Lonchura striata (white-rumped munia): 110471707
Help
Entry
110471707 CDS
T05897
Symbol
CENPC
Name
(RefSeq) LOW QUALITY PROTEIN: centromere protein C
KO
K11497
centromere protein C
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110471707 (CENPC)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
110471707 (CENPC)
Mis6 complex
110471707 (CENPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-C_C
CENP_C_N
Cupin_2
Cupin_3
Motif
Other DBs
NCBI-GeneID:
110471707
NCBI-ProteinID:
XP_021388288
LinkDB
All DBs
Position
4:26953216..26982243
Genome browser
AA seq
971 aa
AA seq
DB search
MGRGRGGVAGMPPAVRXRAPARREGCARFEGGAGSALRPRSGMAQALNRLKKDYRARFCH
GGGNKIDLQPGQNVLKVIQDCFESCSSDLTTNSPNCSSFVLKDEKRTSESRQSPKARSAS
SVKRARKSTEPSSASPLKPVSSRGQSCESYLKLATPDDVATSKRTESPVSESEKKNTLKD
IEASCQHPAMPLHPKNHRGSVGSPVPLEEVKSSPAVKVHFDRCSTPAAAKSHGEVENLEG
PQPGRVEQVVPMQGTECVTASSARTEKTFSSAVLAAVATRTLGQRYSTLRSAPSPHPVKY
QEIDTENECEFLIDESCGTSFTSWISIPTKNKKSKNDGSATPISKLQPSEKEKTKNKKAK
KRKAEAKVLTKQKLGHLDVEAFDLKEMSESDSVSNSEENVLASQSLKSTHKGKTKKDAFR
QDSPNQKKSTSWKREAEELMRSLPGLETKPSDEEQCKTRMPNEDLPLPSSGHEEEQTVSL
KKSLRSSKNLQLASKASQQLDKKKQTAKQKLPKVKVAKTGTVSPRKKLKISVQKSSNKKP
QLQREESSDSEPEEEIEREPVELNEVFTTPLHQKLETPMIQKLTKSEKPRNVIHTSESPG
GANNRTLKALQHPVESVKNPGKKRSAKSSGKKPKKIPCRTSKALRSSREGPESQTDSDSS
SVQDMARRKQKLPDVKIKSNKRKRDRQHGPQGSFVAGKVEKSGPVLEDGDELACSPKPPE
QDDTSSDSSEDLNYKLRHLLSDEIARHKIVMPSNTPNVRRTKRIRLRPLEYWRGERINYT
MEPSGGLVISGLLHPEAECPRKCEKRKDCAKHKTDKTTSDRGEIPASLDHSLADVSKPAI
VLDPVTNKEVHLDCINTARNRSYFFKDEAIKIQKNLNTSLFATGILFVKPYKEKGHQFVG
MDTIAFHIVHGKVIVTLHETSYCLTTGDCFYVPAGNRYNIRNLLNEESVLLFTQLKDRTR
PRNVLLDASSP
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggacggggccgcggaggcgtggccgggatgccgccggccgtgcgcnngcgcgcgcct
gcccggcgggaagggtgcgcgaggttcgaaggcggcgcggggagcgcgctccggccccgg
tctggtatggcgcaggctttgaatcgtttaaaaaaagactacagagcaaggttctgccat
ggaggaggaaataagattgatctacagccaggtcaaaacgtattgaaggtcatacaggat
tgttttgaaagttgtagcagtgatcttacaacaaactctccaaattgctcaagctttgtt
ttgaaagatgagaagaggacttcagaatcaagacaaagtcccaaggcaaggtcagctagc
tctgtgaaaagagcccgtaagtctacagaaccctcatctgcatcaccgctaaaaccagtc
agcagcagaggacagtcatgtgaatcgtacctaaagcttgcaacacctgatgatgtagct
acttctaaaaggacagagtctcctgtgtctgaaagtgaaaaaaaaaatactttaaaagac
attgaagcatcctgccagcatccggccatgcctttgcaccctaagaatcatcgtgggtct
gttggatcaccagttcctctggaggaagtgaaaagttctcctgcagttaaagtgcatttt
