Lonchura striata (white-rumped munia): 110472230
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Entry
110472230 CDS
T05897
Symbol
NISCH
Name
(RefSeq) nischarin
KO
K24095
nischarin
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
110472230 (NISCH)
Domain-containing proteins not elsewhere classified [BR:
lsr04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
110472230 (NISCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_NISCH_C
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
LRR_14
Motif
Other DBs
NCBI-GeneID:
110472230
NCBI-ProteinID:
XP_021389416
UniProt:
A0A218VBY9
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All DBs
Position
12:complement(5754675..5784171)
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AA seq
1418 aa
AA seq
DB search
MEAAAGGEDGEEPPREARVLGSELVETYTVYIIQVSVGNHQWTVKHRYSDFHDLHEKLVS
EKKIDKNLLPPKKIIGKNSKSLVEKRQKELEIYLQTLLLKFPVTAPKVLSHFLHFHLYEI
NGITAALAEELFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILD
FTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEISHCGGKLIKGLTSSKHAL
ATLSVRFSATSMKEILVPEASEFDQWEPEDALDSSSPVTAIIPTWRTLTTLDMSHNSISE
IDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLTSLEGVHTKLGNIKTLN
LAGNQLERLCGLNKLYSLVNLDLSNNKIEQIDEVKNIGSLPCLEKVMLSSNPLSIIPDYR
TKVLAQFGDRASEVCLDNIVTTEKELDTVEVLKAIQKAKEVKYKLSNSDKKISEDSRLTA
ASSKSNCSSLTVRPSSPSLPRPVSSSQEIICEETVLASSFLQSSDSTPTDHTVPQRCFEI
PDSRCQMQAPASLLASCKEYGGGHHVCLETEHCAVPDPCNTIILPFNCMSYTATNQDFTQ
HLCASIVQALQKSAPSLTENKGSPVGNSTTTDKADGYFEMGLHEGDQTFEFSTTSDAQSS
DNIPVESVDIVKILWSFSIHIHKGLRQFASCLVLTDEMLAVFEIPHQELRGNCQHIPSAL
KLTLCFPYSDLIEFGFLLPEICLTLKLKNSDHCLFIISDSQNLQDFYSCLQTCCSQHYTS
VLPSSTWYCRKANLQEFLCQLMELNCISAEDVEIKGCFPTYLVYGNKTNVQKVLHQSESA
GNSKEWSKNVLCSALYSSVYKSSDQSPCVVHPCWIFLTPQHLYIVKVDFSLLPSKWVGTE
DLGSVFKLNRIPLASLVLHPAHGATQQKGSFSDGHVLELLVGYRFVTAVFVLPHEKFHFL
RIYSLLRTLLQDVKTIIIFKASSKSDAVRNNAVEANRHRQAASFCKPHLTLSSLYPSELL
MQKITEDNQIPVHLHVSVSLQYVAGLKGRALVEFFHSNIAEVENEELRHLMWSSVLFYKT
PSVEVMACVLLSTKAIYFLLDDSFIHADEHQSDFWNKENSDCENSSFHLSCCFVLKLNDL
QSVNVGLFDQYFRITGHSADHIVTCLTRDSYNTHTFIQQLMAVLSLLARTPSPEPVDKDF
YSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDGLTNLPSLNILLYVL
AFQVNHFEGSAQNTSSLQPKTLILTSSDLFLFDEDYISYPLPEFAKEPPKRDKYQLADGR
RIRDLDRVLMGYQTYPQALTFVFDDVQNQDLMQNLTLDHFGETDSVPKGNAKQEGTRSRE
IQWYIFIPSAESREKLISLLARQWEILCGRELPLELTG
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcgggaggcgaggacggcgaggagcccccgcgggaggcccgagtgctg
ggctcggagctggtggagacatacacggtgtacattattcaggtcagtgttggcaatcat
cagtggacagtcaaacatcgttacagtgatttccatgacctgcatgaaaagcttgtttca
gagaagaaaatagataaaaatctgttacctccaaagaagataattggaaaaaattccaaa
agcctcgtggagaaaagacaaaaggaactggagatctacctgcaaactctgctgctcaag
ttccctgttactgcgccaaaagttttgtcacacttcctacactttcatttatatgagatc
aatgggatcactgctgcattggctgaagagctctttcacaaaggagagcagctcttaatg
gctggagaagttttcaccatcaggcccttgcagttgtatgctgtcactcagcagctgctg
cagggcaaacctacctgtgctaatggagatgccaaaacagatcttgggcatattctggat
ttcacttgtagactcaaatatctaaaggtcactggaacagggggaccttttggaaccagt
aacattcaggagcatctcttgccttttgatctgtctattttcaaatcacttcatcaaata
gagatcagtcattgtgggggaaagcttatcaaagggctgacttcatcaaaacatgctctg
gccacactgagtgttcgattttcagcaacatcaatgaaggaaatcctggtgcctgaggcc
tctgagtttgatcagtgggagccagaggatgcactggattcaagtagtccagtgacagca
attatcccaacctggagaactttaacaactttggatatgagtcacaatagcatctctgaa
attgatgactcagtgaaactaattccaaagattgaattcctggatttgagtcacaatggg
gtgtctctggtggaaaatttacagcatctgtacaaccttgttcacctggacttatcctac
