Lonchura striata domestica (Bengalese finch): 110471380
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Entry
110471380 CDS
T05897
Symbol
RIN3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110471380 (RIN3)
Membrane trafficking [BR:
lsr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110471380 (RIN3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RA
SH2
Motif
Other DBs
NCBI-GeneID:
110471380
NCBI-ProteinID:
XP_021387635
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Position
5:complement(15828791..15880543)
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AA seq
970 aa
AA seq
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MDWLMRLCLPGTPLLCFSPVGDTSEEGKETHLCQASAVRNCLQLPGISILDKLIKTCPVW
LQLNMSQETAGAILGKETAGIFLVRKEGNVSNMVLAVRLPVQNEAPGVLEYNIKEEKSIL
YLEGSVLVFEDVFKLVAFYCVSRDLLPFTLKLPQAILEASSFQDLEIISSLGIDFWDSYL
NHRRQDLSHPAKDYAFSTAQADSLRPTQCFASSTNHCSCEIELSIGNDRLWFVNPIFIEE
CSNPCPPDIPSPKGHSGSTELPPATMITERRSPRRPPPPPPSHSLIQKSSLKLSQDPMTV
CEENKLLIKPLGKSFEEMKIEGSADKEERKQSCSANAPSAVSPRKGSQPSVPPRRRLSER
TSEESCVGNPENCETLKGEGTEENQDTSAEGRDKTLLCENAVEMPGEVPKRAVSQFQETK
PEPAEKKEDMPKTQSNATEKGKSPPIPPPRRKRVSQVPSIPSSCQPKQRTAAETAVATGQ
AVCKGSPATVTCGATWAHSKPEQGHGHKSVSSAELEGSRLSLEDLGGSTMAQASTSEPDS
YSTSSTEDDLEMLSGSSGKKTRSVILAKAKNRLSLVNLSNVFTVFLSSDRKLQKKIVELA
QDKESYFGNLVRDYRVYSLEMMAKQSSSTEMLQEIRLMMTQLKSYLVQSTELKSLIDPAS
YTEEQLEVIAETALYKCVLKPLKEAINSSLKEIHNKDGSLQQLKENQLVIQNTTTTDLGV
TTSVPETAVLEKILHKFTTMHKTYSPEKKIAILLKTCKLIYDSMAQGNPGKPYGADDFLP
VLMYVLARSNLTEVLLNVEYMMELMDPALQLGEGSYYLTTTYGVLEHIKNYDKITVTRQL
SVEVQDSIHRWERRRTLNKARASRSSVQDFICISFLEVSGQSRTLASRRDTTAEQLSQQC
AEKFEVSHPKDYGLFVYVDDQWLQLDKDALPHHIKASLLKSETKKDFNFIYKPIDHKTPP
IPIVKESDFS
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggactggcttatgagactctgcttaccagggactcccttgctgtgtttcagccccgtt
ggagataccagtgaagaggggaaagagacacatctctgccaggccagtgctgtgcgaaat
tgcctccagcttccagggatcagcatccttgacaaactcatcaagacgtgtcctgtctgg
cttcagctgaacatgagccaggaaacggctggggcgatccttggcaaagaaacagcaggg
atattcttagttaggaaagagggcaatgtgagcaacatggtccttgcagtccgcctgcca
gtgcagaacgaggctcctggtgtgctggagtacaacattaaagaagaaaaatcaatcctg
tacctggaaggatctgtccttgtatttgaagatgttttcaaattggtcgccttctactgt
gtcagcagggatttgctgccctttaccctgaagctgccacaagcaatattagaagccagt
agctttcaagaccttgaaattatttctagtctggggatagatttctgggattcctattta
aaccatagaagacaggacttatcccaccctgcaaaagactatgctttcagcactgctcag
gcagacagtttaagaccaacccagtgttttgcaagtagcacaaaccactgctcatgtgaa
attgagctgtcaataggaaatgacaggctgtggtttgtgaatcctatttttatagaagag
tgcagtaatccttgccctccagatataccttctcctaaaggccactctgggagcactgaa
ctccctcctgccaccatgattactgaaaggaggtctcctcgacggcctcctccccctcca
ccttctcattctctcattcagaaatcttccctgaagctctcacaggaccccatgactgtc
tgtgaagaaaacaagcttcttattaagccactaggaaagagcttcgaggaaatgaaaatc
gaaggcagtgccgataaagaagaaaggaagcagagctgctcggccaacgcgccctcggca
gtgagccccaggaagggctcccagccctcggttcccccgcggaggcggctgagtgagaga
acctcagaggagagctgtgtgggcaatcctgaaaattgtgaaacgctgaaaggggaaggg
acagaagaaaaccaagatacaagtgcagagggcagagataaaacgctgctgtgtgaaaat
gctgtagaaatgcctggggaggttcccaaaagggctgtatcacagtttcaggagacaaag
cctgaacctgcagagaagaaggaggacatgcctaagacacaaagcaatgccactgagaaa
ggaaagtcgcctcctatcccaccaccgagaaggaagagagtttcccaggtaccaagcatc
cccagctcctgccagccgaagcaaagaacagcagcagagacggccgtggccacagggcag
gctgtgtgcaagggcagtccagctacagtgacatgtggtgccacttgggcacacagcaag
cctgaacagggacatggccacaaatctgtcagctcagctgaactggaagggtcacgcttg
tccctggaggacctgggaggcagcaccatggctcaggcatcaacatctgagccagactcc
tactccaccagcagcacagaggatgacctggagatgctgagtggttcatctggtaaaaag
acacgctccgtgatcttggccaaggccaaaaacaggctgtccttggtgaacctgtccaat
gtcttcacggtctttttgtctagtgacaggaagctgcagaagaagatagtggagctggca
caggacaaggagtcatactttggcaacctggtgcgggactacagagtgtacagtttagag
atgatggcaaagcagagctccagcacagagatgctacaagagatccggctgatgatgacg
cagctgaagagttacttagtacagagcactgagttgaaatcgctgatagacccagcctcc
tacactgaggaacagttagaagtgattgctgagacagctttgtacaaatgtgtcctgaaa
cctctaaaggaagccattaattcttccttaaaagaaatacacaacaaagatggatcttta
cagcagctgaaagagaaccaacttgtgatacaaaacacaactaccactgacctgggtgtc
acaaccagtgtgcctgaaactgctgtgctggaaaagatccttcacaagttcacaaccatg
cacaagacctattctccagaaaagaaaattgccatcttgctgaagacctgcaaactcatc
tatgactccatggctcagggaaatccagggaagccctatggtgcagatgacttcctccct
gtgctcatgtatgtgttggcccgcagcaacttgactgaagtccttcttaatgtggagtat
atgatggagctcatggaccctgctctgcagctaggagaaggctcctattatttaaccacc
acctacggggtcctggagcatatcaagaactatgacaaaatcactgtgacccggcagctg
agcgtggaggttcaggactccatccaccgctgggagcgacggagaacgctgaacaaggcc
cgggcttcccgctcatcagtgcaggatttcatctgtatctcctttctggaagtcagtggt
caatcaaggacacttgcttcccgtcgcgacaccacagctgagcagctgagccagcagtgt
gccgagaagtttgaagtgtctcatcccaaggactatggactctttgtttatgttgatgac
cagtggctgcagctggacaaagatgcccttccacatcatatcaaagcctcccttctgaag
agtgaaaccaagaaagattttaattttatttataaaccaattgaccataaaaccccacca
attccaattgtcaaagagtcagacttttcctaa
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