KEGG   Lonchura striata (white-rumped munia): 110472060
Entry
110472060         CDS       T05897                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03420  Nucleotide excision repair
lsr04115  p53 signaling pathway
lsr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110472060 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110472060 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    110472060 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lsr04121]
    110472060 (DDB2)
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110472060 (DDB2)
Ubiquitin system [BR:lsr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110472060 (DDB2)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110472060 (DDB2)
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd WD40_RFWD3 PEP5_VPS11_N Beta-prop_Vps41 NBCH_WD40 Frtz
Other DBs
NCBI-GeneID: 110472060
NCBI-ProteinID: XP_021389004
LinkDB
Position
5:38953078..38966387
AA seq 463 aa
MAPVNQPKDKKRERACQHWSEEAKSAGKRKRDYGERGNEKQEKKLFVRKASRPSGKIGCS
GGGFVMRNKRVLSSQLERRCSIVHYVYQKMLGGSMQAQLRQRLELAFVRSLSSYCLFRRA
SPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLAKTCFIKGKGPGDSLGDIKFSPY
EAEKLYVASGDGTLSLQDLEGRAVQVISRALDCGHEHHNVCCWYCSVDVSASCRAVVTGD
NVGNVVLLSTSGEEVWKLKLHKKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKTN
FLHLLPHEKPVNAAYFSPTHGAKLLSTDQHNEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVVGRYPDPKFPGYTLNELRTVDVFDGNTGEMVCQLYDPNASGIISLNK
FNPMGDTLASGMGFNILIWNQEEMAAKKHEHLLKAMTNEEIEP
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggctccagtaaaccagccaaaggacaagaagcgtgagagggcatgtcagcattggtca
gaagaagcaaaatcagctgggaagaggaaacgggactatggagaacgagggaatgagaaa
caagaaaagaagttgtttgtgagaaaagcatctagaccctcagggaaaatcggttgcagt
ggaggtggatttgtgatgagaaacaagagagtcctttcctctcagctggagcggcgatgc
agcattgttcattatgtctaccagaaaatgctgggaggctctatgcaagcacagctcagg
cagagattggagctggcttttgtgcgttctctttcctcatactgcctctttcgaagagca
agtccttttgacaggagagtgacatgtctggaatggcacccaacacaccccagtacacta
gctgtcggttccaaaggtggagacataatcctttgggattgtgaagtacttgctaaaacc
tgcttcataaaggggaaagggccaggagattctctcggagacatcaagttcagtccttat
gaggcagagaagctttatgtggcatcaggtgatggcaccctaagtctgcaggatcttgag
ggcagagcggtgcaggtgatctctcgtgccctggactgtggccatgagcatcataatgtt
tgttgctggtactgcagtgtggacgtttctgcaagctgccgtgcagtggtgacaggtgat
aatgtgggcaacgtggtcctactcagcacttctggtgaagaggtctggaaactgaaattg
cataagaagaaagtgactcatgtagaatttaactcccgatgtgagtggatgtttgccaca
gcatctgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaacaaaacaaac
tttcttcatctgcttccacatgagaaacctgtcaatgcagcttacttcagcccaacacat
ggtgccaagcttctgagcacagaccagcacaatgaaatcagggtttactcatcttcagac
tggaccaagccgcagcatctgattccacatccacataggcagtttcagcacctcacacct
attaaggcaacgtggcatcctcgctatgacctcattgtcgtaggtcgctacccagacccc
aagttccctgggtacacgctgaacgagctgcgaactgtggatgtgtttgatggcaacacc
ggcgagatggtttgtcagctctacgatccaaatgcttctgggatcatctcgctcaataaa
tttaaccctatgggagacacactggcctctggcatgggctttaatattctgatctggaac
caggaggagatggcagccaagaagcatgaacatctcttgaaagccatgacaaatgaggag
attgaaccatga

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