCWALLLL
LALGCLRAAADGARAKCEESQFACGNGRCIPQIWKCDGDEDCLDGSDESACVKKTCAESD
FVCLSGQCVPNRWQCDGDPDCEDGSDESSELCHTRTCRVNEISCGPQSTQCIPVSWKCDG
EKDCDSEEDEQNCGNVTCSPADFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVH
EFQCKTSTCIPLSWVCDDDADCSDHSDESLEQCGRQPAPSVKCSASEVQCGSGECIHKKW
RCDGDPDCKDGSDEINCPSRTCRPDQFRCEDGNCIHGSRQCNGVRDCLDGTDEANCNNVI
QCSGPGKFKCRSGECIDINKVCNQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDLVI
GYECDCPAGFELLDRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKA
VGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNSIALDADIAEQKLYWADFSQKAIFSA
SIDTRDKVGTHIRILDNIHSPAGIAVDWVYKNIYWSDSTAKTISVASLDGTKRKVLFLSE
LREPASIAVDPISGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRL
YWLDSKLHMLSSVDLNGQDRRIVLKSHMFLPHPLALTIFEDRVYWIDGENEAVYGANKFT
GNDLVTLVNNLNDAQDIIVYHELVQPSGRNWCEEHMANGGCSYLCLPAPQINEHSPKYTC
ACPAGYFLQEDGLRCTVSGTGTTVAYTEAKDTSTTEKSPTVGLVPGGFNTSGTTSEVTAA
GRTSAAWIILPAVLLMMAAAAGYFMWRNWQHKNMKSMNFDNPVYLKTTEEDLTIDIGRHS
GSVGHTYPAVSTPINLLCLRLHVNNWSRRTAR
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggctgccgcctctgctcctcggctctccgcccgcagcgcctgcctgcccgcg
caccctgtccccggcgcggcgatgcggctggaccgggagcccggagacccgagcgcctcg
gccgccaggcgcggcgcggagcggcggggggctccgcgctgctgggcgctgctgctgctg
ctcgcccttggctgcctgcgcgccgccgccgacggtgcgagagcaaaatgtgaagaatcc
cagtttgcatgtggtaatggacgctgtattcctcaaatctggaaatgtgatggtgatgaa
gactgtttagatggcagtgatgagagtgcttgtgtgaagaaaacatgtgccgaatctgac
tttgtgtgcctcagtggtcaatgtgtgcctaacagatggcagtgtgatggggatccggac
tgtgaggatgggtctgatgagagttctgaactgtgccacacgagaacatgccgggtaaat
gaaatcagctgtggtcctcagtcaactcagtgtatcccagtgtcctggaaatgtgatggt
gaaaaagactgtgacagtgaagaagatgaacagaattgtggcaatgtgacttgtagtcca
gcagacttcacatgcagcagtgggcaatgtatttccaagagctttgtctgcaatggtcaa
gatgactgcagcgatggtagcgatgagctggagtgtgcccctcctacctgtggcgttcat
gagttccagtgcaagacctcaacttgcattcccctcagctgggtgtgtgatgatgatgct
gactgctctgaccactcagatgagtctctagagcaatgtggccgccagcctgcgccttct
gtgaagtgctctgccagtgaggtgcagtgtggctcaggtgaatgtatccataaaaagtgg
cgctgtgatggagatcctgactgcaaggatggaagtgatgaaatcaactgcccttctcgg
acctgcagaccagaccagttcagatgtgaagatgggaactgcatccatgggagtaggcag
tgcaatggtgtgagagattgtctggatggcacagatgaagcaaattgtaacaatgttatt
cagtgctctggacccggcaaattcaagtgcagaagtggagaatgcatagatatcaataaa
gtgtgtaaccagcagagagactgcaaggactggagtgatgagcccctcaaggagtgtaac
atcaatgaatgtctcgtgaacaatggtggatgctctcatatctgcagagatcttgttatt
ggctatgaatgtgactgtccagctgggtttgagcttctggacaggagaacctgtggtgat
attgatgaatgtcagaaccctggtatatgtagtcagatctgtatcaacctgaaagggggc
tacaaatgtgaatgtagccgtggctatcagatggatcttgctactggggtgtgcaaggca
gttgggaaagaaccaagtctaattttcaccaaccgccgggacataaggaagattggcctt
gagagaaaagaatacatacagcttgtagagcagctaagaaactctatagctctagatgct
gatattgctgagcaaaaactttactgggcagacttcagccaaaaagcaatcttcagtgcc
tctattgatacccgtgataaagttggaacacacatcagaatcctggacaacatacacagc
cctgcaggaattgctgttgactgggtttataagaacatctactggtcggactcaactgca
aagaccatttcagtggctagcctagatggcacaaaaagaaaggttttgtttctctctgag
ctgagagagccagcttctattgctgtagatcctatctctggctttatgtactggtcagac
tggggtgagccagcaaaaattgaaaaagcaggaatgaatggatttgacagacagcagctt
gtgacaacagaaatccaatggcctaatggaattgctctagatcttgtaaaaagccgcttg
tactggcttgattctaaactacacatgctgtcaagtgtggacttgaatggccaggatcgt
agaattgtgctgaagtcacatatgttccttcctcatcctcttgctctaaccatttttgaa
gaccgtgtgtactggattgatggagagaatgaggcagtctatggggccaacaaatttact
ggaaacgatttggttacactagtgaacaacctcaatgatgcacaggacatcattgtgtat
catgaacttgttcagccttcaggtaggaactggtgtgaagagcacatggcaaatggaggc
tgtagctacctatgcctgcctgctcctcagataaatgaacattctccaaagtacacctgt
gcatgtcctgctgggtacttcttgcaggaggatggtctgagatgtacagtttcaggtact
ggaacaactgtggcttacactgaggctaaagataccagcacaacagaaaaatctccaact
gttggactagttcctggaggattcaacactagtggtacaacctctgaagtaactgcagct
ggaagaacatcagcagcttggatcattcttcctgctgtattgttgatgatggctgcagca
gctggctacttcatgtggcgtaactggcagcacaagaacatgaaaagtatgaattttgat
aatccagtttacctaaaaaccacagaagaggacctcacaattgatattggaagacacagt
ggttcagtaggacacacctaccctgcagtaagtacacctattaacctattatgtctgaga
ctccatgttaataattggagtagaaggactgccagatga
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