Lonchura striata (white-rumped munia): 110471600
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Entry
110471600 CDS
T05897
Symbol
SCML2
Name
(RefSeq) LOW QUALITY PROTEIN: sex comb on midleg-like protein 2
KO
K11465
sex comb on midleg-like protein 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110471600 (SCML2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110471600 (SCML2)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
110471600 (SCML2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
110471600
NCBI-ProteinID:
XP_031359560
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Position
1:16195675..16267968
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AA seq
790 aa
AA seq
DB search
MPPGRAAGPAAFDRSASRTRLPSPGRPRCLPRGGGCPSSGGDRPFPPTARAGEVLGTGVD
QESRMRVKNHLIPSARLCWETVVLKGRINWSFNFSLFIVRGEITEVLPWGEHQRKSRIPP
KNDFKVGMKLEAHDPRNVTSVCIATVIGITGARLRLRLDGSDNKNDFWRLVDSSDIQPIG
TCEKKGGMLQPPLGFQMNASSWPMFLLRTLNGAEIAPAAFFKKEPPKPVPNCFKVGMKLE
AIDRKNPYLICPATIGDVKGDEVFVTFDGWRGAFDYWCRCDSRDIFPVGWCSLTGDALQP
PGNNVSITKSSAKIQSSPSKVTRRSMQSPQKSAPVPAQRGRKPGRGKPPGQSAVPKKGRS
PKNIPLTKSTSHTENLKTRKKSLKPGKKKKFLPEQLTPTSLSPQSSPEGENGTAQILKDG
ISLSGATAAVISTVCVYVNKHGNSGPHLDKKKVQQLPDHFGPGPVNVVLQQAVQACVDCA
YQAKTVFGFLKSGHHGGEVITASFDGEKHTINLPSVNSASFVLRFLEKLCHSLQCDNLFS
SQPFSPYMGCAHSPMEYDRNKPAKEEIPENKSAKRYPQDSPPYTAPLSPKLPRNDAHPSE
AETLPIEENSTSKDHRFSEDSMDSALNSVNPSNPTCRNSTEYRTSGNAAYYRNSHQPATA
TSNSAPVLRRLSLSSAGSSGYYEVSRNRIQRRIEAASSTTGPDLNSLKREPSRIVNKDPS
TWSIEEVVHFVKEADPRALAPHAELFRRHEIDGKALLLLRSDMIMKYMGLKLGPALKLCY
HIERLKQGKF
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgggacgagcggcggggccggcggcgtttgacaggagcgcgagcaggacacgc
ctcccctcgccggggcggccccgctgcctcccccgcggcggtggctgcccgtcctccggc
ggggatcgtcccttcccgccgaccgccagggctggcgaggtgctggggacgggcgtggac
caggaaagccggatgcgtgttaaaaatcatttaattccgagcgctcgcttgtgttgggaa
actgttgtgctgaaaggaagaattaactggtctttcaacttcagcctttttattgtgaga
ggggagatcacagaagtgttaccatggggagaacatcagcgaaagtctagaattccgcct
aagaacgatttcaaagttggtatgaaactggaagcccacgatcctcgcaatgttacctca
gtttgtatcgctactgtcatcggaatcactggtgccaggctaaggttgcggctcgatgga
agtgacaacaaaaatgatttctggaggcttgtggattcctcagacatacagcccattggg
acctgtgaaaagaaagggggcatgctccagcctccacttgggttccagatgaatgcatcc
tcttggccaatgtttctcttaagaactctcaatggagctgaaatagcacctgcagcattc
tttaagaaggaaccaccaaaacctgtgccaaactgctttaaagttggaatgaaacttgaa
gctatagatagaaagaacccatacctgatttgcccagcaaccattggagatgttaaagga
gatgaagtttttgttacatttgatggttggagaggagcatttgactattggtgcaggtgt
gattctcgagatattttcccagttggatggtgtagcttgacaggcgatgcattacaacca
ccagggaacaatgtttccattacaaagagcagtgcaaaaatccaatcttccccttccaaa
gtgacccggcgttcaatgcagtctccacagaaatctgctccagtaccagcgcagcggggc
aggaaaccaggtcggggcaaaccccctggacagtctgcagttcccaagaagggcaggtct
cctaaaaatattcccctgacaaaaagcacctctcatactgaaaatcttaaaacaaggaaa
aaaagtttaaaacctggaaaaaagaaaaaattcttgccagaacaactgactcctacatct
ctttctcctcagtcatctcctgaaggggaaaatggcactgcacagatacttaaagatgga
atcagtttgtctggtgcaactgcagcagttatatccacagtgtgtgtttatgtgaacaaa
catggaaattctgggcctcacctggataagaagaaggttcagcagcttccagaccatttt
ggaccaggtcctgtaaatgtggtacttcagcaggctgtacaggcttgtgtggattgtgcc
tatcaagccaaaacagtctttggatttctgaaatctggccatcatggaggggaagtgata
actgcttcctttgatggggaaaagcacaccatcaatcttccttctgtaaacagtgcatcg
tttgtcctacgcttcttggagaagctctgccacagcctgcagtgtgataatctgttcagt
agccagcctttcagcccttacatgggatgtgcacatagtcctatggagtacgacaggaat
aagccagccaaagaagaaatacctgaaaacaagagtgctaaacgataccctcaggactct
ccaccatacactgctcctctttcccctaagcttcccagaaacgatgctcatccatctgaa
gcagaaacattgcctatagaggaaaacagcacttccaaagatcaccgattttctgaggat
tctatggattctgcacttaattctgtaaatccgtcaaacccaacctgtcgaaattccaca
gagtaccgcacttcaggaaatgctgcatattacagaaattctcatcagccagcaactgct
acctcaaattcagccccagtcctgcgcaggctgtccctgagctcggctggcagcagtggt
tactatgaagtcagcaggaatcggatacagaggcgcattgaagctgcaagctccacaact
ggaccggatttgaattcactaaaaagggaaccttcaagaatagtgaataaggatccttcc
acctggtcaatagaggaagtagtgcattttgtgaaagaagctgatccacgggcactggct
ccacatgctgaactcttcaggagacatgaaattgatgggaaggcactactcttactgagg
agtgatatgattatgaagtatatgggactgaaactggggcctgccctaaagttgtgctac
cacattgaacgacttaaacaaggaaagttctag
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