Lonchura striata (white-rumped munia): 110472785
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Entry
110472785 CDS
T05897
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
lsr
Lonchura striata (white-rumped munia)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lsr01002
]
110472785
Peptidases and inhibitors [BR:
lsr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
110472785
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Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110472785
NCBI-ProteinID:
XP_031361238
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Position
7:complement(18886617..18915007)
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AA seq
1036 aa
AA seq
DB search
MRFRMKSLHSPTYLFILDEDCILEIAFLLDSSENAKDYNHEQQKKFVLQTVDRMQSLQLS
SGRTLRWRMALLQYSSTVFIEQTFHDWKGPEAFKSHIAPITHIGHGTYTTYAITNLTQLY
MSEGTLGSVKVAVLFTDGVDHPRNPDIFAATADAKHQGIVFFTMGMTKVAEEDSNAAKLR
LLASVPASRFVFNLQEKETVEKVLKEMKDLSEEECPQVDTCNCEKGERGLPGPAGKKGRT
GDDGAPGLKGAKGDPGLNGIPGRDGIEGKAGHKGEKGERGECGIPGIKGDRGPEGPVGPR
GVRGIQGLQGQSGDQGPEGLQGSKGERGLPGPPGLPGETGIGLPGPKGDTGLTGRPGPVG
PPGVGEPGFMGPQGPQGVQGERGPPGEGLPGAKGDRGFDGPKGPRGLPGISIKGEKGDCG
PPGLPGSVGLPGIGIQGEKGVEGPKGPPGSRGLPGQGIPGPKGEQGLPGETGVPGERGIG
EPGSKGDPGPSGLAGLPGLPGEDGAPGQKGEPGLPGLRGPEGVPGIGIQGEKGDQGQRGI
RGLTGPTGVPGPVGPKGEPGVPGRLGMPGPPGRSVPGPKGDIGLPGLAGPIGEPGFGLPG
AKGDQGLPGPPGPFGQKGDGYPGPPGLPGLPGIPGEQGPDGVGLPGPKGDPGSRGPVGPA
GPPGKGLPGPKGTIGRPGPPGSLGPPGEGIQGTKGEQGIQGMPGPRGPPGDGLLGEKGDR
GATGDKGKKGEKGDAGDPGLSGEPGKTGPKGDQGLTREDIIKLIKEICGCSIKCKEIPME
LVFVIDSSESVGPENFEIIKDFVTALVDRVTVGRNATRIGLVLYSLEVRLEFGLNKYPTH
QDVKRAIRKMQYMGEGTYTGTAIHKAAQEGFSGARAGVRKVAIVLTDGQTDKREAVKLDL
VVQEAHAANIEMYAIGVLNTSDPTQVEFVRELNLIASDPDGEHMYLIDDFNTLSALESKL
VNQFCEDEHGTLVHNHNENGASISGQSFHSVSPSSLHYILQKNNINRQSLSAQTLRVSTV
ESPLNLGHLPQPLAPV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgagatttagaatgaagtcactccactcacctacatatctgtttattctagatgaagat
tgcattctggaaattgcttttttactggacagctctgaaaatgctaaggactataatcat
gaacagcagaaaaaatttgtactgcaaacagtggacagaatgcaaagtctgcagcttagt
tctggacgtaccctgcgctggaggatggccttacttcaatacagcagcactgtttttata
gagcaaactttccatgactggaaaggtcctgaagcattcaaatcccacattgctcccatc
acccacataggtcatggcacctacacaacttatgctataactaatcttacccagctctac
atgtctgaagggactttgggtagtgtaaaagtagccgtgcttttcactgatggagtggat
catccaagaaacccagatatttttgcagctacagctgatgctaaacaccaaggaattgta
tttttcacaatgggaatgaccaaagtggctgaggaggatagcaatgctgccaagctccgg
ctcctggccagtgtcccagcatccaggttcgttttcaacctccaggagaaagaaactgtg
gagaaggttctcaaagaaatgaaagacctgtctgaggaagagtgtccccaggttgacaca
