Lonchura striata (white-rumped munia): 110472074
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Entry
110472074 CDS
T05897
Symbol
AMBRA1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr04137
Mitophagy - animal
lsr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110472074 (AMBRA1)
04137 Mitophagy - animal
110472074 (AMBRA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110472074 (AMBRA1)
03029 Mitochondrial biogenesis [BR:
lsr03029
]
110472074 (AMBRA1)
Membrane trafficking [BR:
lsr04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110472074 (AMBRA1)
Mitochondrial biogenesis [BR:
lsr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
110472074 (AMBRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
eIF2A
WD40_MABP1-WDR62_2nd
PRIMA1
TAZ1_RBM
Motif
Other DBs
NCBI-GeneID:
110472074
NCBI-ProteinID:
XP_021389060
LinkDB
All DBs
Position
5:complement(38474194..38598356)
Genome browser
AA seq
1300 aa
AA seq
DB search
MKVVPEKNAVRILWGRERGTQALGAQRLLQELVEDKTRWMKWEGKKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCVHSLVGHRRTPWCVTFHPTIPGLIASGCLDGEV
RIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHYLLTAIVNPSNQQSDEEVEISVDSTEMPHYRQRAILPSQPVRRTPLL
HNFLHMLSSRSSGIQVGEQNSVQDSATPSPPPPPPPPPPPPASENTRASVYNRLRERVSY
PTAECCQHLGMLCLCSRCSSTRLPSSLFPHQENAPSTSSGATGTSFSSVQTEPYQPPEQA
SVAQEEQGILNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLSGSLAGHQSRYQQSAREMAS
GLGGSDWSRTVLNMSSRSELEAMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGF
LAPGAEVNSGSSAGPSNPASIRNELQCDLRRFFLEYDRLQELDQGIGGEPSQSQQAQEML
NNNIEPDRPGPSHQQTAQSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERSTPSYTPG
QVQSTFEGVPPHTSQVQPAERTEGRAPASSRLQLGSSSTPQEERTVGVVFNQETGHWERV
YSQSASSRPGNVSQEALNQEMPEESSEEDSLRRRLLESSLISLSRYDGAGSREHPIYPDP
ARLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSSSSASTSENSSPSVEGNDLEFE
DFERDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVN
RVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNCKIYNDASCD
ISADGQLLAAFIPSSQRGFPDEGILAVYSLAPHNLGEMLYTKRFGPNAISVSLSPMGRYV
MVGLASRRILLHPTTEHMVAQVFRLQQPHGGETSMRRVFNVLYPMPADQRRHVSINSARW
LPEPGLGLAYGTNKGDLVICRPEALNSGVEYHWDQLNENVFTVHSSSRSERPGTSRATWR
TDRDMGLMNAIGLQPRNPPTSVTSQGTQTLAPQLQNAETQTEREVQEQESASAGTGEGEG
PEYGASGEDALSRIQRLMAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRSSQTGTE
PTGAEGTSAQQPTSQQLGTELEGRILSESVQLPERGPSPRTAPSGSEGQSAGDLDLPEQA
QSSMDTEGPIEYSDLTNNNHLPDSTNFYSNDSTSGESRNR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgtcccagagaagaatgctgtccgcatcctttggggtagggaacggggcacc
caagccttgggtgctcagcggcttctgcaggagctggtggaggataaaactcgatggatg
aaatgggagggcaagaaagttgagttaccagacagtccacgctccaccttcttgctggcg
tttagtccagacaggaccctaatggcttccacacatgtgaaccacaacatctacatcaca
gaggtgaaaacgggcaaatgtgttcattccttggttggacatcgccgtactccctggtgt
gtcaccttccatcccaccatcccaggcctcattgcttcaggatgcctagatggggaggtt
agaatttgggatttacatggtggaagtgagagctggttcacagatagcaacaatgccatt
gcatcacttgcttttcatcctacggctcagctcttattgattgccactgccaatgagata
catttctgggactggagtcgtcgggagccttttgcagtggtgaaaacagccagtgaaatg
gagcgggtcaggctggtacggtttgatcccttgggacactacttgctcacagcgatagtt
aacccttctaaccagcagagcgatgaggaagtggaaatctccgtggacagcacagagatg
ccgcattatcgtcagcgcgctatccttccgtctcagcctgtgaggcgcacacccctcctc
cacaacttcctgcatatgttgtcctcccgctcctctggcatacaggtgggagagcaaaac
