Lonchura striata domestica (Bengalese finch): 110472140
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Entry
110472140 CDS
T05897
Symbol
RBM25
Name
(RefSeq) RNA-binding protein 25 isoform X1
KO
K12822
RNA-binding protein 25
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110472140 (RBM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsr03041
]
110472140 (RBM25)
Spliceosome [BR:
lsr03041
]
Complex A
U1 snRNP components
U1 related factors
110472140 (RBM25)
Complex B
110472140 (RBM25)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
110472140
NCBI-ProteinID:
XP_021389254
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All DBs
Position
5:35410277..35442826
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AA seq
838 aa
AA seq
DB search
MSFPPHLNRPPMGIPTLPPGIPPPQFPGFPPPVPPGTPMIPVPMGIMAPAPTVLVPTTVS
MVGKHLGVRKDHPGLKNKENDENCGPTTTVFVGNISEKASDMLIRQLLAKCGLVLSWKRV
QGASGKLQAFGFCEYKEPDSTLRALRLLHDLQIGEKKLLVKVDAKTKAQLDEWKAKKKAS
NGNSRPETTNDDDEALDEETKRRDQIIKGAIEVLIREYSSELNAPSQESDSHPRKKKKEK
KEDIFRRFPVAPLIPYPLITKEDINAIEMEEDKRDLISREISKFRDTHKKLEEEKGKKEK
ERQEIEKERRERERERERERERREREREREREREKEKERERERERDRDRDRTKDRDRDRE
RDRDRDRDRERSSDRKDRSRSREKSRDRERERERERERERERERERERERERERERERER
EKDKKRDREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKSREYEKEAEREEER
RREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEE
IRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEEEDKAEKEEKREEPEEEEE
EPEQKPCLKPTLRPISSAPSVSSASGNATPNTPGDESPCGIIIPHENSPEQQQLEEHRPK
IGLSLKLGACNSPNQPNAVKRKKLAVDSVFNKFDDEDSDDVPRKRKLVPLDYGEEDKSNI
KGSVNTEEKRKHIKSLIEKIPTAKPELFAYPLDWSIVDSTLMERRIRPWINKKIIEYIGE
EEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccacctcatttgaatcgccctcctatgggaatcccaacacttccccctggg
atcccacctccgcagtttcctggttttcctccacctgtacctcctgggacccctatgatt
cctgtaccaatgggcattatggctcctgctccaactgtgttagttcctaccacggtgtct
atggttggaaaacacttgggagtcagaaaagaccatcctggcttaaagaacaaagaaaat
gatgaaaactgtggtcccactactactgtttttgtaggcaacatttcagagaaggcctca
gacatgctcatacggcagcttctggcaaaatgtggtttggttttgagttggaagagagtg
cagggggcatctggaaaacttcaagcctttggattttgtgagtacaaagagccagattct
accctacgagcactgagactactccatgacctccagattggagagaagaagctgctggtc
aaagttgatgcaaagacaaaggctcagctagatgaatggaaagcaaagaaaaaggcatct
aatgggaactccagaccagagacaacaaatgatgatgatgaagcactggatgaggaaacg
aagagaagagatcagataattaaaggggccattgaagtgttaatacgagaatattccagc
gagctcaatgccccctcccaggaatctgactctcaccccaggaagaagaaaaaggaaaag
aaggaggacattttccgcagatttccagtggccccactgataccttatccactcatcacc
aaggaggatataaatgctatagaaatggaggaagacaaaagagacctgatatcaagagag
atcagtaaattcagagacacacacaagaaactggaggaggaaaaaggcaaaaaggagaaa
gaaagacaggaaattgaaaaagaacgcagagaaagagaaagggaacgggagcgtgaacga
gaaaggagggagcgtgaaagagagagggaacgtgaacgagagaaggagaaggaacgggag
cgtgaacgggagcgagatagggaccgtgaccgaactaaggaccgagacagagaccgcgaa
cgagacagagatcgtgaccgagatcgtgaaaggagttcagatcgcaaggataggagcaga
tcaagagaaaaaagcagagacagggaaagagaacgagaacgcgagagagaaagagaacga
gaacgcgagagggaacgggaaagagaacgggaacgggaaagagagcgagaaagagagagg
gaaaaggataagaagagagaccgagaagaagatgaagaagatgcctacgaacgacgaaaa
ctggagaggaaactgcgtgaaaaggaagctgcatatcaagagcgtcttaaaaactgggaa
atcagagaacgaaaaaaaagtcgagaatatgaaaaagaagctgagagggaagaagaaaga
agacgggaaatggcaaaggaagccaaacggttgaaagaattcttagaagattatgatgat
gacagagatgatccaaaatactacaggggtagtgctcttcagaagaggctaagagacagg
gagaaagagatggaagcagatgaacgagacaggaaaagggaaaaggaagaattagaagaa
attaggcagcgtcttctggccgaaggacatccagatccagatgcagaactccagaggatg
gagcaggaggctgagcggcgtaggcagccacaaataaaacaagagccagaatctgaggag
gaagaggaagacaaggcagaaaaagaagaaaaaagagaagagccagaggaagaggaggag
gagcctgaacaaaagccctgccttaaaccaactttacgacccatcagttctgctccttct
gtttcttcagctagtggaaacgcaactcctaacacacctggtgatgaatctccctgtggc
attattatccctcatgaaaattcacctgaacaacaacagctggaggagcatcggcccaaa
ataggactcagcctcaaattgggtgcctgtaacagtcctaatcagcccaatgctgtaaaa
aggaagaaacttgctgtggatagtgttttcaataaattcgatgatgaagacagcgatgat
gtgccccggaaaaggaaacttgttcccctggattatggagaagaagataaaagcaatatc
aaaggcagtgtcaatacagaagaaaagcgcaagcacattaagagtctcattgagaagata
cccacagcaaaaccagagctctttgcttatcctcttgactggtcaattgtggattcgaca
ctaatggaacgtcgaattagaccatggattaacaagaaaataatagaatatattggtgaa
gaagaagccacactagttgactttgtttgctctaaggttatggctcacagctcacctcag
agcatactggatgatgttgccatggtactagatgaagaagctgaagttttcatagtcaaa
atgtggaggttgttgatatatgagacagaagcaaagaagattggcctagtgaaataa
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