Lonchura striata (white-rumped munia): 110472688
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Entry
110472688 CDS
T05897
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
lsr
Lonchura striata (white-rumped munia)
Pathway
lsr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110472688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsr03019
]
110472688
Messenger RNA biogenesis [BR:
lsr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110472688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Motif
Other DBs
NCBI-GeneID:
110472688
NCBI-ProteinID:
XP_021390286
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All DBs
Position
4A:complement(18652418..18659471)
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AA seq
475 aa
AA seq
DB search
MSQFSFGAAAPGGAFGLGAPRAAATAAAAGFSFSAPASTGFSFGSAAPAAGGGQPAGLFS
FSRPGTAAQPAGFSFGSAGAAPAAPAAAAFPLGANTPKVNFGASTTTPAPGITGGFSFAA
PVATSTPSSQAAAPSGFAFGSGGSSSSSTAPSGTTGGFTFSSGTTTQAGTAGFSIGTAAP
QATSAGLSFGTAPAAAASTSTATLAAASPAAAPFSLGGQPTGLTFALPSTAATSTTTATT
TTSTSQAPILSFGTKLGVTSTAASTASTTSTTSVLGSTGPSLFASVATSSAPASSSTSGL
SLGATSTGSTGTASLGTLGFGLLKGDRAWESPHVGAGASLGAVPSLCQPGLQLWQLMLMA
HSWCDCEQALQVGFDHSDLGSCVLCSYKLAENIDAQLKRMAQDLKDIIDHLNTSGGPADS
SDPLQQICKILNAHMDSLQWIDQNSAVLQRKVEEVTKVCESRRKEQERSFRITFD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcagcttcggggcggccgcgcccggcggcgccttcggcctgggcgcgccc
cgcgccgccgccaccgcggccgccgccggcttctccttctccgcgcccgcctccaccggc
ttcagcttcggcagcgccgcgccggcggcgggcggcggccagcccgccgggctcttctcc
ttcagccggccgggcacggccgcgcagcccgcgggcttcagcttcggctcggccggcgcg
gcccccgcggccccggcggccgccgccttcccgctgggggcaaacacaccaaaagtgaac
tttggagccagcaccaccactccagctcctgggatcacggggggcttctcttttgctgcc
cctgtggcaaccagcacgccgtcgagtcaggcagcagccccgtctggctttgcctttggc
tcaggaggcagcagcagcagcagcacggctccgtctgggacaacaggaggcttcaccttc
tccagtggcaccacgactcaggcggggacggccgggttcagcatcggcaccgcggctccg
caggcgacgtccgcagggctgagctttggcacggcccctgcggctgctgccagcaccagc
acggccaccctggcagctgccagcccggcagcagcgcccttcagcctcggggggcagccc
acaggtctgacctttgcactgccttcaacagcagccaccagtacaaccacagcaacaacg
accacaagcaccagccaggcacccatcctgtcctttggaaccaagcttggagtcacatcc
acagctgccagcacggcctccaccaccagcaccacctcagtgctgggctccacggggccc
tccttgtttgcatctgtggcaacttcctcagccccagcctcctccagcacctcgggcctc
tcactgggtgccacttccactggttccactgggacagccagtctggggacacttggcttt
ggattactcaagggagacagagcttgggagtcccctcatgtgggtgctggagcctccctg
ggtgctgttcccagtctctgccagcctgggctgcagctgtggcagctgatgctgatggcc
cacagctggtgtgactgtgagcaggccctccaagttggctttgaccattctgatcttggt
tcctgtgtgctctgcagctacaaactggctgaaaacatcgatgctcagctgaagcgcatg
gcacaagatctgaaggacattattgatcacttgaatacatcaggaggcccagcagactcg
agtgacccgcttcagcagatctgtaaaattctgaatgcacacatggattccctgcagtgg
attgaccagaattcagctgtgctgcagaggaaggtggaagaggtgaccaaggtttgtgag
agtcgccgcaaggagcaggagcgcagctttcggatcacctttgattga
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