Lonchura striata (white-rumped munia): 110471875
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Entry
110471875 CDS
T05897
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsr03021
]
110471875 (MED1)
Transcription machinery [BR:
lsr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
110471875 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
110471875
NCBI-ProteinID:
XP_021388602
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Position
27:complement(2506680..2526131)
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AA seq
1582 aa
AA seq
DB search
MKAAPGSAEEAEKLNKMSSLLERLHAKYSQNRPWTETIKLVRQVMEKRVVLNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQSGLGSHLSANGTECYITSDMFYVEVQLDPAGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLRGLVNLYKLPGDNKLKTKMYLALQS
LELDLQKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYVSPYDLFEDGTGAP
VVLHENSVPRSLGMNVSVTVEGTMAMHKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQSCTGIPLFDTAPTFVPLYELITQFELSKEADPLPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSSHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSTIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPATYPQALPHAQPSIQRMVRLSSSDSIGPDVT
DILSDIAEEASKLPTSTEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNSSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDTDDFKGYGPQ
ALTNLGVQVLGADGGENKFKGSAPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNTG
DLGKEKSQKRVKEGNGSGSAMAGAGIDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSKSEGSSGSKMSSSLYSSQGGSGSG
QSKGSAQSVGKPGSSPITKHGLSTGSGSTKMKPQGKPSSLMNPSMSKPNISPSHSRPSGG
SDKLASPMKPVPGTPPSSKAKSPIGSGSGGSHMSGAGSSSSMKSSSGMGSSGSMSQKPPP
SSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGG
DDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKEKSKVSVSGGSVDSSKKNSDS
KNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDGLRPQMASSKSYGSPLISGSTP
KHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSAEKHKKHK
KEKKKVKDKDRDRERERDKDRDKKKSHGVKPESWSKSPISADQSLSMASNAILSAERPSR
ASPEFLIGEEDDDLMDVALIGN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccgcgcccggcagcgccgaggaggcagagaagctgaacaagatgagctccctc
ctggagaggctccacgccaagtacagccagaaccggccctggacagaaaccatcaagttg
gtcagacaggtcatggaaaagcgtgtggtgctgaactcggggggacaccagcacctggtg
agctgcttggagacactgcagaaggccctgaaagtgtcgtctctgcctgccatgaccgat
cgcttggagtccatcgccaggcagagcggcctggggtcccacctgagtgcgaacggcacc
gagtgctacatcacctcagacatgttttatgtggaagtgcagctggaccctgcagggctg
ctctgtgatgtcaaggtggctcaccatggagaaaaccccgtgagctgtccagagctggtg
caacatctgagggagaaaaattttgatgagttttcaaagcatctgaggggacttgtgaac
ctgtataaactgccaggggacaacaaacttaaaactaaaatgtacttggctctgcagtcc
ttggagttggatctccaaaagatggctgggatgtattggcaagccaccaatgcaaacccc
ctggacaaaatccttcatggcagtgttggctatctcacccccaggagtggaggtctcctg
atgaacctcaaatattacgtctccccctatgatttatttgaggatggcactggagccccc
gtggttttgcacgagaacagtgttcctcgctcgctgggtatgaacgtgtcggtgacagtc
gagggaaccatggccatgcacaaacttccaattgctccactgatcatgggctcccatcct
gtggacagcaaaggaactccgtctttctcctcgatcaccagtgccaacagcgtggatttg
cctgcttgtttcttcctgaaattcccacgtcccattccagtgtctcgagctttcatccag
aagctgcagagctgcacaggtatccccctgtttgacacagcacccacgtttgtgcccctc
tatgagctgatcacgcagtttgagctgtccaaggaggccgatcccctgcccctgaaccac
aacatgcgcttctacgccgctcttccaggacagcagcactgttacttcctgaacaaagac
gctcctctcccggacggacgaagcctccagggaactctgatcagcaaaattgctttccag
cacccgggcagggtgcccctcatcctcaacctgatccggcaccaggtggcctacaacacc
ctcatcggcagctgtgtcaagaggacagtcctgaaggaagattctccgggcatcctgcag
tttgaagtttgtcctctctccgactcgtgtttcagtgtgtccttccagcaccctgtgaac
gactccctggtgtgtgtggtgatggacgtgcaggactccagccacgtgaactgtaagctc
