Lonchura striata (white-rumped munia): 110472609
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Entry
110472609 CDS
T05897
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110472609 (DDX4)
Enzymes [BR:
lsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110472609 (DDX4)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110472609 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110472609
NCBI-ProteinID:
XP_031363341
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Position
Z:42398874..42417142
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AA seq
594 aa
AA seq
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MAKGSDPANVDFGVAMSCLTNVIPFCDQVTHLVDDGNALDVVYLDFSKAFDITSQSIYLL
SAYGLLGIGGEEPTGAVLGELHGVLYQLILFIFMTGGRGRQIPQSGTPESRERGILTDGA
GPKVTYVPPPPPDDEQAIFARYQTGMNFDKYDENIVQVSGLDPPAALMSFADTNMCDTLT
MNISKAGYCKPTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLVPVVAQMMRDGVTASAF
KEQQEPECIITAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTDYSIRQVKQGCNILC
ATPGRLLDIIGRGKIGLHNVKYLVLDEADRMLDMGFGADMKKLVSFPGMPQKEKRQTLMF
SATFPEEVQRLACEFLKPDFLFVVVGHAGGACSDVQQNILQVSQYFKRDKLIEILHSTGN
ERTLVFVDTKKKADFIACFLCQENIPATSIHGDREQREREIALRDFRSGKCPVLVATSVA
ARGLDIENVQHVINFDLPSTIEEYVHRIGRTGRCGNIGKAVGFFDNNSDGHLAQPLIKVL
SDAQQKVPVWLMEVAFETEGGRLPVNTQQKKYGGNMNRRKVELDCSAREIESWD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggatcagacccagccaacgtggattttggagtggccatgtcctgcttaact
aatgtgatacccttttgtgaccaagtgacccatctagtggatgacgggaatgctctggat
gttgtctacctggacttcagcaaagcctttgacatcacctcccaaagcatatacctgctg
tcagcttatggcttgctgggcattggtggagaagaacccacaggtgctgtactaggagaa
cttcatggtgtcctgtaccagctgattctctttattttcatgacaggtggtagaggtagg
cagatacctcagtctggaactcctgagtctagagaaaggggaatactcacagacggtgca
ggtccaaaggtgacttacgtgccccctcctccacctgatgatgagcaagccatatttgca
cgttatcagacaggaatgaattttgacaagtatgatgaaaacattgttcaggtgtcagga
ctggaccctccagcagcattaatgagttttgcagacaccaacatgtgtgatactttaact
atgaacatttctaaagctggatactgtaagcctactccagtgcagaagtacagcattcct
attatactggcaggacgggatttaatggcatgtgcccagacaggatcaggaaaaactgca
gcgtttcttgtaccagttgtggcccaaatgatgagggatggcgtaactgccagtgcattt
aaagagcagcaagaaccagaatgtattattactgccccaactagagaactgataaatcag
attttcctagaagcaagaaaatttgtgtatggaacttgtataaggcctgttgtaatctat
ggaggtacacaaacagactattcgattcgtcaggtaaagcaaggctgtaatatactgtgt
gccactccaggaaggcttctagacatcattggaagaggaaagattggtttgcataatgtg
aaatatttggtgctagatgaagcagaccgcatgcttgatatgggttttggtgcagatatg
aagaaattggtatctttcccgggcatgccacaaaaagagaaacgccaaacgctaatgttt
agtgccacttttcctgaagaagttcagaggctagcttgtgaatttttaaaacctgatttt
ttatttgttgttgtcggacatgcgggtggagcatgcagtgatgttcagcaaaatattctt
caagtttctcagtatttcaagagggataaactgatagaaattctacacagcacaggtaat
gaacgaaccctggtctttgtggacacaaagaaaaaagcagacttcattgcatgctttctt
tgtcaagaaaacataccagccactagtatccatggagatagagaacaaagagagagagaa
atagcacttcgggattttcgttctggaaaatgtccagttcttgtggcaacctcagtggca
gcaagaggtctggacattgaaaacgttcagcacgttattaattttgatcttccttccacc
attgaagagtatgtacatcgaattgggcgaactggtcgttgtggaaatataggaaaagct
gttggcttctttgataacaattcagatggtcatcttgcacaacctttaattaaagtgctt
tcagatgctcagcagaaagttcctgtttggctgatggaagttgcttttgagactgaagga
ggacggctcccagttaatacccaacaaaagaaatacggaggcaacatgaatagaagaaaa
gtagagctggactgttcagcaagagaaattgaatcatgggattaa
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