Lonchura striata (white-rumped munia): 110471325
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Entry
110471325 CDS
T05897
Name
(RefSeq) protocadherin-10
KO
K16499
protocadherin delta 2
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110471325
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Protocadherins
110471325
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_tail
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110471325
NCBI-ProteinID:
XP_021387563
LinkDB
All DBs
Position
13:complement(2654828..2659555)
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AA seq
960 aa
AA seq
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MGAGTRSGRGQLFLRSLLFLLLAGSPARHPVRGQLRYAVPEELEHGAFVANLGEDLGLDV
STLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGTCLLHLQLLVESPLE
LYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPN
GFFSLEVQTRSDASKFAELVLERALDREQQRVHRVLLTALDGGVPERSGTAHILITVLDA
NDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRELFHV
EPRSGQVLLKGRLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSV
STPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPNVPFELRSSFRNYYTLVTTQALDR
ELVPEYNVSITARDMGSPALLTRSTLTIPVSDVNDNAPRFLQPSYSVYVMENNAPGASIC
SVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQV
QAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSARPGYLVGTVSA
VDADAGLNSRLSYQLLQATDFTLFSVAPDTGELRTLRSFLEQDASRQQLVVQVRDGGQPA
LSATMSLLLSVVETMPQTLSDFSEFSLPPEVSSSSPLTLYLLVSLGSISFTFLLAILILT
AIRCRGERRSRQGDSCPPPRCRCCPGSRPSSDGLKTSNLTAQPPAGTTAATCLDVPAGGP
PGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSRPDQHLQVSKEAKQPNTDWLPP
NTQRPALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGPNSIWTPQYSPLYP
ALDYQHNVYIPGTPTLLSSKDGPLFPGRENKNSFSTFGKRKKMTTYCDMHDSVVINNDLK
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgggacacgatccgggcgggggcagctcttcctccgctccctcctcttcctc
ctgttggccgggtccccggcgcgccacccggtgcgggggcagctgcgctacgccgtgccg
gaggagctggagcacggagccttcgtggccaacctgggtgaggacctgggactggatgtg
tccaccctgtcggcgcggaggttccgcatcgtgtcacgggccggggccaggcagcacctg
gaggtgaacctggagaacgggatcctctttgtgaacgagcggattgaccgggaggaggtg
tgcgaggccggggggacctgcctgcttcacctgcagctcctcgtcgagagcccactggag
ctctaccgcgttgaggtggaggtgctggatatcaacgaccatgcacccaccttcccttgg
caggaatatgtgctggaagtggccgagtctgctgtgctcggtgctcgcttcccactggag
agcgcccaggatcctgacgtgggcaccaactctgtgcacacctaccgcctcagccccaat
ggcttcttttcactcgaggtgcagacacgcagtgatgccagcaagtttgcagagctggtg
ctggagcgtgccctcgaccgtgagcagcagcgtgtgcaccgggtgctgctcaccgctctc
gatggcggcgtccccgaacgctcaggcacggcgcacatcctcatcacggtgctggacgcc
aacgacaacgtgcctgcctttgaccagccctcctacggtgtgagccttcctgaggacgct
cctgctggcaccctggtcatccagctcaatgccactgacctggatgagggccccaacggg
gagattgagtactccttcagtgggcacgcaccgccgcgcgtccgggagctcttccacgtg
gagccccggagcgggcaggtgctgctgaagggccgcctggactacgagcgggccagcctc
cacgagctctatgtgcaagccaaggaccgcggaccctcggctgtggccgtgcactgcagg
gtgcttgtgcacctccttgatgtcaatgacaatgcgccagaggtgaccctcacctctgtg
tccacacccgtgctggaggatgcccccccaggcactgtgatcgctgtcatcagtgttctg
gaccgggactctggggacaacgggcgtgtgagctgtgaggtcggccccaacgtgccattc
gagctccgctcctccttccggaactactacacgctggtcaccacgcaagcgctggaccgg
gagcttgtgcccgagtacaacgtaagcatcacggctcgagacatgggctcgcctgccctg
ctgacccgcagcaccctcaccatccccgtgtccgacgtgaacgacaacgctccgcgcttc
ctccagccctcctacagcgtctatgtgatggagaacaacgcaccaggtgcctccatctgc
tctgtcagtgcattagaccccgactgccaacaaaatgcctacctgtcctactccattgcc
gacgggcacatccatggcatgcctgtgggcacctacgtgtccatcaactcagacagcggg
cacatgtacgccctgcgctccctcgactacgagcagatccgcagcttccagatccaggtg
caagcacaggacgcggggtttcccccactcagtgccaacgtcaccgtccacatctttgtg
ctggaccagaatgacaatgctccggtcatcgtttcccccatgccgcgcaacggctccgtc
gccacggagctggtgccgcgatcagccaggcctggctacctcgtgggcacggtgtcggcg
gtggatgcggatgcggggctgaactctcgcctctcctaccagctcctccaggctactgac
ttcacccttttcagcgtggcacccgacacgggtgagctgcgcactctccgctcctttctg
gagcaggatgcgagccggcagcagctggtggtgcaggtgcgggacggagggcagccagcc
ctctctgccaccatgtccctcctgctttcggtggtggaaaccatgccccagactctctct
gacttcagcgagttcagcctccctccagaggtctcctcatcttccccgctcaccctctat
ctccttgtctccctgggctccatctccttcaccttccttctcgccatcctcatcctcaca
gccattcgctgccgtggagagcggcgttcccgccaaggggacagctgcccgccacctcgc
tgccgctgctgtcccggctccagaccctcctctgatggcctgaagacttccaacctgacg
gcacagccccctgcagggaccacggctgccacctgccttgatgtgcctgcgggcggcccc
ccaggctactgctacaaggtctgccttggtcctgagtctgctcagagcgacttcatgttc
ctcaaaccctgcagccccccccggaacaacgagaaggatcccgggaagcggtcccggcca
gaccagcatctccaggtctccaaagaggccaagcagcccaacacagactggctgcctcca
aacacacagagacctgccctgaaaagctcccagagcctggaagatgtgggggaaatccgt
agagccctccagaaggagcacgagaggctgtgcacactggtgacccctgtctctgagttt
cagaaggcttcagcaggacccaacagcatctggacaccccagtacagccccttgtaccca
gccctggattatcagcacaacgtttacatccctggcacccccactctgctttccagcaag
gatgggcccctcttcccaggccgggagaacaaaaacagcttctccacctttggcaagagg
aagaagatgacaacttactgtgacatgcacgacagtgtggttatcaacaatgacctgaaa
tag
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