Lonchura striata (white-rumped munia): 110471618
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Entry
110471618 CDS
T05897
Symbol
CLTRN
Name
(RefSeq) collectrin
KO
K20004
collectrin
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110471618 (CLTRN)
Membrane trafficking [BR:
lsr04131
]
SNARE
SNARE associated proteins
Others
110471618 (CLTRN)
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Gene cluster
GFIT
Motif
Pfam:
Collectrin
TMEM127
EphA2_TM
DUF7027
MscL
DUF6568
Saf_2TM
INSIG
YajC
UPF0524
Motif
Other DBs
NCBI-GeneID:
110471618
NCBI-ProteinID:
XP_021388025
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All DBs
Position
1:17378227..17401095
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AA seq
224 aa
AA seq
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MLRALLLLVSVVAIAHAELCKPDAQNAFKVRISIKTALGDNAYAWDANEEYLFRAMVAFA
MRRYSSKSTTQISNVLLCNVTDRVSFWFVVTDSSKNVTTVPGSEVEAAIRMNRNRINNAF
LLSDKTLQFLKITSTLSPPVEPSTPVWIIVFGVVLCLIVAGIVFLIVSGIQKHKKKNKES
TERENLEEKVEVTLENGIPCEALDLKAGHINGVFAADDERFTSL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgttacgggctttgctgcttttagtttctgtagttgccattgctcatgctgagctctgc
aagccagatgcacagaatgctttcaaagtacggattagtatcaaaacagctttgggagat
aatgcatacgcctgggatgctaatgaagagtacctcttcagagcaatggtggcttttgca
atgagaagatattctagcaagagcacaactcaaatttccaatgtgctgctctgcaacgtg
acagaccgagtgtccttttggtttgtggtcacagattcttctaaaaatgtaacaactgtt
cctggaagtgaggtggaagcagccatcaggatgaaccggaacagaatcaacaatgccttc
ttactgagtgacaagacactgcagttcctgaagataacatcaaccttgtcacctcctgtt
gaaccctctacacctgtctggattattgtatttggtgttgttctttgtctcattgtggct
gggattgttttcctcattgtttcagggattcagaaacacaagaaaaagaataaagagtca
acagagagagaaaatttagaagagaaagttgaagtgacactagaaaatgggattccttgt
gaagcactggatttaaaagcaggccacattaatggagtctttgcagcagatgatgaacgg
ttcacgtccctatga
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