Lonchura striata (white-rumped munia): 110472179
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Entry
110472179 CDS
T05897
Symbol
ABCA2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr02010
ABC transporters
lsr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110472179 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110472179 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110472179 (ABCA2)
Transporters [BR:
lsr02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110472179 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
110472179
NCBI-ProteinID:
XP_021389305
LinkDB
All DBs
Position
17:6502028..6535877
Genome browser
AA seq
2509 aa
AA seq
DB search
MGFLHQLHLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTIPVKEVSFYTAA
PLTSAGILPVMQSLCPDGQRDEFGFLQYSNSTVTQILEHLSEAVEQSSLFDPQHPGLEEE
LESLRRHLEALSSPEPSSMETHFSSQAGSSFTLAWAAKDQGELRRFLMQNLSLPNSTTEL
LLGSSIDLREVYRQFFDSFPLVPDETRERDLWDEFGPSKKMTQLEKSLPSGWRSLQERVV
HRVLQDPVAAPHRPALLRMLSQALGLTSTAVAPAISDSPQAIVTEMENVLFTGPALEQVT
CEQYPGGLHRLLRVSPRQQPLLAAYRALACNGSRTIRQERFAQLASELQKQLDTPKIVSR
LKLEEVNSTATQHRLRALLEDLVEMEKVLQDMDILSALAKLLPRGACASKAVPPTANSTS
WASTNATAGNATAEEEESAGESLSGTDSRQGQFSAFVQLWAGLQPILCGNNRTIEPEALK
QGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPVGTEVDKVILKANETFAFVGNVTHYA
RAWLNISPEIRAYLEEGRLQRRIHWLQQLTADLHKHPEILNVSDSDVLHNFLNGNFSLPN
ASVLLQQLDTIDNAACGWVRFMAKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFASVIF
QTNRDGSLPPHVTYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMERA
LINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQHIVTE
KEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGRVLMHSDVLIIWLFL
AIYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCI
ASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMMMLVVDAMVYGVL
TWYIEAVHPGMFGLPRPWYFPFQKSYWLGNGRVETWEWTWPWSRNTRFSIMEEDQACAME
SRRLAEETRGIEEEPTHLPLVVCIDKLTKVYKTDKKLALNKLSLNLYENQVVSFLGHNGA
GKTTTMSILTGLFPPTSGSATIYGHDIRTEMDKIRKNLGMCPQHNVLFDRLTVEEHLWFY
SQLKSMAEEEIRKEMDKMIEDLELSNKRHCQVQTLSGGMKRKLSVAIAFVGGSRAVILDE
PTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFL
KSTYGDGYKLTVVKKQSDTRNGTEPGHSPLSHSSVSPCSEPRVSQFIKKYVASCLLISDT
NTELSYILPSEAVKKGCFERLFQHLEQNLEELDLTSFGLMDTTLEEVFLKVSEEDQSLEN
SDVDMKESKDTLQPPSSELGPKSEANGEPLAEAAVPEKPEVELSNLVTCSNLAQSQASLR
SVSSVGSVRGDEGGAYSEFFGDYAPLFDNRQDPDNISLQEQEAEVEAEDRDLAGRGSFKL
EGSWLKLRQFHGLIIKRFHCAKRNTKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLIL
SPSQYHNYTQPKGNFIPYANEERHEYRIRLSPDASPQQLVNTFHLPSGVGATCVLKTPFN
NTLDQPMQTLNLNSNESKMLAAKYFDAMCIDSFTQGLPLSNFVPPPPSPAPSDYPMSMDE
DLLHAWNSTTFSTVKGTVTSAPALPRIIHEPIKCTCSMQGTGFSCPSGVGGHPPQMKVVT
GDILTDITGRNVSEYLLYTSDRFRLHRYGALTFGNVQKSIPASFGARAPATVRKIAVRRT
AQVFYNNKGYHSMPTYLNALNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYL
LQGTDVVIAIFIIVAMSFVPASFVVFLVAEKATKAKHLQFVSGCDPVIYWLANYMWDMLN
YLVPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVF
LIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLVFPNYNLGHGLMEMAYNEYI
NEYYAKIGQFDKMKSPFEWDIVTRGLVAMTIEGFVGFFITIMCQYNFFRKPQRLPVSTKP
IEDDIDVANERHRVLRGDADNDMLKIENLTKVYKSRKIGRILAVDRLCVGVRPGECFGLL
GVNGAGKTTTFKMLTGDESTTGGEAFINGHSILKELLQVQQSLGYCPQFDALFDELTAQE
HLELYTRLRGIPWKDEERVVKWALKKLELTKYADKPASTYSGGNKRKLSTAIALIGYPAF
IFLDEPTTGMDPKARRFLWNLILDVIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLKCL
GSIQHLKNRFGDGYMITVRTKSSLNVKEVVRFFNRNFPEAVLKERHHTKAQYQLKSDQIS
LAQVFSKMEQVVDVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQETSPSSVLQSPLEHV
LSLLRPRTAPTELRALMVEEQEDLETDDEGLISFEEERAQLSFNTDTLC
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctgcatcagctccatcttctgctctggaagaacgtgacactgaaacggcgc
agcccgtgggtgctggccttcgagatcttcatccctctggtgctcttcttcatcctcctg
gggctgcggcagaagaagccaaccattcctgtgaaggaagtctctttctacacggcggcc
ccactcacatcagccgggatcctgccagtcatgcagtccctgtgccctgacggccagcgt
gatgagtttggctttctgcagtactccaactccacggtgacacagattctggagcacctc
agcgaggcagtagagcaaagcagcctcttcgacccacagcatccaggactggaggaggag
ctggagtcgctgcgccggcacctggaggccctcagcagccctgagcccagctccatggag
acccacttcagcagccaagcagggtctagcttcacactggcttgggcggccaaagaccag
ggtgagctgcgtcgcttcctgatgcagaacctctccctccccaacagcacaactgagctg
ctcctgggctccagtattgacctgcgggaggtgtaccggcagttttttgattcctttcct
ttggtacctgatgagacccgtgagcgagacctgtgggatgagtttggcccgagcaagaag
atgacacagctggagaagagtctacccagtggctggagaagcctgcaggaacgggtggtt
cacagggtgctgcaggacccagtggcagccccacaccgtccagcactgctccgcatgctc
tcccaggctctgggcctcaccagcactgctgtggcacctgccatctctgatagcccccag
gccattgtcaccgagatggagaatgtcctcttcactgggccagcgctggagcaggtgaca
tgtgagcagtacccagggggactgcaccgccttctgcgcgtgtcccccaggcagcagcca
ctgctggcagcataccgggcactggcctgcaatggcagccgaactatccgccaggagcgc
tttgcccagctggcctctgagctccagaagcagctggacacccccaagatagtcagcagg
ctgaagctggaggaagtgaacagcacagccacccagcaccgcctccgtgccctcctcgag
gacttggtggagatggagaaggttctccaggacatggacatcctctcagcactggctaag
ctgctgcccaggggagcctgtgccagcaaggctgtgccacccacggccaacagcaccagc
tgggccagcaccaatgccacggctggcaatgccacggcagaggaggaagagagcgctggg
gagagcctgtctggcactgacagccgccaggggcagttctcagcgttcgtgcagctctgg
gcggggctgcagcccatcctctgcgggaacaaccggaccattgagcctgaggcactaaag
cagggcaacatgagctcgctgggcttcaccagcaaggagcagcgaaacttgggcctcctt
gtgcatctgatgaccagcaaccccaaaatcctgtatgcacctgtgggcactgaagttgac
aaggtcatcctgaaggccaacgagaccttcgcctttgtgggcaatgtcacccactacgcc
agggcatggctgaacatctcccctgagatccgagcctacctggaggagggcaggctgcag
aggcgcatccactggctccagcagttgaccgctgacctccacaagcacccagagatcctg
aatgtctctgacagtgatgttctccacaactttctcaatggcaacttctccctgcccaat
gccagcgtcctgctccagcagctggataccattgacaatgctgcctgcggctgggtccgc
ttcatggccaaggtcagtgtggacatcttcaaaggcttcccagatgaagagagcattgtc
aactacacgctgaaccaagcctatcaggacaatgtcacggtctttgccagcgtcatcttc
cagactaacagggatggctcattgcctccccatgtcacatacaagatccgtcagaattcc
agcttcacagagaagaccaacgagatccggcgggcatattggcggcctggccccaacact
