Lonchura striata (white-rumped munia): 110471744
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Entry
110471744 CDS
T05897
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
110471744 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsr04040
]
110471744 (KCNMA1)
Ion channels [BR:
lsr04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
110471744 (KCNMA1)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
SR-25
Motif
Other DBs
NCBI-GeneID:
110471744
NCBI-ProteinID:
XP_031361046
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Position
6:12760066..13193967
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AA seq
1300 aa
AA seq
DB search
MANGSGGGSYPGGSGSGIRMSNNINANNLNTDSSSSPVNVPKMDALIIPVTMEVPCDSRG
QRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGVKNKEAQKINGGADTQADGAC
KPTDEKEENVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSKS
RTADSLIPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFT
VPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTA
AGFIHLVENSGDPWENFQNNQPLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFIL
GGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRD
DVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKY
CADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAEL
KLGFIAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLS
FPAVCELVFAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKIQEGTLGFFIASDAKEV
KRAYFYCKACHDDITDPKRIKKCGCKRLATRRAKHMESMPDVEGMYALPNILEKNCSRTV
YPCENVTFELLPKPMSLPIEDEQPSTLSPKKKQRNGGMRNSPNSSPKLMRHDPLLIPGNE
QIDNMDANVKKYDSTGMFHWCPAKDIEKVILTRSEAAMTVLSGHVVVCIFGDVKSALIGL
RNLVMPLRASNFHYHELKHIVFVGSLEYLRREWETLHNFPKVSILPGTPLSRADLRAVNI
NLCDMCVILSANQNNIDDASLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRT
SPDNSPVHGLLRQPSITTGANIPIITELAKPGKLLPLVSISQEKNSGTHILMITELVNDS
NVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGAT
PELEALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKT
YNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASL
SHSSHSSYSSSKKSSSVHSIPSTANRPNRTKSRDSRDKQNATRMNRMGQAEKKWFTDEPD
NAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggcagcggcggcggctcctacccgggcggcagcggcagcggcattagaatg
agtaacaatatcaacgccaacaatctcaacacagactcgtcctcctcccccgtcaatgtg
cccaagatggatgcgctcatcatcccggtgaccatggaggtgccctgcgatagccgcgga
cagcgcatgtggtgggctttcctcgcctcatccatggttactttctttgggggactgttt
atcatcctgctctggaggaccctcaagtacctgtggactgtctgctgccactgcggggtc
aaaaacaaggaggcccaaaagatcaatggtggtgcagatacacaggcagatggagcctgc
aaaccaacagatgaaaaagaggagaatgtggcagcagaagtgggatggatgacgtctgtg
aaggattgggcaggagtcatgatatctgcccagacattaactggcagagtacttgttgtc
ttagtcttcgctcttagtattggtgctcttgtaatatacttcatagattcatcaaagagc
cgtacagcagactcattgatcccaatagaatcctgccagaatttctacaaagatttcaca
ttacagatcgacatggctttcaatgtgttcttcctactctacttcggcttgcgttttata
gcagccaatgacaagctatggttttggctcgaagttaactcagtggtagatttctttacg
gtccctccagtgtttgtgtcagtatatttaaacagaagttggcttggtttaagattttta
agagcccttagactgatacagttttcagaaatcttgcagtttctgaatatacttaaaaca
agtaattccatcaagctagtgaatctgtgctctatatttatcagcacgtggctgacggca
gctgggttcatacatttggtggagaactcaggggatccatgggaaaatttccaaaataat