tgtaactgtgagaagggggaaagaggccttcctggtcctgctggtaaaaagggtcgcact
ggggacgatggagctccaggcctgaaaggagcaaagggggacccaggtctgaatggaatc
ccaggacgagatggaatagaggggaaagctggacataaaggagagaagggtgaaagaggt
gaatgtggaatcccaggaataaaaggagacagaggtcctgaaggtccagtaggccccaga
ggagtaagagggatacagggtctacaaggacaatctggagatcaagggcctgaaggcctg
caaggatcaaagggtgaaagaggtcttcctgggccacctggcttgcctggagagactgga
ataggactaccaggcccaaagggtgacactggcttgacaggaagaccgggccctgttggc
ccacctggagttggtgagccaggatttatggggcctcaaggaccacaaggtgttcaagga
gaaagaggtccaccaggagaagggcttccaggagcaaagggagatcgtggctttgatgga
ccaaaaggccctcgtggacttccaggcatcagcataaaaggtgaaaagggtgactgtggt
cctcctggtttaccaggatcagttggattacctggaattggaattcaaggagaaaaggga
gtggagggcccaaaaggaccacctggctctagagggctaccaggacaggggatacctgga
ccaaagggtgaacaaggcttgccaggagagactggagtgccaggagaaagaggtattgga
gaacctggttctaagggtgatccagggccttcaggactggcaggtctgcctggtcttcca
ggagaagatggagcccctggacaaaagggtgaaccagggttgcctggtcttagaggtcct
gaaggtgttccagggattggaatacagggggaaaagggagatcaaggacagagaggaata
cgtggattaacaggaccaacaggagtgcctggacctgttggacctaaaggggagcctggt
gtaccaggacgtcttgggatgccaggccctcctggaagatctgtgcctggaccaaagggt
gacattggcttacctggtcttgctggaccaattggagaaccaggttttggtcttccaggg
gcaaagggtgaccaaggccttccaggaccccctgggccttttgggcaaaaaggagatggt
tatcctggcccacctggcttgccaggcctccctggaattcccggtgagcaaggcccagat
ggagttggactgccagggcctaagggtgatcctggtagtagaggaccagttggccctgct
ggtcccccaggaaaaggcttgccaggaccaaaaggaaccataggacgcccagggccacct
ggctctctgggacctcctggtgaaggtattcaaggaactaagggggaacaaggtattcaa
ggaatgccaggaccacgaggcccccctggagatggacttctgggagagaagggagatcgt
ggagccacaggtgacaaggggaaaaaaggagaaaaaggtgatgcgggcgaccctggttta
tctggagaacctggcaaaactggaccaaagggagaccaaggcctaacaagagaagacata
atcaaattaattaaagagatatgcggttgcagtattaaatgtaaggaaattcctatggag
cttgtatttgtgattgacagctctgagagtgtgggaccagaaaattttgagattatcaaa
gactttgtaactgctttagtagacagagtaactgtaggcagaaatgctaccagaattggc
cttgtgttatacagtttagaagttcgactagaatttggtctcaacaagtatccaacccac
caggatgttaagagagcaattaggaaaatgcaatacatgggagaaggcacttacacagga
actgctatccacaaagcagcccaggaaggattttctggtgctcgagcaggcgtgcggaaa
gtagctattgtgctaacagatggtcaaacagacaagagagaagctgtaaaactagatctt
gttgttcaagaggctcatgcagcaaacatcgaaatgtatgcaataggagtcctaaatact
tcagatccaacacaggttgagtttgtgcgtgagctaaatttgattgcttcagacccagat
ggagaacacatgtatctcattgatgactttaacactctctcagctctggagtccaaatta
gtcaatcaattttgtgaagatgaacatggcaccttagtacacaaccataatgaaaatggt
gcaagtataagtgggcaatccttccattcagtatctccaagttctctacattacatactt
cagaagaataatattaatagacaatcactttcagcacagacacttagagtatctacagta
gaaagtcctctgaatcttggccatcttcctcaaccattagctccggtatga
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