KEGG   Lonchura striata (white-rumped munia): 110472455
Entry
110472455         CDS       T05897                                 
Symbol
OGG1
Name
(RefSeq) N-glycosylase/DNA lyase isoform X2
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
lsr  Lonchura striata (white-rumped munia)
Pathway
lsr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110472455 (OGG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110472455 (OGG1)
Enzymes [BR:lsr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     110472455 (OGG1)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     110472455 (OGG1)
SSDB
Motif
Pfam: OGG_N HhH-GPD HHH
Other DBs
NCBI-GeneID: 110472455
NCBI-ProteinID: XP_021389847
LinkDB
Position
12:11657820..11659631
AA seq 362 aa
MKLRDAPSACPSLWRWLPCPPAELRLDLVLSSGQSFRWWESSPGAWTGVLGGRVWTLRQD
GDRLWYTVYGEEEEHEEERDECSAKAARLSAAETERILRDYFQLDVGLSPLYRAWGAADP
LFRKVANDFPGVRVLRQDPVECLFSFICTSNNHISRITAMIERLCQAFGRRLCCLDSRPF
HAFPSLSALTGADAEARLRALGFGYRAKFVSGSARAIAEGLGSEGLCQLRTAPYAEARRV
LCALPGVGAKVADCVCLLSLDKAEAVPVDTHVWHIARQRYGVALGGKSLTPRAYQEIGVQ
PLSAGDFFRGLWGPRAGWAQAVLFCADLRKGQKPASIRPERAEAGTAMGVGSSRDTPGGT
ET
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaagctgcgggacgccccttccgcctgcccgtccctgtggcgctggctgccgtgcccg
ccggccgagctgcgcctggacctggtgctgtcctcgggacagagcttccggtggtgggag
agcagcccgggggcgtggacgggcgtgctcgggggccgcgtctggactctgcggcaggac
ggggatcggctctggtacaccgtgtacggcgaggaggaggagcacgaagaggagcgggat
gagtgctccgccaaagcggcgaggctgagcgccgcagagacggagcggatcctgcgcgac
tacttccagctggacgtggggctgtcgcccctctaccgtgcctggggggcggccgaccct
ctgttccgcaaggtggccaatgacttcccaggggtgcgggtgctgcggcaggaccccgtc
gagtgcctcttctccttcatctgcacctccaacaaccacatttctcgcatcactgccatg
atcgagcgcctctgccaggccttcggccgccgtctctgctgcctcgattcccggcccttc
catgccttcccatccctctcggcgctcacaggtgctgatgccgaggcccggctgcgggcg
ctgggcttcgggtaccgggccaagtttgtcagcgggagtgcgcgggccatcgctgagggg
ctcggctctgaggggctgtgccagctccgcaccgcgccctatgccgaggccaggagggtg
ctgtgtgccctgcctggtgtaggtgccaaggtggccgactgcgtctgcctgttgtccctg
gacaaggcggaggcggtgcccgtggacacccacgtctggcacatcgcacggcagcgctat
ggcgtggcgctgggcggcaagagcctcaccccacgggcctaccaggagatcggcgttcaa
cctctttctgcaggcgacttcttccgggggctgtggggccctcgtgctggctgggcgcag
gcagtcctgttctgtgctgacctccgcaagggccagaagccagccagcatcaggcctgag
agagctgaggctgggacagctatgggggtaggctcctctagggacaccccaggaggaaca
gagacttga

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