tacaaagggctgtctgatgccctcatctgtacagatgatttcattgccaaggttgttcaa
aggtgcatgtccatccctgtcaccatgagagccatccgtaggaaagcagaaaccatccaa
gctgacacgccggccctgtccctcattgcagagacagttgaggacatggtgaagaaaaac
ctgcccccagccagcagccccgggtatggcatgaccacgggcagcaacccaatgagtggg
accaccaccccaaccaacacttttcctggggggcccatcactactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccatggggaggacttcagcaaagtgtct
cagaacccaattctcactagtttgttgcagatcacaggcaatgtggggtctaccattggc
tcaagtccaaccccaccccaccacacgccaccaccggtatcctcaccagccagcaacacc
aagaaccaccccatgctcatgaaccttcttaaggagaatccccctcaggatttctccact
ctctatgggagcagccctctggaaaggcagaattcctcctctggctcccccaggatggaa
atgggccctggggggaataaacaaaagaaaaaaaaatcccgcatgccggccgacaagccc
aagcaccagactgaggacgatttccagagggagctcttttccatggacgttgactcccag
aaccccatttttgatgtcaacatgactgcagacaccctggacacccctcatattactcca
gcacccagccagtgcagcactcctcctgccacctacccccaggcgctgccccacgcccag
cccagcatccagaggatggttcgcctgtccagctcggacagcatcgggcccgacgtcacc
gacatcctctcggatatcgcagaggaggcttccaagctgcccaccagtaccgaggactgc
ccgcccattgggactccagtcagagactcctccagttcaggacattcacaaagtgccctc
tttgaccccgatgtttttcagaccaacagcagtgagaacccctacacagaccccgcggac
ctgatcgccgacgccgctgtgagccccaacagcgactcctccaaccatttttttccggac
ggggtagatttcaaccctgacttgctgaacagtcagagccagagtggttttggggaggaa
tactttgatgagagcagtcagagcggagacactgatgatttcaagggctatggcccccag
gctctaactaatttaggggtgcaagtcttgggggctgacgggggggaaaataaatttaag
gggagtgctccatccgatacggtggattttagtattattgcagctgccagcaaagcactg
gggtcctctgacatcatggagcaccacagtggaggtcagagccctttgctgaacacgggg
gatttaggaaaagagaagtctcagaaacgggtaaaggaaggcaatggctctggaagtgcc
atggcaggtgccgggatagatgggaagccagggaagcgcagccggacgccgtccagcgat
ggcaaaagcaaagagaaacttccgaagcggaagaagcaggagacggatgggaaatctccg
tcccacagttcatccaacaggcccttcacgccgccagcgagcacaggtgggtccaaatct
ccggggagttcgggcagatcccagactcctcccggggtagccactcctcctattccaaaa
ataaccattcagatcccaaaaggaacagtgactgttggcaaaccgtcttcacacggccag
tacacgagtagtggctccgtcacctcctccagcagcaaaagccatcatagccattcttcc
tcctcctcctcttcttcctcctcttcaacctcaggcaaaattaaaagcaaatcagaaggg
tcttctggctcaaagatgagcagcagcctgtactccagccaaggcggctccgggtcgggt
cagtccaagggctcggcccagtcggtgggaaagccggggtcctcccccatcaccaagcac
ggcctcagcaccggctctggcagcaccaagatgaaacctcaaggaaagccatcgtccctc
atgaacccttccatgagcaaaccaaacatctccccgtcccactcgagaccctcggggggt
tctgacaaactcgcctctcccatgaaacccgtcccgggtactcccccgtcgtctaaagcg
aagtcgcccatcggttcaggctctggtgggtcccacatgtctggggctggatcgagctcg
agcatgaaatcgtcttcaggaatgggatcctccgggtctatgtcacagaaaccgcctccc
tcgtccaattcctccacggcgtcttcatcttccttttcgtccagcgggtcttccatgtct
tcatcccagaaccagcatggaagctccaaaggcaagtccccgagcagaaacaagaagcca
tcgctgacggcggtcatagacaagctgaagcacggggtggtcacgagcgggcccggcgga
gacgaccccatggatggacagatggggcccagttccaattcctcaagccatacgatgtcc
tccaaacacaacatgtctggaggggagttccagggaaagcgggagaagagcgacaaggag
aaatcgaaggtctccgtgtctggaggatccgtcgactcttccaagaagaactcggattcc
aaaaacgtcggaagcactggagtggccaaaattatcatcagcaaacatgatggtggttcc
cctagcattaaagccaaagtaactctgcaaaaacccggggaaggaggcggggacggcctg
aggcctcagatggcttcttccaaaagctacggctcgcccctgatcagcggctccacgccc
aaacacgagcgctgctcccccagccacagcaaatccccagcctacaccccccagaacatc
gacagcgagagcgagtcgggctcttccatcgccgagaaatcctaccagaacagccccagc
tccgacgacggcatccggcccctgcccgagtacagcgccgagaagcacaagaagcacaaa
aaggagaagaagaaagtgaaagacaaagaccgggacagagagagggagcgggataaggac
agggacaagaagaaatcccacggcgtgaagcccgagagctggtccaagtctccgatctcg
gcggatcagtctctgtccatggcgagcaacgccatcctctcggccgagcggccgtcccgc
gccagccccgagttcctgatcggggaggaagatgatgatctcatggatgttgctttaatt
ggcaattaa
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integrated database retrieval system