ggcggccgcttctacttcctctatggctttgtctggatccaggacatgatggagcgtgcc
ctcatcaacacatttgttggccacgatgtggtggagcctggcaactatgtacagatgttc
ccgtacccatgttatacccgagatgactttctctttgtcattgagcacatgatgcccctc
tgcatggtgatctcctgggtctattcagtggccatgatgattcagcacatcgtgacagag
aaggagcatcgcctgaaagaggtgatgaagatgatgggcctgaacaatgcggtgcactgg
gtggcttggttcatcactggctttgtccagctctccatctcagtcacggccctcactgcc
attctcaagtacggcagggtcttgatgcatagcgacgtcctcatcatatggctcttcctt
gccatctatgctgtggccaccatcatgttctgctttctggtgtcagtgctctactccaag
gccaagctggcctctgcctgtggaggcatcatttacttcctcagctatgtgccctacatg
tatgtggccatccgggaggaggtagcccatgacaagatcacggcctttgagaagtgcatt
gcgtccctcatgtccaccacggcctttgggttgggctccaagtactttgcgctgtatgag
gtggctggtgtgggtatccagtggcacaccttcagccagtcacctgtggaaggagatgac
ttcaacctcctgctgtccatgatgatgctggtcgtggatgccatggtgtatggggtgctt
acgtggtacatcgaggctgtgcacccgggcatgttcggcctgccacggccctggtacttc
cctttccagaagtcttattggctgggcaatgggcgcgtggagacctgggagtggacctgg
ccatggtcacgcaacacccgcttcagcatcatggaggaggatcaggcctgtgccatggaa
agccggaggctggcagaggagacaaggggcatcgaggaggagccaacccacctcccctta
gtcgtctgcattgacaagctcaccaaagtctacaagacagacaagaagctggcgctaaac
aagctgagcctcaacctctacgagaaccaggttgtgtccttcctggggcacaatggtgca
ggcaagaccaccaccatgtccatcctcactggcttgttccctccaacatcgggctctgct
accatctatggccatgatatccgtacggagatggacaagatccggaagaacctcggcatg
tgtccccagcataatgtgctctttgacaggctgacagtggaggagcatctctggttctac
tcacagctcaagagcatggcggaggaggagatccgcaaggagatggacaagatgatcgag
gacctggaactctccaacaaacggcactgccaggtgcagactctctcaggcggcatgaag
aggaagctgtcggtggccattgcctttgtgggtgggtcgcgggcggttatcttggatgag
cccacagctggtgtagacccatatgcccgaagggccatctgggacctcatcctcaagtac
aagccagggaggaccatcttgctctccacacaccacatggatgaggctgacctgctgggg
gaccgcatcgccatcatctcccatggcaagctcaagtgctgtggttccccgctgttcctc
aagagcacctatggtgatggctacaagctgacggtggtgaagaagcagtcagacaccagg
aatggcacagagccaggccacagccccctgagccactcctctgtcagcccctgctctgag
cctcgtgtctcccagttcatcaagaagtatgtggcctcctgcctcctcatctcagacacc
aacacagagctctcctacatcctgcccagtgaggctgtcaagaagggctgttttgagaga
ctcttccagcacttggagcagaacctggaagagctggacctcaccagttttgggctgatg
gacaccacgctggaggaggtcttcctgaaggtgtctgaggaagaccagtctctggagaac
agtgacgtggacatgaaggagtccaaggataccctgcaaccaccttcttctgagctgggt
ccaaagtctgaagccaacggggagcccctggctgaagcggccgtgccagagaagcccgag
gtggagctcagcaacctggtgacctgctccaatctggcgcagtcgcaggcatccctgcgc
tcagtgtcctcggtggggtctgtgcgtggtgatgaaggtggggcttattctgaattcttt
ggggattatgcgcccctgttcgataaccggcaagaccccgataacatcagtctgcaagag
caagaagcagaggtggaagcagaggaccgtgacctggcaggtcggggaagcttcaagctg
gaaggctcatggctgaagctgcgccagttccatgggctgatcatcaaacgcttccactgt
gccaagcgcaacaccaaggccctcttctcacagatcctcctgcctgccttttttgtctgt
gtggccatgactgtggcgctctccgtgcccgaaataggtgacctgccacccctcatcctc
tcgccatcccaataccacaactacactcagcccaagggcaacttcattccttatgccaac
gaggagcggcatgagtaccgcattaggctgtctcccgatgccagccctcagcagctggtg