agtgttcaagactctgctaccccatcccctccaccgcctccaccaccaccacctccgcct
ccagccagtgagaacacaagggcatctgtctataacaggctccgggagcgagtcagctat
cccacagcagagtgctgccagcacctggggatgttgtgcctttgcagccgatgctctagt
acaagacttccttcttctctcttcccacaccaggaaaacgcaccctccacgtcttctggg
gccactggcacttccttctcctctgtgcagacagagccttatcaacccccagagcaggca
tccgtagcgcaggaggagcaggggatacttaacaggccctctgctttcagcacagttcag
agcagcactgctggcaacaccctgcgcaaccttagcctgggccccacacggcggtccctc
agcgggtccttggcaggccaccagtcccggtaccaacagtctgcgagagagatggcttca
ggcttgggtgggtctgactggtccaggacagtgctgaacatgagctctcggtccgagctg
gaagccatgcctccccctaggaccagtgcctcctctgtgagcttgctgtccgtgctcaga
cagcaggagggaggttcccaggcatcagtctatacctctgcaacagaagggaggggcttt
ctggccccaggggctgaggtgaacagtggtagtagtgctggcccaagcaatccagccagc
attcgtaatgagctccagtgtgatttgaggcgattcttcctggaatatgaccggcttcag
gagttagatcaggggattggtggggagcctagccagtcgcaacaggctcaagaaatgctc
aacaacaacattgagcctgatcgacccggtccctcccatcagcagactgcacaaagcagt
gaaaacaattccaatttgtcccggggtcacctgaaccgctgtcgtgcttgtcataacctg
ctgacctttaacaatgacacgctgcgctgggaaagaagcacgcctagctacacaccaggg
caggtccaaagcacatttgagggtgtgcctccacataccagccaggtgcagcctgcagag
agaaccgagggcagagctcctgcctctagcagactgcagctgggcagctcttccaccccg
caggaggagaggaccgtgggagtggtctttaaccaggagacggggcactgggaaagagtt
tacagccagtcggcttcaagcagacctgggaatgtatcacaggaggccttaaaccaggaa
atgcctgaggaaagctcagaggaggattcactcaggaggaggttgctggagtcttccctc
atttcgttatctcgctatgatggagcaggatcccgggaacatccaatctacccagatcca
gccaggttgtctcctgctgcatattacgcccagaggatgatccagtatctttcccggagg
gacagtattcgacagcgctctatgcgatatcagcaaaaccgtctccgctcttcctcctcc
tctgcttccacttcagagaactcaagcccatctgtggagggaaatgatctggaatttgaa
gattttgaaagggacaatggagaccgatccaggcaccgagctccccggaatgcccgcatg
tctgcaccatcactggggcgctttgtcccaagacgcttcttgctgccagaatacttgcct
tatgctgggattttccatgaacgagggcagcctggcttggccacccattcctctgtcaac
agggtcttggcaggtgctgtgattggggatggacagtcagctgtggccagcaacattgcc
aacaccacctaccggctccagtggtgggacttcactaagtttgatctgcctgaaatcagc
aatgcctctgtgaatgtgcttgttcaaaactgcaagatttacaatgatgctagctgtgat
atctctgctgatgggcagctgctggcagccttcattcccagcagtcagagaggcttccct
gatgaaggaatactggctgtatattctctggcaccccacaacttgggcgaaatgctttac
acaaagcgatttggacctaatgccatttctgtgagcctgtctccaatgggcaggtatgtt
atggtgggactggcttcccgacgtatcctgttgcaccccactacagaacacatggttgct
caagttttcaggctgcaacagccccatggtggagaaacatctatgaggagagttttcaac
gttctgtacccaatgcctgccgaccagaggagacatgtcagcataaactctgctcgctgg
ctgcctgagccgggcctgggattggcatatggcaccaacaaaggggacctggtgatttgc
cggccagaggccttaaactctggagttgagtaccactgggaccagctgaatgagaatgtc
ttcactgtgcattccagcagtaggagtgagcggcccggaaccagcagagctacatggagg
acagacagggacatgggcctgatgaatgccataggcctacaaccccgaaatccccccacc
tctgtgacatcacagggtacccagaccttggcgcctcagctgcagaatgccgagactcag
acagagagggaggtacaggagcaggaatctgcctctgcagggactggtgaaggtgaaggt
ccagaatatggggccagtggggaggatgccctgagcaggattcaaaggctgatggcagaa
ggtggcatgactgctgtggttcagcgggagcagagcaccaccatggcgtccatgggcggc
tttggcaacaacatcattgtgagccaccggatccaccgcagctctcagactggcacagag
cccactggggctgagggcacgtcagcacagcagcccacctctcagcagctgggcacagag
ctggagggacggatcctgtcagagtctgtgcagctgccggagcgtggcccgagcccgcgg
acagcccctagtgggagcgaaggacaaagcgctggtgacctggatctgcctgagcaggcc
cagtcctccatggacaccgagggaccaattgaatacagtgacctaactaacaataaccat
cttcctgacagtaccaacttctatagtaatgatagcaccagtggggagtcgcggaacagg
tag
DBGET
integrated database retrieval system