gataggtgcagtacaccagctgcagcaaagagtcatggagaagttgaaaatttggaagga
cctcagcctgggagagttgagcaggttgttcctatgcaaggaacagaatgtgttactgca
tcatctgcccggacagagaagactttctcttcagctgtcttagcagctgtagcaacaaga
acacttggacagagatattcgaccttgagatcagcaccatcacctcatcctgtgaaatac
caagaaatagatacagaaaatgaatgtgaatttttaattgatgaatcatgtggcacatct
tttacttcttggatttcaatacccactaagaacaaaaaatcaaaaaatgatggctctgca
actccaatttctaaacttcagccttctgaaaaggagaagacaaagaataagaaagccaag
aagagaaaagcagaggctaaagtacttactaaacagaaactgggtcatctggatgttgaa
gcttttgacttgaaagaaatgtcagaatcagattcagtctctaatagtgaagaaaatgtc
cttgcatctcaaagcctaaagagtactcataagggaaagactaaaaaggatgcatttaga
caagactctccaaaccagaaaaagagcacatcctggaaacgagaagctgaagaacttatg
cggtcattgcctggattggaaacaaaaccatctgatgaagagcagtgtaaaacacgcatg
ccaaatgaggatttgcctctgccgtcatctgggcatgaggaagagcagaccgtgtcactg
aagaagtctctcaggtcttccaagaatctgcagttggcttctaaagcttctcagcagtta
gacaagaagaaacagactgctaagcagaaacttccaaaagtcaaagtagctaagacaggg
acagtaagtccaaggaagaagcttaaaatatctgtccagaaaagtagtaataaaaagcct
cagttgcaaagagaggagagttctgacagtgaacctgaagaagagattgaaagagagcct
gtagaactgaatgaagtgttcaccacacccttgcatcagaaattagagactcccatgatt
cagaagttgactaagtctgaaaagcctagaaatgtaatacacacatcggagtcacctggt
ggtgcaaataacagaactctaaaagcactccagcatcccgtggagagtgtgaagaatcct
ggaaagaaacggtctgccaagtcttcagggaagaaacccaaaaagattccatgtagaacc
agcaaagctcttcgctcaagccgtgaaggccctgagtctcaaacagattctgacagctct
tctgtacaggacatggcaaggagaaaacagaaattaccagatgtgaaaataaaaagtaac
aaaagaaaacgtgacagacagcatggaccacagggttcctttgtagctgggaaggttgag
aaaagtgggcctgttctagaagatggcgatgaacttgcttgcagccctaagcctcctgag
caggatgatacatcttccgatagttccgaagatttgaattacaaattaagacatctgttg
tcggatgaaatagcaaggcataaaatagttatgccttccaatacacccaatgttcgtcgg
acaaaaaggatacggctgagacctctggaatattggagaggcgagcggataaactatact
atggagccttcaggagggcttgtgattagtggactactgcatccagaagcagaatgtccc
aggaagtgtgaaaagaggaaggattgtgccaagcataaaacagataaaacaacctcagat
agaggagagatacctgcaagtttggaccacagtctagctgatgtgtctaagccagccatt
gtactggacccagtaacaaataaggaagtgcatctagattgtataaacactgcaaggaat
cgcagttacttcttcaaagatgaagcaataaaaatacaaaaaaatttgaatacatctctt
tttgcaactggtatattgtttgtgaaaccatataaagaaaaagggcaccagtttgttggc
atggatacaatagctttccatattgtccatggcaaagttattgtgacattacatgagaca
tcatactgcctgactacaggggactgcttctatgttccagcaggaaatagatataacata
cgtaatcttctgaatgaagaaagtgttcttctcttcacacaactcaaagacagaacaaga
ccaagaaatgtgttgttggacgcctcttctccataa
DBGET
integrated database retrieval system