aacactttccatctgccctctggtgtgggggccacctgtgtgctcaagacaccctttaac
aacacactggaccagcccatgcagaccctcaacctcaatagcaatgagtccaaaatgctg
gcagccaagtacttcgatgccatgtgcatcgactccttcacccagggccttccgctctcc
aactttgtgccaccacctccatccccggctccctctgactaccccatgtcaatggatgag
gacctgctccatgcctggaactctacaaccttctccactgttaaagggactgtgacctca
gcccctgccctgccccgcatcatccatgagcccatcaagtgcacatgctccatgcagggc
accggcttttcctgccctagtggcgtggggggccatcccccacagatgaaggtggtgaca
ggggacatcctgacagacatcacagggcgcaacgtctctgaatatctgctctacacctcg
gaccgcttccggctgcacaggtatggggcgctcacgtttggaaacgtccagaaatccatc
ccggcctcctttggagccagggctccggccacagtgcgcaagattgctgtgcgcagaaca
gctcaggttttctacaacaacaagggctaccacagcatgcccacttacctcaatgccctc
aataacgccatcctgagagccaacctgcccaagagcaagggcaaccctgctgcctacggc
atcacagtcaccaatcaccccatgaacaaaacgagtgccagcctgtccctggattacctc
ctgcaaggcacagatgtggtgattgccatcttcatcattgtggccatgtccttcgtccca
gccagctttgtggtattcctggtggctgaaaaggccaccaaggccaaacacctgcagttt
gtgagcggctgtgaccctgtcatctactggttggccaactacatgtgggacatgctaaac
tacctggtgccagccacgtgctgcatcatcatcctgttcgtgtttgacctcccagcatat
acctctcccaccaacttccccgctgtcctctccctcttcctgctctatggctggtccatc
acccctatcatgtacccggcctccttctggtttgaggtgcccagctctgcttatgtcttc
ctcattgtcatcaacctcttcattggcatcacagccactgtcgccacgttcctgctgcag
ctctttgagcacgacaaggacctgaaggtggtaaacagctacctgaagagctgcttcctt
gtgttccctaactacaacctgggccatggcctgatggagatggcctacaatgaatacatc
aatgagtactatgccaaaattgggcagtttgataaaatgaaatcaccctttgaatgggac
atcgtgacacgggggcttgttgccatgacaattgaaggctttgttggcttcttcatcacc
atcatgtgccagtacaatttcttccggaagccccagcgcctgcctgtctccaccaaaccc
attgaggatgacattgatgtggccaatgagaggcaccgggtcctgcgtggtgacgccgac
aatgacatgctaaagatcgagaacctcacgaaggtgtacaagtcccgcaagattggacgc
atcctggctgtggaccggctgtgtgtgggtgtgcgccctggggagtgctttgggctgctg
ggcgtcaatggtgcgggcaagaccacaacattcaagatgctgacaggggatgaaagcacc
acaggtggagaggccttcattaatggacacagcatcctgaaggagctcctgcaggtccag
cagagcttgggctactgcccccagttcgatgcgctctttgatgagctgacggcccaggag
cacctggagctctacacccgcctgcgtggcatcccctggaaggatgaggagcgggtagtc
aagtgggcactgaagaagctggagttgaccaagtatgcagacaagcctgccagcacctac
agcgggggcaacaagaggaagctatccacagccatcgcactcatcggatacccagccttc
atcttcctggatgagccaaccacagggatggaccccaaggcacggcgcttcctctggaac
ctcatcctggatgtcatcaaaacgggtcgctccgtggtgcttacatctcacagcatggag
gaatgcgaggccctctgcacccgcttggccatcatggtgaatgggcggctcaagtgtctc
ggcagcattcagcacctgaagaacaggttcggtgatggctacatgatcacagtgcgcacc
aagtccagcctcaatgtcaaggaggtggtgaggttcttcaaccgtaatttccctgaggct
gtcctcaaggagcgtcatcacaccaaggcccagtaccagctgaagtcggaccagatctca
ctggcacaggtcttcagcaagatggaacaggtggtggatgtgctgggtattgaagactac
tctgtcagccaaactacactggacaatgtgtttgtgaattttgccaagaagcaaagtgac
aacctagagcagcaggagaccagccccagcagtgtcctgcagtcacccctggagcatgtg
ctgagtctgctgcgcccccgcaccgcacccactgagctgcgggccctcatggtggaggag
caggaagacctggagactgacgacgaaggcctcatcagctttgaggaggagagggctcag
ctctccttcaacacggacactctgtgctga
DBGET
integrated database retrieval system
