Lonchura striata (white-rumped munia): 110471350
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Entry
110471350 CDS
T05897
Name
(RefSeq) protocadherin beta-2-like
KO
K16494
protocadherin beta
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lsr04515
]
110471350
Cell adhesion molecules [BR:
lsr04515
]
Cadherins
Protocadherins
110471350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
110471350
NCBI-ProteinID:
XP_021387590
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Position
13:complement(2452012..2454637)
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AA seq
702 aa
AA seq
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MKPRKSKEPLMGRAAALILVLCVSGITAETARYSVPEEAGRGSFVANIAKDLGLTSEELL
ARQARVVPEGEKQYLQLNQHTGDLVVREQMDREEMCGQSEPCLVRFEVLLESPLQSFRAE
VRLTDINDHAPAFLNKEIVLKIPESAMPGTRVLLESAHDPDVGNNSLQHYSISSNEYFHV
YTQRRSDGGRYAELVLDRALDREQQAEVAFIITAVDGGNPPRSGTALIRVIVLDTNDNIP
VFTQTLYKVSVMENSSQDTIVMVVSASDLDAGTNGEIVYSIFQNSEENLQTFKINPETGQ
IRLKKTLDYEEKKTYEIDVQATDGGGLSTHCKVEVQVKDVNDNAPEVIITSLTSTLSEAA
PPNTVVALFNVRDPDSGDNGRTTCELTGEQPFRITLLAADAYALVTSETLDREQVEEYNV
TVRARDEGSPTLSASKTLFVRLLDVNDNAPTFTQAIYTMVISENEPAGRSLGHLSATDPD
AGENAHVRYSLVPPPPGTLAAASFVSVDAESGTVRKRDAPRQRLIVLVRDRGHPSRSATA
TLAVALVDDFSDAFHQLGHDPASRQQPQIAEEEMLTTYLITSLCCVSSLFLLSVLVLTAN
TLCKARVRAELPPPSPSCYADGDFASDGVGAGSTGTLSPAYRYEMCLTSGSGRSEFRFLR
PILPSLHSNAEAGQDKDEELLRHSQPPCDREAQTRSKATPPF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgaggaagagcaaggaacctctcatggggagagcggcggctctgatccttgtc
ctctgcgtctcggggataacagcagaaaccgctcggtactctgtgcccgaggaggcgggg
agaggctcttttgtggcgaatatcgctaaggatttgggactaaccagtgaggaattattg
gcccgtcaagctcgagtcgttcctgaaggagaaaaacagtatttacagctgaaccagcac
accggggatttggtggtgagagagcagatggaccgggaagagatgtgtggacagagcgag
ccctgcttggtgcgttttgaggtgctgctggagagcccactgcagtccttccgagctgag
gtaagactcaccgatataaacgatcatgctcctgcgttcctaaataaagaaattgtttta
aagatcccggaatctgcaatgccagggactcgggttttgttggaaagcgctcacgatcca
gacgtggggaacaatagccttcagcattatagtatcagctcgaacgaatatttccatgtg
tacacccagcggcggagtgacggcgggaggtacgccgagctggtgttggatcgagccctg
gaccgggagcagcaggcagaagttgctttcatcatcacggctgtggatggtgggaatcca
ccacggtctggcacagctttaatccgcgtcatagtcctggatacaaacgacaacatcccg
gtatttactcagactctgtataaagtctctgtaatggaaaatagctcacaggacaccata
gtgatggtagtgtctgctagcgatttagacgcaggaacgaatggggaaatagtgtattcc
atatttcaaaattcagaagaaaatctccaaacgtttaaaataaacccagagacaggtcag
attcgtctcaaaaagaccttggactatgaagaaaaaaagacatacgagatagacgtccaa
gccacagatggagggggcctctccacgcattgcaaggtggaggtgcaggtgaaggacgtg
aatgataatgcccccgaggtgatcatcacctcgctcaccagcactctctcggaagccgcc
cctcccaacaccgtggtggccctcttcaacgtgcgggacccagactcgggggacaatggc
aggacgacctgcgagctgacaggagagcagcccttcaggatcacgctgctggcagccgac
gcgtacgcgctggtgacatcagagacgctggaccgggagcaggtggaggaatacaacgtg
acggtgcgagctcgagacgagggctcccccaccctctcggcatccaagaccctgttcgtg
cggctcttggatgtgaacgacaatgcacccaccttcacccaggccatttacaccatggtg
attagcgaaaacgagcccgcgggtaggagcctgggccacctcagtgccacggacccggat
gcgggagagaatgcccacgtaagatactcgctagtgccgccgccaccaggcaccctcgcc
gcagcatcattcgtgtcagtggacgcggagagtggaaccgtccggaagagggacgcgccc
cggcagaggctcatcgtgctggtgcgggatcgcgggcatccgtcgcgctctgccactgcc
accctcgctgtggcactggtggacgatttctccgatgcctttcaccagcttggccacgat
cctgcgagccgacagcagccacagatagccgaagaggaaatgctcaccacttacctcatc
acctccctgtgctgcgtctcgtcccttttcctcttgtccgtcctcgtcttgacggcgaac
acgctctgcaaagctcgtgtccgggcagagcttcctcctccctctcccagctgctatgcg
gatggagatttcgccagcgacggcgtgggcgcgggaagcacgggtactctgtcgccggct
taccgctacgaaatgtgtctgaccagcggctcggggaggagcgaattccggttcctgagg
cccatcctgcccagccttcatagcaatgctgaggcgggacaggacaaggacgaggagctg
ctacgccactcgcagcctccttgcgacagggaagcccaaacgaggagcaaagccactcct
cctttttag
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