Lonchura striata (white-rumped munia): 110471404
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Entry
110471404 CDS
T05897
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
110471404
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsr01007
]
110471404
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110471404
Enzymes [BR:
lsr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
110471404
Amino acid related enzymes [BR:
lsr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
110471404
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
110471404
Prokaryotic type
110471404
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
DUF6437
Motif
Other DBs
NCBI-GeneID:
110471404
NCBI-ProteinID:
XP_021387693
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Position
10:6115207..6130299
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AA seq
790 aa
AA seq
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MAAAAAEAAELRLSRQERELRWLAAEVGRLKEPQELQCPGSASPELQRLRAENEKLRYRL
LHLRRSLAAELGRAAPAQPPAGGEKVSSANPADAANQIKKKKEDEAVNQHQNDLQCMPSF
IEDRLKLYEVLKKEHDALLAYRAANQSRSIKVTLTDGETVEGESWKTTPYQLAVGISQVL
ASNAVIAKVNGELWDLDRPLEGDCTLELLTFDNEEAKAVYWHSSAHILGEAMEGYFGGCL
CYGPPIENGFHYDMYIEDRSVSSTEFPLLENRCKNIIKEKQAFERLEVKKEILLDMFKYN
KFKCRILNEKVKTPTTTVYRCGPLIDLCKGPHVRHTGKIKALKIIKSSSTYWEGKSDMET
LQRIYGISFPDNKMMKEWEKIQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFLY
NTLVDFIRGEYRRRNFTEVVSPNVFNSKLWEASGHWQHYSENMFSFEIEKETFALKPMNC
PGHCLMFAHRPRSWRELPLRLADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTMEQIE
EEIKDCLDFLKSVYAVFGFTFQLHLSTRPENYLGDLEIWDHAEKQLQNSLNNFGEQWNLN
PGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVGKDGDDKKRPVIIHRAI
LGSVERMIAILAENYGGKWPFWLSPRQVMVVPVGPTSEQYAQQVCDQFFEAGFMSDVDLD
QSCTLNKKIRNAQLAQYNFILVVGEKEKANNAVNVRTRDNKVHGEISVSSTIEKLKKFKT
SQIANAEEEF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggccgaggcggcggagctccggctgtcgcggcaggagcgggagctg
cgctggctggcggcggaggtcggccggctgaaggagccgcaggagctgcagtgccccggc
agcgccagccccgagctgcagcggctgcgggccgagaacgagaagctgcggtaccgcctg
ctgcacctgcgccgcagcctggcggccgagctgggccgggcggcgccggcgcagcccccg
gccggcggagagaaagtctccagtgcaaatccagctgatgcagcgaatcaaattaaaaag
aaaaaggaagatgaagccgtgaaccaacaccagaatgatctccagtgtatgccaagcttc
atagaagacagactgaagctttatgaagtactgaaaaaagaacatgatgctttgctagct
tacagagcagccaaccagagcagatctatcaaagttactctgacagatggggagacagtt
gaaggggaatcttggaaaaccacaccatatcaattagctgtaggaattagtcaagtgttg
gcttcaaatgcagtcatagccaaagtaaacggtgaactctgggatctggaccgtccgctg
gaaggagattgtactctagagctgctcacctttgataatgaagaagccaaagccgtttat
tggcattcaagtgctcacattcttggagaggccatggaaggatattttgggggctgctta
tgctatggaccaccgattgagaatggatttcattatgacatgtatattgaagacagaagt
gtatctagtactgaattcccactactagagaaccgttgtaaaaatatcataaaagagaaa
caggcttttgaaaggctggaagtcaaaaaggagatcctgttagacatgtttaagtataac
aagttcaagtgtcgtatccttaatgagaaggtgaagacaccaactaccacagtatacaga
tgtggtccattgattgatctctgcaagggtccacatgtgagacacactggaaaaattaag
gcccttaaaataattaagagttcctctacatactgggaaggaaaatctgacatggaaact
ctgcagagaatatatggaatatcctttcctgataacaaaatgatgaaggaatgggaaaaa
atccaggaagaagccaaaaaccgggatcataggaaaattggaaaggagcaagaactcttc
ttctttcatgatttgagtcctggaagctgctttttcctccctagaggtgcctttctttat
aacacacttgtggatttcatacgaggggaatatcgcaggcgtaactttactgaagttgta
tctccgaacgtcttcaacagtaaactctgggaagcttcaggacattggcagcactacagt
gaaaatatgttctcttttgagattgagaaggaaacctttgcccttaaacccatgaattgt
ccaggacattgcttgatgtttgcccatcgtccccgatcctggagggaattgcctcttaga
cttgcagattttggagttcttcaccgaaatgaactctcaggcactttgagtggcttgact
cgtgtaaggcgcttccaacaagatgatgctcacatcttttgcacaatggaacagattgaa
gaagaaattaaagactgtcttgatttcttgaaatcagtgtatgctgtctttggctttacc
tttcaactacatctttctacaagaccagaaaattatcttggagatttagagatctgggat
catgcagaaaagcaacttcaaaacagcctgaataactttggagagcaatggaatttgaat
ccaggagatggagcattttatggtcctaagattgatattaaaatcaaagatgcaattggt
aggtaccatcaatgtgctaccatccaacttgacttccagctacccattcggtttaatctt
acttatgttggtaaggatggcgatgacaagaaaaggccagtgattattcacagagctatt
ttgggatctgtggagagaatgatagctattctagcagaaaattatggagggaaatggcca
ttctggctgtctccacggcaggtcatggttgtgcctgtgggccccacctcggaacaatac
gcccagcaggtttgtgatcaattttttgaagcaggatttatgtcagatgtggatctagat
caaagttgcacattaaacaagaaaattagaaatgcacagctggctcagtataacttcatt
ttagtggttggagaaaaggagaaagcaaataatgctgtcaatgtgcgaacaagagacaac
aaagttcatggagagatttcagtatcttctactattgaaaagctcaagaaatttaagact
tcacaaattgcaaatgcagaagaagaattctga
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