Lonchura striata domestica (Bengalese finch): 110471950
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Entry
110471950 CDS
T05897
Symbol
MSI2
Name
(RefSeq) RNA-binding protein Musashi homolog 2 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110471950 (MSI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110471950 (MSI2)
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
110471950 (MSI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
110471950
NCBI-ProteinID:
XP_021388690
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All DBs
Position
19:complement(10260435..10463450)
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AA seq
444 aa
AA seq
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MEADGSQATSGSPGEAQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADPASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLGYPNFVATYGRGYPGFAPSYSYQ
FPGFPAAAYGPVAAAAVAAARGSGRGARGRANPQSAGSVLNSYSAQPNFGAPASPAGSNP
ARPGGFPGANSPGPVADLYGTASQDSGVGNYISAASPQPGSGFGHGIAVSTGGSGCARGC
ACGVVVAPRPRGSSLPEPGTCQLGALIIQLQPSRLEKAPESPSPAFDRSALVSLVSQLAA
FPAMGTPPLPLPGINHSHTEEILS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgggagccaggctacctcggggagccccggagaggcgcagcacgacccc
ggcaagatgttcatcggcggcctcagctggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaattagggagtgtatggtcatgcgggaccccaccaccaagcgc
tccagaggcttcgggttcgttacgttcgcggatccggcgagtgtagacaaagtcctggct
cagccgcaccacgagctggactccaagacgattgaccctaaagttgcgtttccccgacga
gcacagcccaagatggtcacaagaacaaagaaaatatttgtaggtggattatcggctaat
acagtagtggaagatgtgaagcaatactttgaacagtttggcaaggtagaggatgccatg
ctaatgtttgacaagacgaccaacaggcatagaggatttggcttcgtaacctttgaaaat
gaagacgtggttgaaaaagtctgtgaaattcatttccacgaaatcaataataaaatggta
gaatgtaagaaagcacaacctaaagaagtgatgtttccaccagggacgagaggaagggca
cgtgggttgccgtacaccatggacgctttcatgctagggatgggaatgttgggttacccg
aattttgttgcaacgtatggccgaggatatcctggatttgccccaagttacagttatcag
ttcccaggttttcctgcagcggcttatggaccagtagcagcggcagccgtggcggcagca
agaggatcaggtaggggggcccgtggaagagcaaaccctcagagtgcagggtcagtcttg
aatagctacagtgctcaaccgaattttggcgcacccgcttccccggcaggctccaaccca
gcgcggcccggaggcttccccggggccaacagccccgggcccgtcgcggatctctacggc
acggccagccaggactccggcgtgggtaactacataagcgccgccagcccgcagccgggc
tccggcttcggacacggcatcgccgtaagtaccggcggctcgggctgcgcgaggggctgc
gcgtgtggggtggtggtggccccgcggccgcggggctcctcgctgccggaacctgggacc
tgccagctcggggcgctgattatccagctgcaaccgtcaaggttggaaaaagctccggaa
tcaccgagtccagcctttgaccgctcggcccttgtgagccttgtatcacaacttgccgcg
ttcccagcgatggggactccaccactgccccttccagggattaatcactctcacactgaa
gaaattctgtcctaa
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