Lonchura striata (white-rumped munia): 110471871
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Entry
110471871 CDS
T05897
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04080
Neuroactive ligand-receptor interaction
lsr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110471871 (THRA)
04081 Hormone signaling
110471871 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110471871 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsr03310
]
110471871 (THRA)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110471871 (THRA)
Nuclear receptors [BR:
lsr03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
110471871 (THRA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110471871
NCBI-ProteinID:
XP_021388596
UniProt:
A0A218UN29
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Position
27:2799493..2812694
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AA seq
408 aa
AA seq
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MEQKPSTLDPLSEPEDTRWLDGKRKRKSSQCLVKSSMSGYIPSYLDKDEQCVVCGDKATG
YHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCVIDKITRNQCQLCRFKKCISVGMAM
DLVLDDSKRVAKRKLIEENRERRRKEEMIKSLQHRPNPSAEEWELIHVVTEAHRSTNAQG
SHWKQKRKFLPEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSEL
PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDL
GKSLSAFNLDDTEVALLQAVLLMSSDRTGLICVEKIEKCQETYLLAFEHYINYRKHNIPH
FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagcccagcaccctggacccgctgtcggagccagaggacacccggtggctg
gatgggaagcgcaaaagaaagagcagccaatgtttggtgaagagcagcatgtcagggtac
atccctagttacctggacaaagatgaacagtgtgtggtgtgcggggacaaggccaccggc
taccactaccgctgcatcacctgcgagggctgcaagggatttttccgtcggaccatccag
aagaacttgcaccccacctactcctgcaaatacgatgggtgctgcgtcatcgacaagatc
acccgcaaccagtgccagctctgccgcttcaagaagtgcatctccgtgggcatggccatg
gacttggtgctggatgactccaagcgggtagccaagcgaaagctgatcgaggagaaccgg
gagcggcggcggaaggaggagatgatcaaatccctgcagcaccgccccaaccccagcgcc
gaggagtgggagctgatccacgtcgtgacagaagcccaccgcagcaccaatgcccagggc
agccactggaagcagaagcggaaattcctgcctgaggacatcggccagtcccctatggcc
tccatgcccgacggggacaaagtcgacctggaggcgttcagtgagtttacaaaaatcatc
accccggccatcacccgcgtggtcgactttgccaaaaaactgcccatgttttcagagctg
ccttgcgaggaccagatcatcctgctgaaggggtgctgcatggagatcatgtcgctgcgg
gcggccgtgcgctacgaccccgagagcgagacgctgacgctgagcggggagatggcggtg
aaacgcgagcagctcaagaacggcggcctcggcgtcgtctccgatgccatcttcgacctg
ggcaagtccctctctgccttcaacctggatgacaccgaggtggccctgctccaggctgtg
ctgctcatgtcctcagaccggacggggctgatctgcgtggagaagatcgagaagtgccag
gagacctatctgctggcctttgagcactacatcaactaccgcaaacacaacattccccac
ttctggcccaagctgctgatgaaggtgacggatctgcggatgatcggcgcctgccacgcc
agccgcttcctgcacatgaaggtggagtgtcccaccgagctcttcccacccctcttcctc
gaggtcttcgaggaccaggaggtgtag
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