Lonchura striata domestica (Bengalese finch): 110472120
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Entry
110472120 CDS
T05897
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110472120 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110472120 (CAPN3)
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
110472120 (CAPN3)
Peptidases and inhibitors [BR:
lsr01002
]
Cysteine peptidases
Family C2: calpain family
110472120 (CAPN3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
Acid_phosphat_B
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
110472120
NCBI-ProteinID:
XP_021389183
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All DBs
Position
5:complement(36161983..36188388)
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AA seq
851 aa
AA seq
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MPTAINAVVAQQTAAGSIPSTAAGTTEGAGGGTGGIYSAIISRNQPIIHVKEKTYEELHK
KCLEKNILYEDPDFPPNESSLFYSQKSPVKFEWKRPREICENPRFIIGGANRTDICQGEL
GNCWFLAAIACLTLNKKLLCRVIPHDQSFIQNYAGIFHFQFWRYGNWVDVVIDDCLPTYN
NQLVFTKSSQRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEIKDAPK
DIYKIMKHAIDRGSLMASSIDDDLGFSYGSAPRSNIGELIARMVKNQENAQMTQSTVDYQ
GMEERPAWTIVPMQYETRMSCGLVKGHAYSVTAVEETVFKGEKIRLVRLRNPWGQVEWNG
AWSDKSEEWDSVNEAEKIRLQHKVVEDGEFWISFQDFMRHFTKLEICNLTPDTLEVDKFQ
TWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLKLLEEDDDPEDEEVICSFLVALMQK
NRRKERKLGANLYTIGFAIYEVPKEMHGTKHHLQKDFFLYNASKARSKTYINMREISERF
RLPPSEYVIIPSTYDPHQEGEFILRVFSEKRSLSEEVENMIEAEHPLKKKGKPIIFVSDR
ANSNKELTTDENAGKDGEKTQADEKKRSSTKAHEESEEQKQFRNIFRQIAGDDMEINAEE
LRNVLNNVVKKHKDLRSEGFELESCRSMIALMDTDGSGKINFDEFRHLWDKIKSWQKIFK
RYDTDHSGTINSYEMRNAVNDAGFRLNNQLYDIITMRYADKNMNIDFDSFICCFVRLDAM
FREWLPRCHGPTPSCPQTQPWIHGTHWDEKDLKDDLVPTPMPWAGTPCPGPDCSEPITLT
AKFVHSTTAPM
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgccatcaatgcagtggtggctcagcaaacggctgctgggtcgatccccagc
accgctgctggcactacggagggggcaggagggggcacagggggcatttattctgccatt
ataagtcgcaatcagcccattatccatgtaaaggagaagacctatgaagagcttcacaag
aagtgcctggagaaaaacattctctatgaagatcctgatttcccaccaaatgagtcgtcc
cttttctacagccagaaaagccccgtcaagttcgaatggaaaagaccacgtgaaatctgt
gagaatccacggtttattattggtggagccaatagaacagatatctgccaaggagaatta
ggtaactgctggtttctggctgccattgcttgcctgacactgaataaaaaactactctgt
agagtcatacctcacgaccagtcctttatacaaaactatgctggcatctttcacttccag
ttctggcgctatggaaactgggtggacgtcgtcatcgatgactgcttacccacctacaac
aaccagctggtctttaccaagtcctcccagcgcaacgagttctggagcgccctcctggag
aaggcctatgcaaaactccatgggtcatatgaagctttgaagggaggcaacaccactgaa
gctatggaggacttcactggaggagtcacagagttctatgagataaaggatgcccctaaa
gatatctataaaatcatgaaacatgccattgacagaggatccctcatggccagctccatt
gatgatgacctaggtttttcgtatggatcagctcctcggagcaacattggggaactgatt
gctcgcatggtgaagaatcaagaaaatgcacagatgactcagtccactgtagactaccag
gggatggaggagaggccagcctggaccatagtgccgatgcagtacgagacacggatgtcc
tgcgggctcgtcaaggggcacgcctactccgtgacggccgtggaagagacagtatttaaa
ggtgaaaaaatacgtctggtaaggctgagaaacccctggggccaggtggaatggaatgga
gcctggagtgacaagtcagaagagtgggactctgttaatgaagcagagaaaatccgcttg
cagcacaaggtcgtggaggatggggagttctggatatcatttcaagatttcatgaggcac
ttcacaaagcttgagatctgtaacctcacacctgatactctggaagtggataaattccag
acctggactgtgtcagtcaacgaaggacgctgggtgagaggctgctcagctggaggttgc
cgcaattatccagatacattttggaccaatccccagtatcgcctgaagctcctggaggaa
gatgatgatcctgaggatgaagaggttatctgcagcttccttgttgcactgatgcagaaa
aacaggaggaaagagcgcaagctgggagccaacctgtacaccattggctttgccatctat
gaggtgcccaaagagatgcatggtactaagcaccacttgcagaaggattttttcctctac
aatgcctccaaagctagaagtaagacctacataaacatgcgagaaatctctgagcgcttc
cggttacctcccagcgagtacgtcatcatcccatcgacatatgaccctcaccaggaggga
gaattcatcctcagggtcttctcagagaaaagaagtctttcagaggaggttgaaaatatg
attgaggcagaacatccattgaagaaaaagggcaagcctatcatcttcgtttctgacaga
gcaaacagcaataaggagctgacaacagatgaaaatgctggcaaagatggtgaaaaaacc
caagcagatgagaaaaagcgttcttcaacaaaagctcatgaggagagtgaagagcaaaaa
cagttcaggaatattttccgacagattgcaggggatgacatggagatcaatgctgaggaa
cttaggaatgttctcaataatgtcgtaaaaaaacataaggacctaaggtcagaagggttt
gaattggaatcctgccgcagcatgattgctctaatggatacagatggctcagggaagata
aactttgatgaatttcgacatctctgggacaagattaaaagctggcagaaaattttcaag
cgttatgacacggatcattcaggaaccattaacagctatgagatgcgcaacgcagtcaat
gatgcagggtttcggctgaacaaccagctctacgacatcatcaccatgcgctacgccgac
aagaacatgaacatcgacttcgacagcttcatctgctgcttcgtgcgcctggacgccatg
ttccgtgagtggctgccccggtgccatggccctaccccctcctgcccccagacacagcca
tggatccacgggacacactgggatgaaaaggacctcaaggatgacctggttccaaccccc
atgccgtgggcagggacgccttgccctggcccagattgctcagaacccatcacactcact
gcaaaatttgttcacagcactactgcccctatgtag
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