Lonchura striata (white-rumped munia): 110471864
Help
Entry
110471864 CDS
T05897
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110471864 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110471864 (SMARCE1)
03036 Chromosome and associated proteins [BR:
lsr03036
]
110471864 (SMARCE1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110471864 (SMARCE1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110471864 (SMARCE1)
PBAF complex
110471864 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
110471864
NCBI-ProteinID:
XP_021388582
UniProt:
A0A218UN58
LinkDB
All DBs
Position
27:complement(2997795..3013408)
Genome browser
AA seq
412 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTESFNNELKRLCSLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQNSLAAEEEQTASKGEEKKEEESTPMETEEPHPEESTENQQNGEEG
TSTPEDKESGQEGVDSTAEEGTSDSNTGSESNSATVEEPPADPITEEGEKKE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcctatgccccacctcccaccccagctcctgcaacccaaatgccc
agcaccccagggtttgtgggatacaatccatacagccatctggcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcttcctctggtattaccattcca
aagccccccaaacccccagacaagcccctgatgccctacatgaggtacagccggaaggtc
tgggaccaagtgaaggcgtccaatcctgatttgaagttatgggaaattggcaagattatt
ggaggaatgtggcgagatctcactgatgaagagaagcaagagtatttgaatgaatatgaa
gctgaaaagatcgagtacaacgagtccatgaaggcctaccacaactcccctgcctacctg
gcctacatcaacgccaagagccgcgccgaggcggcgctggaagaggagagccggcagcgg
cagtcgcgcatggagaagggggagccctacatgagcatccagcccgcggaggatcccgat
gattacgacgatgggttctccatgaagcacacggccacggctcggttccagaggaaccac
cggctcatcagcgagatcctgagcgagagcgtggtgcccgatgtccgctccgtggtcacc
acagccagaatgcaagtcctgaaacgccaggttcagtccttaatggttcatcagcgtaag
ctcgaagctgagctgctgcaaattgaggagcgtcaccaggaaaagaagaggaagtttttg
gaaagcacagaatctttcaacaacgagcttaaaaggttatgcagtttgaaggtggaagtg
gatatggaaaaaattgcagctgaaattgctcaagctgaggaacaggctcgcaagagacag
gaggaaagggaaaaggaagcagcagagcaggctgagcgcagtcagaacagcctggcagct
gaggaggagcagacagccagcaagggggaggagaagaaggaagaggagagcactccaatg
gagacagaagagcctcacccagaagagagcacagagaaccagcagaacggtgaagaagga
acctccaccccagaggacaaggagagtgggcaggaaggggtggacagcacagctgaggag
ggaaccagcgacagcaacaccggctcggagagcaacagcgcgaccgtggaggagccgccc
gcagaccccatcaccgaggagggcgagaagaaagaataa
DBGET
integrated database retrieval system
