Lonchura striata (white-rumped munia): 110472540
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Entry
110472540 CDS
T05897
Symbol
ARHGEF16
Name
(RefSeq) rho guanine nucleotide exchange factor 16
KO
K20688
Rho guanine nucleotide exchange factor 16
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsr04131
]
110472540 (ARHGEF16)
Membrane trafficking [BR:
lsr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110472540 (ARHGEF16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_9
SH3_1
SH3_2
SOS1_NGEF_PH
PH
RHG20_PH
ECT2_PH
SH3_16
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
110472540
NCBI-ProteinID:
XP_021389973
UniProt:
A0A218ULE3
LinkDB
All DBs
Position
21:7382784..7396801
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AA seq
690 aa
AA seq
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MSRGSSGTSVDDKTLLLEYRCHPARPEPPSPTCGPGKRSPTTAPSASPLSPLASPTSAEP
RRIVLSTDSPAALKVGTQQLIPRSLAVSSKPKNSPSRHQSCGASREPLSPDPERAAVPVL
ALEAEDEDDGGGFLKRNLRNMSYRAAMKGLGAEPEPAKAAPSLKPLPEDGSAPPDRSPGR
SKRTLGRKRVQKRGGSFKDQPRLYQEIRERGLNSVSHESDEDLLEEPSPPGAAIVVQSYR
PAQVTWSQLPEVLDSGILQRISPEERKRQEAMFEIITSEYSYMHSLSILVGHFMRSEELK
ETMTQTEHHHLFSNIGDILTVSTSFFEDLEKRHQEHLLIPDISDIVEEHASKHFNPYISY
CSNEVYQHRTLEKLLTTNPLFKDTLKQIERKPECGGLPMISFLILPMQRVTRLPLLLDTV
QQKTNARTAAYGAATRAVKAISKLVKSCNEGARAMERTEQMFTLQKQLEFGKKKPFPLIS
ASRWLRKRGELHLLLSEEAGLFRRGAGRLCHLFLFNDVLIITKKKSEESYTVMNYATLDQ
VTVEKVESSDPPSPPPGKAGGHLLRVVLEKDSEGRREEVLLSAETLSDRARWISALMHRE
KEKPDTTPKGDLSQVEITRAYLAKEADELSLQQADVVLVLGEEDGWCWGERLRDGERGWF
PQACARPITSRVAAEGNVRRMERLRIETDV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggctcctctggtacctctgtggatgacaagaccttgctcctggagtaccga
tgccacccagcgcggccagagccccccagcccgacgtgtggccctgggaagcgcagcccc
accacggctcccagtgccagcccgctgtcaccgctggcctcccccacctcggccgagccc
cgccgcatcgtgctcagcacggacagccctgccgcgctgaaggtgggaacgcagcagctc
atccccaggagcttggccgtctcctccaagcccaagaacagcccctcccggcaccagagc
tgcggggccagccgggagcccctgagccccgacccggagcgggcggccgtgcccgtgctg
gcgctggaggcggaggatgaagatgatggtggagggttcctcaagcgcaacctgaggaac
atgtcctaccgcgcggccatgaaggggctgggggccgagccggagccagccaaggccgct
ccctcgctgaaacccctgcccgaggatggcagcgccccgcccgatcgcagccccggcagg
agcaagagaaccctcgggcggaagcgagtgcagaagcgtggtggctccttcaaggaccag
ccccggctgtatcaggagatccgtgagagagggctgaactcggtcagccacgagtcagac
gaggacttgctggaggagccgtcccctccgggcgctgccatcgtggtgcagagctaccgc
ccggcccaggtcacctggagccagctcccagaggttctggattcgggcatcctgcagagg
atctcccccgaggagcgcaagcgccaggaggcaatgtttgagatcatcacttctgagtac
tcctacatgcacagcctgagcatcctggtgggccacttcatgaggtcagaggagctgaag
gagaccatgactcagacagagcaccaccacctcttctccaacattggggacatcctgaca
gtcagcacgagcttctttgaggacttggagaagcgacaccaggagcacctcctgatccct
gacatcagtgacatcgtggaggagcacgcctcgaagcacttcaacccctacatcagctac
tgctccaatgaagtctatcagcacaggacactggaaaagctgctaaccacaaacccctta
tttaaagacaccctgaaacaaattgaaaggaagccagagtgtggaggcctgccaatgatc
tcatttctcattctgcccatgcagagggtaacacggcttcctctgctcttagataccgtc
cagcaaaaaacaaacgcgcgcaccgcagcgtacggagctgccacccgtgctgtgaaggcc
atcagcaagctggtcaagagctgcaatgagggagctcgggctatggagaggacagagcag
atgttcaccttgcagaaacagctggaatttgggaagaagaagccgttcccgctgatctcg
gcgtcgcggtggctgcggaagcggggcgagctgcacctgctgctctccgaggaggccggg
ctcttccgccgcggcgccggccgcctctgccacctcttcctcttcaacgacgtcctcatc
atcaccaagaagaagagcgaggagagctacacggtcatgaactacgccacgctggaccag
gtcaccgtggagaaggtggagagctcagacccaccctcccctcctcctggcaaggctggt
gggcacctgctgcgagtggtgctggagaaggacagcgagggccggcgggaggaggtgctg
ctgtcggcagagacgctgagtgaccgggcccggtggatctcggcgctgatgcacagggag
aaggaaaagcctgacaccactcccaaaggagacctgagccaggtggagatcacccgtgcc
tacctggccaaggaggcggacgagctgtccctgcagcaggcagatgttgtcctggtgctg
ggggaagaggacggctggtgctggggggagcgtctgcgggacggggagcggggctggttc
ccccaggcctgtgcccggcccatcacgagccgcgtggccgccgagggcaacgtgcggcgc
atggagcggctgcgcatcgagaccgacgtgtag
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