aacaaacttacatcactagaaggtgttcacacaaaactgggaaacatcaaaactctgaat
ttagcaggaaatcaactggaaaggctgtgtggtcttaacaaactgtactcattagtcaac
ttggatctgagcaacaacaaaatagaacagattgatgaagtaaaaaatatcggcagcctg
ccatgcttagagaaggtgatgttatccagcaacccgctaagcatcatccctgattaccgg
accaaagtccttgctcagtttggagacagagcctcagaggtttgtttggataacattgtt
accacagaaaaggaactagacacagtggaagtgctaaaagctattcaaaaagcaaaggag
gtgaaatacaaactcagcaactctgataaaaagatcagtgaggactccaggctcactgct
gccagctccaaatcaaactgttcttctcttactgttcgtccttcctctccctctctgcct
cgtcctgtcagctccagccaagaaataatttgtgaagaaacagtcctagccagtagtttt
ttgcaatccagtgattcgactcctacagaccatacagttccccagagatgctttgaaatt
ccagactccagatgtcaaatgcaggcacctgcctctttattggcttcatgcaaagagtat
ggtggtggtcatcatgtgtgtttggagacagaacactgtgcagtgcctgacccctgtaac
accatcatcttgccttttaattgtatgtcctacactgccaccaaccaagattttacccag
cacctttgtgcatcaatagtgcaggctctgcagaaatctgccccctccctcacagagaat
aaagggagccctgtgggtaattccacaaccacagacaaagcagatggatattttgaaatg
ggacttcatgaaggagatcagacttttgagttcagcactacttcggatgctcaatcatct
gacaacataccagtggagagtgttgacatagtcaaaattctctggagcttttcaattcac
attcataaaggactcagacagtttgcttcctgtttggttttgaccgatgagatgctggct
gtgtttgagattcctcatcaggaattgagaggaaattgccagcacatcccttctgccttg
aaattaacactgtgttttccctacagtgatctaatagaatttggctttctcctgccagaa
atctgtttaactctgaagctgaaaaacagtgaccactgcttgtttattatttcagactcc
cagaatcttcaagacttttattcctgtttacaaacgtgttgctctcaacactacacatca
gtgttaccaagctccacatggtactgtagaaaagcaaatctccaggaatttctctgtcag
cttatggaattgaattgcatttcagccgaagatgttgaaataaaaggttgtttcccaaca
tatcttgtttatgggaataaaaccaatgttcagaaagtcttgcatcaatcagagtcagct
ggcaatagcaaggaatggtcaaagaacgttttgtgttctgcactttattcttcagtatat
aaatcttctgaccagagtccctgtgtggtccatccgtgttggatatttctaacaccccag
catttgtacatagtaaaggtggatttcagtttactgccaagtaaatgggtaggcacagaa
gacttgggaagtgtatttaagctgaatagaattccactggcatcacttgtgctgcaccca
gctcacggtgccacacagcagaaaggttcattttcggatggacacgtgctggagttgctt
gttggatacagatttgttacagcagtgtttgttctacctcatgagaaattccactttcta
agaatctacagccttctaaggacactgctccaggatgttaagactattattattttcaaa
gcttcaagcaaatcagatgctgtaagaaataatgctgtggaggcaaacagacacaggcag
gcagccagtttttgcaagcctcatctaacattgtcatccttatatccatctgagctgctt
atgcagaagataacagaagacaaccagattcctgttcaccttcatgtttctgtgtctctg
cagtatgtggctgggctgaagggaagagccctggttgaatttttccatagcaacattgca
gaggtggaaaatgaagagttgagacacctcatgtggtcttcggttctgttttacaagact
cccagtgtggaagtgatggcttgtgtgcttctctcaacaaaagctatttactttttgttg
gatgattctttcattcatgcagatgagcaccagtcagatttttggaacaaagaaaactca
gactgtgaaaacagttctttccacctctcttgctgctttgtgctaaaacttaatgacctg
cagtcagtcaatgttggtctgttcgaccagtatttccgaattactggtcattctgcagat
cacattgtcacctgcctgacaagagacagttacaacactcacaccttcatacagcagctt
atggcagtcctgtcactacttgcacgcactccttcacctgaaccagtagataaggacttc
tactctgaatttgggagtaaaaacacaggaaaaatggagaattatgaactgattcactct
agcagagtaaaatttatttatccaaatgaagaggaaattggggaccttgcttttctagtg
gcagagaagatggatggtttgaccaatcttccatccctcaacatccttctgtatgtgtta
gcatttcaagtaaatcacttcgaaggatctgctcagaacactagttcactacaacctaaa
acactgatattgaccagctctgatttgttcctctttgatgaagattatatcagttaccca
ctgcctgaatttgctaaggagccaccaaagagagacaagtatcagcttgcagatggaaga
cgaatccgggatttagatagagtactcatggggtatcagacatatccacaggcccttaca
tttgtgtttgatgatgttcagaatcaggacctgatgcagaatttaacactggatcacttt
ggagaaactgatagtgtcccaaaaggaaatgccaaacaagagggcaccaggagcagagag
atccagtggtatatttttatcccaagtgcagaaagcagggagaaattaatttcattgctt
gcaagacagtgggagatcctgtgtggtagagaattgcctttggaactcactgggtag
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