Lonchura striata domestica (Bengalese finch): 110471784
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Entry
110471784 CDS
T05897
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsr03009
]
110471784 (DDX55)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110471784 (DDX55)
Ribosome biogenesis [BR:
lsr03009
]
Eukaryotic type
Pre-60S particles
Helicases
110471784 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SBF_like
SHOCT
AAA_22
Motif
Other DBs
NCBI-GeneID:
110471784
NCBI-ProteinID:
XP_021388455
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All DBs
Position
15:12039599..12047185
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AA seq
596 aa
AA seq
DB search
MAAAAEGGWGSLPVPLSPGVLRALRQLRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMVCRADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYVNFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAMFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNHRFKAGTIEDIESEG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctgagggcggctggggctcgctgccggtgccgctgagcccgggcgtg
ctgcgggcgctgcggcagctccgcttccaccaaatgaccccggtgcagtctgcgaccatc
ccgctcttcatgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaacc
ttggcgtttgtgattcccatactggaaattcttctcagacgggaggaaaagttaaagaaa
atgcaggttggagctataattattacaccaacgagggaattggccattcagattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttttaattggtgga
aggaaccccatggaagatgttgagaagttcaaggagcatggtggcaacatcatcgtggcc
accccgggccgcctggaggatctgttcaggaggaaagctgacgggctggaccttgccagc
tgtgtgaaggctctggatgtgctggtgttggatgaagcagacagacttctagatatgggc
tttgaagcaagcttgaatgccattctggactttttgcccaagcagaggaggacaggtctg
ttctcagctacccagacccaggaggtggagaacctggtgagggcagggctgcggaacccc
gtccgcatctcggtcaaggagaagggagtggcagccagcaacacccagaaaaccccaaca
cgcctggagaactactacatggtctgcagagcagatgaaaaatttaaccagttggtgcat
tttcttcggcagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcctgtgtg
gaatactatgggaaggctctggaatccttaattaagcaggtgaaaataatgagcatccat
gggaaaatgaagcacaagcgtaacaagattttcacggagttccgtaagctcccagggggc
attttggtgtgcacagatgtgatggcccgtggcattgacattccagaagtgcactgggtg
ttgcagtacgacccacccagcagtgccagtgccttcgtgcatcgctgcggtcgcacggcg
cggatcggcaacgtgggcagcgctctggtgtttttgcttcccatggaagaatcctacgtg
aacttcctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccgcagacaaatgtg
ttggatcttcttcccaagctgaagtccatggccctggctgacagggcaatgtttgagaaa
gggatgaaagcctttgtgtcttacgtccaggcttatgccaaacacgaatgcaatctgatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaattaagaggaaaatgttttccagactttactccagtcactgtcaat
acagactccatttcatttaaggataaaaacagagaaaagcagagacaaaagaaattagaa
gaacaaagaaaagaaagagaggaaaatcaagggaaaaagaaatttgtaaagaacaaagca
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaaaaggaagcgt
gaagagggctctgatattgaagatgaggatatggaagagttgctgaatgacacaagactc
ttaaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggc
aaccacaggttcaaagcaggaactattgaggacatagaatctgaaggctga
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