caaccgctaacatattgggaatgtgtttatttgctgatggttacaatgtccactgttggc
tatggagatgtttatgcaaaaacaacccttggtcgccttttcatggtcttcttcatcctt
gggggattggccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatatggtggttcctatagtgcggttagtggaagaaagcacatagttgtctgtggg
cacataacacttgaaagtgtgtcgaacttcctgaaggacttcctgcacaaggatagggat
gatgtcaatgtagaaattgtctttctgcataatatctcccctaaccttgagctggaagct
ctttttaaacgacacttcactcaggtggaattttatcagggttcagtccttaatccccat
gacctggcaagagtgaagatagagtcagcagatgcgtgcctaatccttgccaataaatac
tgcgctgacccagatgctgaagatgcctccaatattatgagagttatttccataaagaat
tatcatccgaagataagaattatcactcagatgttgcagtaccacaataaggcccatcta
ctaaatatcccaagctggaactggaaagaaggggatgatgcaatctgtcttgctgagctg
aagctgggtttcatagcccagagctgcctggcaccgggcctttcaacaatgttagccaac
ctcttctctatgaggtcattcataaagattgaggaggatacgtggcagaaatactacctg
gaaggagttgcaaatgaaatgtatacagaatatctgtctagtgcctttgtgggtttgtcc
ttcccagcagtttgtgagctggtgtttgcgaagctgaagctcttaatgatagccatagag
tacaagtcggagaaacgcgaaagcagaagccgaaagcgtatattaatcaatcctggaaac
catgtcaagattcaagaaggtaccttaggattcttcattgcaagtgatgccaaagaagta
aaaagggcatatttttactgcaaggcctgtcatgatgacatcacagatcccaaaaggata
aaaaaatgtggctgcaaacggctagccacaaggagagcaaagcacatggaaagcatgcct
gatgtggaaggaatgtatgcattgcctaacatattggaaaaaaattgttcaagaacagtt
tatccatgtgagaatgtgacctttgaactgctgccaaagccaatgagtctgccgattgaa
gatgagcagccatcaacactatcacccaaaaaaaagcagcgaaatggaggcatgagaaat
tcacccaactcctcacccaaactgatgaggcatgaccccttgttaattcctggcaacgag
cagattgacaatatggatgccaacgtgaaaaaatacgactctacagggatgtttcattgg
tgtccagccaaagacattgaaaaggttattttgactcgaagtgaagcagcgatgacagtt
ttaagtgggcatgtagtcgtttgcatatttggggatgttaaatctgctttgattggatta
agaaatttagtgatgccattacgagccagcaactttcactaccatgaactcaagcacatt
gtatttgtgggttcacttgaatacctgagaagggaatgggagacactgcataacttcccc
aaggtttcaatcttgcctggtacgccattaagtcgggctgatttaagggctgtcaacatc
aacctctgcgacatgtgcgttatcctgtcagccaatcagaataatattgatgatgcttcg
ctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgac
agcattggggtcttgcaggctaattcccaaggctttacaccccctgggatggataggaca
tctccagacaatagtccagtccatggcctgttacgtcaaccctccattacaacaggagcc
aacatccctattataacagagctagctaagcctggcaaacttctgcctttggtttcaatc
agtcaggaaaaaaacagtggaacccacattctaatgataactgaactggtaaatgattca
aatgttcagttcttggaccaagatgatgatgatgaccccgacacagaactgtatctcacg
cagccttttgcatgtggaaccgcgtttgccgtcagcgtgctggactctctcatgagcgca
acatacttcaatgacaatatcctcacactgatacggacattggtaacaggaggagccaca
ccagagctggaagcactgattgctgaggaaaatgcattgagaggaggttacagcacgccc
cagacacttgcaaacagggacaggtgtcgagttgctcagctggctttgtatgatgggcca
tttgcagacctaggggatggaggttgttatggagatctgttttgtaaagcactgaaaaca
tacaatatgctttgctttggaatttatcgattaagggatgcgcatctaagtactcccagc
caatgcactaaacgttatgttatcacaaacccaccatatgaatttgagcttgtgccgacg
gacttgatcttctgtctgatgcaatttgaccacaacgctggccagtcccgagccagcctc
tctcattcctcccattcctcctactcttccagcaagaagagctcatcagttcactccatc
ccatcaacagcaaaccgaccgaaccgcaccaagagcagggattcccgggacaaacagaat
gcaacaaggatgaatagaatgggccaagcagaaaagaaatggtttacagatgagccggat
aatgcctaccccagaaacattcaaatcaagcccatgagcactcacatggccaatcagatc
aatcaatataaatctacaagcagcttgataccaccaatacgagaagttgaagatgaatgt
tga
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